RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 YTHDC2Q9H6S0 1430 aaKnown RBP14.25□□□□□ -0.13
TPM3-212ENST00000368533 QRICH2Q9H0J4 1663 aa14.24□□□□□ -0.13
TPM3-212ENST00000368533 RALBP1Q15311 655 aa14.24□□□□□ -0.13
TPM3-212ENST00000368533 ALKQ9UM73 1620 aa14.24□□□□□ -0.13
TPM3-212ENST00000368533 EVC2Q86UK5 1308 aa14.24□□□□□ -0.13
TPM3-212ENST00000368533 AMER1Q5JTC6 1135 aaPredicted RBP14.24□□□□□ -0.13
TPM3-212ENST00000368533 PNISRQ8TF01 805 aaKnown RBP14.23□□□□□ -0.13
TPM3-212ENST00000368533 PTPRMP28827 1452 aa14.22□□□□□ -0.13
TPM3-212ENST00000368533 PAK3O75914 559 aaPredicted RBP14.22□□□□□ -0.13
TPM3-212ENST00000368533 FER1L4A9Z1Z3 1794 aa14.22□□□□□ -0.13
TPM3-212ENST00000368533 CDK19Q9BWU1 502 aa14.22□□□□□ -0.13
TPM3-212ENST00000368533 TMEM2Q9UHN6 1383 aa14.22□□□□□ -0.13
TPM3-212ENST00000368533 NLRP13Q86W25 1043 aa14.21□□□□□ -0.13
TPM3-212ENST00000368533 KDM5AP29375 1690 aaKnown RBP14.21□□□□□ -0.13
TPM3-212ENST00000368533 SETBP1Q9Y6X0 1596 aa14.21□□□□□ -0.13
TPM3-212ENST00000368533 PARD3Q8TEW0 1356 aa14.21□□□□□ -0.14
TPM3-212ENST00000368533 C3P01024 1663 aa14.21□□□□□ -0.14
TPM3-212ENST00000368533 NSD3Q9BZ95 1437 aa14.2□□□□□ -0.14
TPM3-212ENST00000368533 PPP2R1AP30153 589 aa14.2□□□□□ -0.14
TPM3-212ENST00000368533 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.2□□□□□ -0.14
TPM3-212ENST00000368533 EID1Q9Y6B2 187 aa14.2□□□□□ -0.14
TPM3-212ENST00000368533 ARHGEF28Q8N1W1 1705 aaKnown RBP14.2□□□□□ -0.14
TPM3-212ENST00000368533 ZFYVE9O95405 1425 aa14.2□□□□□ -0.14
TPM3-212ENST00000368533 CABP1Q9NZU7 370 aa14.19□□□□□ -0.14
TPM3-212ENST00000368533 MYOM1P52179 1685 aa14.19□□□□□ -0.14
TPM3-212ENST00000368533 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.19□□□□□ -0.14
TPM3-212ENST00000368533 TULP4Q9NRJ4 1543 aa14.19□□□□□ -0.14
TPM3-212ENST00000368533 FBLN1P23142 703 aa14.19□□□□□ -0.14
TPM3-212ENST00000368533 GGNBP2Q9H3C7 697 aa14.18□□□□□ -0.14
TPM3-212ENST00000368533 RIMS1Q86UR5 1692 aaKnown RBP14.18□□□□□ -0.14
TPM3-212ENST00000368533 HDGFP51858 240 aaKnown RBP14.17□□□□□ -0.14
TPM3-212ENST00000368533 B4GALNT3Q6L9W6 998 aa14.17□□□□□ -0.14
TPM3-212ENST00000368533 CCDC146Q8IYE0 955 aa14.17□□□□□ -0.14
TPM3-212ENST00000368533 MORC1Q86VD1 984 aa14.17□□□□□ -0.14
TPM3-212ENST00000368533 UBR1Q8IWV7 1749 aa14.16□□□□□ -0.14
TPM3-212ENST00000368533 PPP4R2Q9NY27 417 aa14.16□□□□□ -0.14
TPM3-212ENST00000368533 ZBED9Q6R2W3 1325 aa14.16□□□□□ -0.14
TPM3-212ENST00000368533 THEMISQ8N1K5 641 aaPredicted RBP14.15□□□□□ -0.14
TPM3-212ENST00000368533 ADAMTS8Q9UP79 889 aa14.15□□□□□ -0.14
TPM3-212ENST00000368533 BRD4O60885 1362 aaPredicted RBP14.15□□□□□ -0.14
TPM3-212ENST00000368533 SBNO2Q9Y2G9 1366 aa14.14□□□□□ -0.15
TPM3-212ENST00000368533 AMOTL2Q9Y2J4 779 aa14.14□□□□□ -0.15
TPM3-212ENST00000368533 ROBO2Q9HCK4 1378 aa14.13□□□□□ -0.15
TPM3-212ENST00000368533 PLEKHG5O94827 1062 aa14.13□□□□□ -0.15
TPM3-212ENST00000368533 A0A1W2PP64 1363 aa14.13□□□□□ -0.15
TPM3-212ENST00000368533 NRXN3Q9Y4C0 1643 aa14.13□□□□□ -0.15
TPM3-212ENST00000368533 MYO3AQ8NEV4 1616 aa14.13□□□□□ -0.15
TPM3-212ENST00000368533 LRPPRCP42704 1394 aaKnown RBP14.13□□□□□ -0.15
TPM3-212ENST00000368533 PPM1GO15355 546 aaPredicted RBP14.13□□□□□ -0.15
TPM3-212ENST00000368533 WDR43Q15061 677 aaKnown RBP eCLIP14.13□□□□□ -0.15
TPM3-212ENST00000368533 NOP58Q9Y2X3 529 aaKnown RBP14.12□□□□□ -0.15
TPM3-212ENST00000368533 SOX12O15370 315 aa14.12□□□□□ -0.15
TPM3-212ENST00000368533 SLC24A1O60721 1099 aa14.11□□□□□ -0.15
TPM3-212ENST00000368533 ZRANB1Q9UGI0 708 aa14.11□□□□□ -0.15
TPM3-212ENST00000368533 ADAMTS13Q76LX8 1427 aa14.11□□□□□ -0.15
TPM3-212ENST00000368533 NLRP1Q9C000 1473 aa14.1□□□□□ -0.15
TPM3-212ENST00000368533 WASLO00401 505 aaPredicted RBP14.1□□□□□ -0.15
TPM3-212ENST00000368533 PMFBP1Q8TBY8 1022 aa14.1□□□□□ -0.15
TPM3-212ENST00000368533 CGNL1Q0VF96 1302 aa14.09□□□□□ -0.15
TPM3-212ENST00000368533 NEUROD2Q15784 382 aa14.09□□□□□ -0.15
TPM3-212ENST00000368533 CDCA7LQ96GN5 454 aa14.09□□□□□ -0.15
TPM3-212ENST00000368533 KCNA6P17658 529 aa14.09□□□□□ -0.15
TPM3-212ENST00000368533 NUDT16Q96DE0 195 aaKnown RBP14.09□□□□□ -0.15
TPM3-212ENST00000368533 ABCC11Q96J66 1382 aa14.09□□□□□ -0.15
TPM3-212ENST00000368533 MTHFSP49914 203 aa14.08□□□□□ -0.15
TPM3-212ENST00000368533 PTPRUQ92729 1446 aa14.08□□□□□ -0.15
TPM3-212ENST00000368533 HSPA2P54652 639 aa14.08□□□□□ -0.16
TPM3-212ENST00000368533 ERICH6BQ5W0A0 696 aa14.07□□□□□ -0.16
TPM3-212ENST00000368533 HDGFL2Q7Z4V5 671 aaPredicted RBP14.07□□□□□ -0.16
TPM3-212ENST00000368533 TERF2IPQ9NYB0 399 aa14.07□□□□□ -0.16
TPM3-212ENST00000368533 SETD1AO15047 1707 aaKnown RBP14.07□□□□□ -0.16
TPM3-212ENST00000368533 ANKRD36BQ8N2N9 1353 aa14.07□□□□□ -0.16
TPM3-212ENST00000368533 PLEKHG1Q9ULL1 1385 aa14.07□□□□□ -0.16
TPM3-212ENST00000368533 PRR36Q9H6K5 1346 aa14.06□□□□□ -0.16
TPM3-212ENST00000368533 NME9Q86XW9 330 aa14.06□□□□□ -0.16
TPM3-212ENST00000368533 FYB1O15117 783 aa14.06□□□□□ -0.16
TPM3-212ENST00000368533 EIF5BO60841 1220 aaKnown RBP14.06□□□□□ -0.16
TPM3-212ENST00000368533 ANKLE2Q86XL3 938 aa14.06□□□□□ -0.16
TPM3-212ENST00000368533 RRP7AQ9Y3A4 280 aaKnown RBP14.06□□□□□ -0.16
TPM3-212ENST00000368533 ATAD2Q6PL18 1390 aa14.05□□□□□ -0.16
TPM3-212ENST00000368533 RTL5Q5HYW3 569 aaPredicted RBP14.04□□□□□ -0.16
TPM3-212ENST00000368533 C14orf37Q86TY3 774 aa14.04□□□□□ -0.16
TPM3-212ENST00000368533 UBE2Q2Q8WVN8 375 aa14.04□□□□□ -0.16
TPM3-212ENST00000368533 PPIP5K1Q6PFW1 1433 aa14.04□□□□□ -0.16
TPM3-212ENST00000368533 NUDCQ9Y266 331 aa14.04□□□□□ -0.16
TPM3-212ENST00000368533 CEP170BQ9Y4F5 1589 aaPredicted RBP14.03□□□□□ -0.16
TPM3-212ENST00000368533 U2SURPO15042 1029 aaKnown RBP14.03□□□□□ -0.16
TPM3-212ENST00000368533 APAF1O14727 1248 aa14.03□□□□□ -0.16
TPM3-212ENST00000368533 NUTM2GQ5VZR2 741 aa14.03□□□□□ -0.16
TPM3-212ENST00000368533 CD163L1Q9NR16 1453 aa14.02□□□□□ -0.17
TPM3-212ENST00000368533 CCDC61Q9Y6R9 512 aa14.01□□□□□ -0.17
TPM3-212ENST00000368533 TBX22Q9Y458 520 aa14.01□□□□□ -0.17
TPM3-212ENST00000368533 RRS1Q15050 365 aaKnown RBP14□□□□□ -0.17
TPM3-212ENST00000368533 U2AF1L5P0DN76 240 aaPredicted RBP13.99□□□□□ -0.17
TPM3-212ENST00000368533 U2AF1Q01081 240 aaKnown RBP eCLIP13.99□□□□□ -0.177e-10■■□□□ 13
TPM3-212ENST00000368533 ARHGAP23Q9P227 1491 aa13.99□□□□□ -0.17
TPM3-212ENST00000368533 ADAMTSL3P82987 1691 aa13.98□□□□□ -0.17
TPM3-212ENST00000368533 ACEP12821 1306 aa13.98□□□□□ -0.17
TPM3-212ENST00000368533 SLIT1O75093 1534 aa13.98□□□□□ -0.17
TPM3-212ENST00000368533 EMILIN1Q9Y6C2 1016 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms