RNA–Protein interactions for RNA: ENST00000368657.7

TUBE1-201, Transcript of tubulin epsilon 1, humanhuman

TSL 2

Gene TUBE1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-201ENST00000368657 MYOM2P54296 1465 aa16.6■□□□□ 0.25
TUBE1-201ENST00000368657 C1orf167Q5SNV9 1468 aa16.6■□□□□ 0.25
TUBE1-201ENST00000368657 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.59■□□□□ 0.25
TUBE1-201ENST00000368657 ORAI2Q96SN7 254 aa16.58■□□□□ 0.24
TUBE1-201ENST00000368657 RNF39Q9H2S5 420 aa16.58■□□□□ 0.24
TUBE1-201ENST00000368657 ADGRL3Q9HAR2 1447 aa16.58■□□□□ 0.24
TUBE1-201ENST00000368657 MYO5BQ9ULV0 1848 aa16.58■□□□□ 0.24
TUBE1-201ENST00000368657 MARF1Q9Y4F3 1742 aaKnown RBP16.57■□□□□ 0.24
TUBE1-201ENST00000368657 TMEM131LA2VDJ0 1609 aa16.57■□□□□ 0.24
TUBE1-201ENST00000368657 CHGAP10645 457 aaKnown RBP16.57■□□□□ 0.24
TUBE1-201ENST00000368657 PPP1R1BQ9UD71 204 aaPredicted RBP16.56■□□□□ 0.24
TUBE1-201ENST00000368657 SLIT2O94813 1529 aa16.55■□□□□ 0.24
TUBE1-201ENST00000368657 VPS72Q15906 364 aa16.55■□□□□ 0.24
TUBE1-201ENST00000368657 MYOM3Q5VTT5 1437 aa16.54■□□□□ 0.24
TUBE1-201ENST00000368657 NINLQ9Y2I6 1382 aa16.54■□□□□ 0.24
TUBE1-201ENST00000368657 GCC2Q8IWJ2 1684 aa16.53■□□□□ 0.24
TUBE1-201ENST00000368657 NPHP3Q7Z494 1330 aa16.52■□□□□ 0.24
TUBE1-201ENST00000368657 SPON1Q9HCB6 807 aa16.52■□□□□ 0.24
TUBE1-201ENST00000368657 XRN1Q8IZH2 1706 aaKnown RBP16.52■□□□□ 0.24
TUBE1-201ENST00000368657 DISP2A7MBM2 1401 aa16.51■□□□□ 0.23
TUBE1-201ENST00000368657 EZH2Q15910 746 aaKnown RBP16.5■□□□□ 0.23
TUBE1-201ENST00000368657 CCDC9Q9Y3X0 531 aaKnown RBP16.5■□□□□ 0.23
TUBE1-201ENST00000368657 KCNQ2O43526 872 aa16.48■□□□□ 0.23
TUBE1-201ENST00000368657 CAMKK2Q96RR4 588 aa16.48■□□□□ 0.23
TUBE1-201ENST00000368657 CACNB1Q02641 598 aaPredicted RBP16.47■□□□□ 0.23
TUBE1-201ENST00000368657 NBPF8Q3BBV2 869 aa16.47■□□□□ 0.23
TUBE1-201ENST00000368657 NBPF14Q5TI25 921 aa16.47■□□□□ 0.23
TUBE1-201ENST00000368657 RGPD1P0DJD0 1748 aa16.47■□□□□ 0.23
TUBE1-201ENST00000368657 A0A0G2JS52 829 aa16.46■□□□□ 0.23
TUBE1-201ENST00000368657 MYT1Q01538 1121 aa16.46■□□□□ 0.23
TUBE1-201ENST00000368657 METP08581 1390 aa16.45■□□□□ 0.22
TUBE1-201ENST00000368657 NALCNQ8IZF0 1738 aa16.45■□□□□ 0.22
TUBE1-201ENST00000368657 LRPPRCP42704 1394 aaKnown RBP16.44■□□□□ 0.22
TUBE1-201ENST00000368657 PARD3Q8TEW0 1356 aa16.44■□□□□ 0.22
TUBE1-201ENST00000368657 ESCO1Q5FWF5 840 aa16.43■□□□□ 0.22
TUBE1-201ENST00000368657 FOXO3O43524 673 aa16.42■□□□□ 0.22
TUBE1-201ENST00000368657 ABCC5O15440 1437 aa16.42■□□□□ 0.22
TUBE1-201ENST00000368657 ANKRD30AQ9BXX3 1397 aa16.41■□□□□ 0.22
TUBE1-201ENST00000368657 CEP350Q5VT06 3117 aa16.41■□□□□ 0.22
TUBE1-201ENST00000368657 PXDNQ92626 1479 aa16.41■□□□□ 0.22
TUBE1-201ENST00000368657 FAM98CQ17RN3 349 aaKnown RBP16.4■□□□□ 0.22
TUBE1-201ENST00000368657 PTPN23Q9H3S7 1636 aa16.39■□□□□ 0.21
TUBE1-201ENST00000368657 HAP1P54257 671 aaPredicted RBP16.39■□□□□ 0.21
TUBE1-201ENST00000368657 GIGYF1O75420 1035 aaPredicted RBP16.38■□□□□ 0.21
TUBE1-201ENST00000368657 APBA3O96018 575 aa16.38■□□□□ 0.21
TUBE1-201ENST00000368657 XPCQ01831 940 aaPredicted RBP16.38■□□□□ 0.21
TUBE1-201ENST00000368657 NRXN3Q9Y4C0 1643 aa16.37■□□□□ 0.21
TUBE1-201ENST00000368657 ADGRL2O95490 1459 aa16.37■□□□□ 0.21
TUBE1-201ENST00000368657 FAM182BQ5T319 152 aa16.37■□□□□ 0.21
TUBE1-201ENST00000368657 SPATA31A3Q5VYP0 1347 aa16.37■□□□□ 0.21
TUBE1-201ENST00000368657 FAM196AQ6ZSG2 479 aa16.36■□□□□ 0.21
TUBE1-201ENST00000368657 CAMTA1Q9Y6Y1 1673 aa16.36■□□□□ 0.21
TUBE1-201ENST00000368657 NWD2Q9ULI1 1742 aa16.36■□□□□ 0.21
TUBE1-201ENST00000368657 TRIM37O94972 964 aa16.35■□□□□ 0.21
TUBE1-201ENST00000368657 USP32Q8NFA0 1604 aa16.34■□□□□ 0.21
TUBE1-201ENST00000368657 CROCC2H7BZ55 1655 aa16.34■□□□□ 0.21
TUBE1-201ENST00000368657 CHIC2Q9UKJ5 165 aa16.34■□□□□ 0.21
TUBE1-201ENST00000368657 ADGRB2O60241 1585 aa16.34■□□□□ 0.21
TUBE1-201ENST00000368657 TNS1Q9HBL0 1735 aaKnown RBP16.33■□□□□ 0.21
TUBE1-201ENST00000368657 CHD4Q14839 1912 aa16.33■□□□□ 0.21
TUBE1-201ENST00000368657 UTRNP46939 3433 aa16.33■□□□□ 0.2
TUBE1-201ENST00000368657 DAPK1P53355 1430 aa16.32■□□□□ 0.2
TUBE1-201ENST00000368657 C1QBPQ07021 282 aaKnown RBP16.32■□□□□ 0.2
TUBE1-201ENST00000368657 FAM83GA6ND36 823 aa16.31■□□□□ 0.2
TUBE1-201ENST00000368657 ROBO2Q9HCK4 1378 aa16.3■□□□□ 0.2
TUBE1-201ENST00000368657 ZNF326Q5BKZ1 582 aaKnown RBP16.3■□□□□ 0.2
TUBE1-201ENST00000368657 KRT28Q7Z3Y7 464 aa16.29■□□□□ 0.2
TUBE1-201ENST00000368657 HFM1A2PYH4 1435 aa16.28■□□□□ 0.2
TUBE1-201ENST00000368657 PLCH1Q4KWH8 1693 aa16.27■□□□□ 0.2
TUBE1-201ENST00000368657 IQGAP3Q86VI3 1631 aa16.27■□□□□ 0.2
TUBE1-201ENST00000368657 PSME1Q06323 249 aa16.27■□□□□ 0.2
TUBE1-201ENST00000368657 CABLES1Q8TDN4 633 aa16.27■□□□□ 0.2
TUBE1-201ENST00000368657 SYT17Q9BSW7 474 aa16.26■□□□□ 0.19
TUBE1-201ENST00000368657 BTG4Q9NY30 223 aa16.26■□□□□ 0.19
TUBE1-201ENST00000368657 RREB1Q92766 1687 aa16.25■□□□□ 0.19
TUBE1-201ENST00000368657 CCDC144AA2RUR9 1427 aa16.25■□□□□ 0.19
TUBE1-201ENST00000368657 SPATA31A5Q5VU36 1347 aa16.24■□□□□ 0.19
TUBE1-201ENST00000368657 SPATA31A7Q8IWB4 1347 aa16.24■□□□□ 0.19
TUBE1-201ENST00000368657 ANKRD50Q9ULJ7 1429 aa16.24■□□□□ 0.19
TUBE1-201ENST00000368657 NUP188Q5SRE5 1749 aa16.23■□□□□ 0.19
TUBE1-201ENST00000368657 PRAG1Q86YV5 1406 aa16.23■□□□□ 0.19
TUBE1-201ENST00000368657 SLC4A2P04920 1241 aa16.23■□□□□ 0.19
TUBE1-201ENST00000368657 KANK4Q5T7N3 995 aaPredicted RBP16.22■□□□□ 0.19
TUBE1-201ENST00000368657 E9PCH4 1651 aa16.21■□□□□ 0.19
TUBE1-201ENST00000368657 CDC42BPGQ6DT37 1551 aa16.21■□□□□ 0.18
TUBE1-201ENST00000368657 FHDC1Q9C0D6 1143 aaPredicted RBP16.2■□□□□ 0.18
TUBE1-201ENST00000368657 U3KPZ7 1027 aaPredicted RBP16.2■□□□□ 0.18
TUBE1-201ENST00000368657 TNS3Q68CZ2 1445 aa16.19■□□□□ 0.18
TUBE1-201ENST00000368657 NUTM2FA1L443 756 aa16.19■□□□□ 0.18
TUBE1-201ENST00000368657 PLEKHG5O94827 1062 aa16.19■□□□□ 0.18
TUBE1-201ENST00000368657 PTGER2P43116 358 aa16.19■□□□□ 0.18
TUBE1-201ENST00000368657 THSD7AQ9UPZ6 1657 aa16.18■□□□□ 0.18
TUBE1-201ENST00000368657 ARHGEF10O15013 1369 aa16.18■□□□□ 0.18
TUBE1-201ENST00000368657 VGFO15240 615 aaPredicted RBP16.18■□□□□ 0.18
TUBE1-201ENST00000368657 LMOD2Q6P5Q4 547 aa16.18■□□□□ 0.18
TUBE1-201ENST00000368657 NRKQ7Z2Y5 1582 aa16.17■□□□□ 0.18
TUBE1-201ENST00000368657 PDE3BQ13370 1112 aa16.17■□□□□ 0.18
TUBE1-201ENST00000368657 NRAPQ86VF7 1730 aa16.16■□□□□ 0.18
TUBE1-201ENST00000368657 SBNO1A3KN83 1393 aa16.16■□□□□ 0.18
TUBE1-201ENST00000368657 NEXMIFQ5QGS0 1516 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms