RNA–Protein interactions for RNA: ENST00000368518.5

C1orf43-204, Transcript of chromosome 1 open reading frame 43, humanhuman

TSL 1 (best) BASIC

Gene C1orf43, Length 1,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf43-204ENST00000368518 ESCO1Q5FWF5 840 aa26.05■■□□□ 1.76
C1orf43-204ENST00000368518 NUTM2FA1L443 756 aa26.04■■□□□ 1.76
C1orf43-204ENST00000368518 AFF2P51816 1311 aa26.04■■□□□ 1.76
C1orf43-204ENST00000368518 PLEKHH1Q9ULM0 1364 aa26.04■■□□□ 1.76
C1orf43-204ENST00000368518 C8orf37Q96NL8 207 aa26.03■■□□□ 1.76
C1orf43-204ENST00000368518 TECPR2O15040 1411 aa26.03■■□□□ 1.76
C1orf43-204ENST00000368518 CDC42BPGQ6DT37 1551 aa26.03■■□□□ 1.76
C1orf43-204ENST00000368518 SOS2Q07890 1332 aaPredicted RBP26.02■■□□□ 1.76
C1orf43-204ENST00000368518 ABCC11Q96J66 1382 aa26.02■■□□□ 1.76
C1orf43-204ENST00000368518 YTHDC2Q9H6S0 1430 aaKnown RBP26.02■■□□□ 1.76
C1orf43-204ENST00000368518 LAMC1P11047 1609 aa26.02■■□□□ 1.76
C1orf43-204ENST00000368518 CFAP70Q5T0N1 1121 aa26.01■■□□□ 1.75
C1orf43-204ENST00000368518 KNDC1Q76NI1 1749 aa26■■□□□ 1.75
C1orf43-204ENST00000368518 ADAMTS2O95450 1211 aa26■■□□□ 1.75
C1orf43-204ENST00000368518 C14orf93Q9H972 538 aaKnown RBP26■■□□□ 1.75
C1orf43-204ENST00000368518 RXRBP28702 533 aa25.98■■□□□ 1.75
C1orf43-204ENST00000368518 XPCQ01831 940 aaPredicted RBP25.97■■□□□ 1.75
C1orf43-204ENST00000368518 MYOM2P54296 1465 aa25.97■■□□□ 1.75
C1orf43-204ENST00000368518 FOXO3O43524 673 aa25.96■■□□□ 1.75
C1orf43-204ENST00000368518 NRXN1Q9ULB1 1477 aa25.96■■□□□ 1.75
C1orf43-204ENST00000368518 NPHP3Q7Z494 1330 aa25.95■■□□□ 1.75
C1orf43-204ENST00000368518 NGLY1Q96IV0 654 aa25.94■■□□□ 1.74
C1orf43-204ENST00000368518 DHX57Q6P158 1386 aaKnown RBP25.94■■□□□ 1.74
C1orf43-204ENST00000368518 SAFB2Q14151 953 aaKnown RBP eCLIP25.93■■□□□ 1.74
C1orf43-204ENST00000368518 QTRT2Q9H974 415 aaKnown RBP25.92■■□□□ 1.74
C1orf43-204ENST00000368518 KDM2AQ9Y2K7 1162 aa25.92■■□□□ 1.74
C1orf43-204ENST00000368518 FMN2Q9NZ56 1722 aa25.91■■□□□ 1.74
C1orf43-204ENST00000368518 PXDNQ92626 1479 aa25.91■■□□□ 1.74
C1orf43-204ENST00000368518 SIRT1Q96EB6 747 aa25.9■■□□□ 1.74
C1orf43-204ENST00000368518 PRAM1Q96QH2 718 aa25.89■■□□□ 1.74
C1orf43-204ENST00000368518 DCAF11Q8TEB1 546 aa25.88■■□□□ 1.73
C1orf43-204ENST00000368518 COL22A1Q8NFW1 1626 aaPredicted RBP25.87■■□□□ 1.73
C1orf43-204ENST00000368518 POGKQ9P215 609 aa25.86■■□□□ 1.73
C1orf43-204ENST00000368518 HRCP23327 699 aa25.85■■□□□ 1.73
C1orf43-204ENST00000368518 RBM6P78332 1123 aaKnown RBP25.84■■□□□ 1.73
C1orf43-204ENST00000368518 USP21Q9UK80 565 aa25.84■■□□□ 1.73
C1orf43-204ENST00000368518 RGPD8O14715 1765 aaPredicted RBP25.83■■□□□ 1.73
C1orf43-204ENST00000368518 TRAK1Q9UPV9 953 aa25.83■■□□□ 1.73
C1orf43-204ENST00000368518 CDK12Q9NYV4 1490 aaPredicted RBP25.83■■□□□ 1.73
C1orf43-204ENST00000368518 UPF1Q92900 1129 aaKnown RBP eCLIP25.82■■□□□ 1.723e-6■□□□□ 9.5
C1orf43-204ENST00000368518 KIF1AQ12756 1690 aa25.81■■□□□ 1.72
C1orf43-204ENST00000368518 KRT28Q7Z3Y7 464 aa25.81■■□□□ 1.72
C1orf43-204ENST00000368518 PHF8Q9UPP1 1060 aa25.8■■□□□ 1.72
C1orf43-204ENST00000368518 ADGRB1O14514 1584 aa25.8■■□□□ 1.72
C1orf43-204ENST00000368518 RGS12O14924 1447 aa25.8■■□□□ 1.72
C1orf43-204ENST00000368518 DLC1Q96QB1 1528 aa25.79■■□□□ 1.72
C1orf43-204ENST00000368518 FNBP4Q8N3X1 1017 aaPredicted RBP25.78■■□□□ 1.72
C1orf43-204ENST00000368518 HIRIP3Q9BW71 556 aaPredicted RBP25.78■■□□□ 1.72
C1orf43-204ENST00000368518 PLEKHG5O94827 1062 aa25.77■■□□□ 1.72
C1orf43-204ENST00000368518 SPATA31A3Q5VYP0 1347 aa25.77■■□□□ 1.72
C1orf43-204ENST00000368518 TRPC5Q9UL62 973 aaPredicted RBP25.76■■□□□ 1.71
C1orf43-204ENST00000368518 MINK1Q8N4C8 1332 aaPredicted RBP25.75■■□□□ 1.71
C1orf43-204ENST00000368518 MARF1Q9Y4F3 1742 aaKnown RBP25.74■■□□□ 1.71
C1orf43-204ENST00000368518 PMFBP1Q8TBY8 1022 aa25.74■■□□□ 1.71
C1orf43-204ENST00000368518 PSME1Q06323 249 aa25.73■■□□□ 1.71
C1orf43-204ENST00000368518 LMOD2Q6P5Q4 547 aa25.72■■□□□ 1.71
C1orf43-204ENST00000368518 STAC3Q96MF2 364 aa25.72■■□□□ 1.71
C1orf43-204ENST00000368518 ATRNO75882 1429 aa25.71■■□□□ 1.71
C1orf43-204ENST00000368518 USP32Q8NFA0 1604 aa25.71■■□□□ 1.71
C1orf43-204ENST00000368518 ADGRB2O60241 1585 aa25.7■■□□□ 1.71
C1orf43-204ENST00000368518 HAP1P54257 671 aaPredicted RBP25.7■■□□□ 1.7
C1orf43-204ENST00000368518 TNS3Q68CZ2 1445 aa25.7■■□□□ 1.7
C1orf43-204ENST00000368518 BCL9LQ86UU0 1499 aa25.69■■□□□ 1.7
C1orf43-204ENST00000368518 CABLES1Q8TDN4 633 aa25.69■■□□□ 1.7
C1orf43-204ENST00000368518 ANKARQ7Z5J8 1434 aa25.69■■□□□ 1.7
C1orf43-204ENST00000368518 WASLO00401 505 aaPredicted RBP25.65■■□□□ 1.7
C1orf43-204ENST00000368518 SBNO1A3KN83 1393 aa25.65■■□□□ 1.7
C1orf43-204ENST00000368518 PRR36Q9H6K5 1346 aa25.64■■□□□ 1.7
C1orf43-204ENST00000368518 ARHGEF28Q8N1W1 1705 aaKnown RBP25.63■■□□□ 1.69
C1orf43-204ENST00000368518 EIF3AQ14152 1382 aaKnown RBP25.62■■□□□ 1.69
C1orf43-204ENST00000368518 UNC5CLQ8IV45 518 aa25.62■■□□□ 1.69
C1orf43-204ENST00000368518 GJD4Q96KN9 370 aaPredicted RBP25.62■■□□□ 1.69
C1orf43-204ENST00000368518 TULP4Q9NRJ4 1543 aa25.62■■□□□ 1.69
C1orf43-204ENST00000368518 ARHGEF10O15013 1369 aa25.61■■□□□ 1.69
C1orf43-204ENST00000368518 SLIT2O94813 1529 aa25.6■■□□□ 1.69
C1orf43-204ENST00000368518 GPRASP1Q5JY77 1395 aa25.59■■□□□ 1.69
C1orf43-204ENST00000368518 ATAD2Q6PL18 1390 aa25.59■■□□□ 1.69
C1orf43-204ENST00000368518 NGDNQ8NEJ9 315 aaKnown RBP25.58■■□□□ 1.69
C1orf43-204ENST00000368518 ABCA3Q99758 1704 aa25.57■■□□□ 1.68
C1orf43-204ENST00000368518 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.57■■□□□ 1.68
C1orf43-204ENST00000368518 TRPM3Q9HCF6 1732 aaPredicted RBP25.57■■□□□ 1.68
C1orf43-204ENST00000368518 NBPF1Q3BBV0 1214 aa25.56■■□□□ 1.68
C1orf43-204ENST00000368518 RALGAPBQ86X10 1494 aa25.55■■□□□ 1.68
C1orf43-204ENST00000368518 PAK3O75914 559 aaPredicted RBP25.55■■□□□ 1.68
C1orf43-204ENST00000368518 NUDT16Q96DE0 195 aaKnown RBP25.55■■□□□ 1.68
C1orf43-204ENST00000368518 CDK19Q9BWU1 502 aa25.54■■□□□ 1.68
C1orf43-204ENST00000368518 GLI3P10071 1580 aa25.53■■□□□ 1.68
C1orf43-204ENST00000368518 PLCH1Q4KWH8 1693 aa25.53■■□□□ 1.68
C1orf43-204ENST00000368518 CCDC9Q9Y3X0 531 aaKnown RBP25.53■■□□□ 1.68
C1orf43-204ENST00000368518 KIAA1210Q9ULL0 1709 aa25.53■■□□□ 1.68
C1orf43-204ENST00000368518 FAM83GA6ND36 823 aa25.52■■□□□ 1.68
C1orf43-204ENST00000368518 ALS2Q96Q42 1657 aa25.52■■□□□ 1.68
C1orf43-204ENST00000368518 ATP7BP35670 1465 aa25.51■■□□□ 1.67
C1orf43-204ENST00000368518 EP400Q96L91 3159 aa25.5■■□□□ 1.67
C1orf43-204ENST00000368518 ITSN1Q15811 1721 aa25.5■■□□□ 1.67
C1orf43-204ENST00000368518 VPS72Q15906 364 aa25.49■■□□□ 1.67
C1orf43-204ENST00000368518 SIN3AQ96ST3 1273 aa25.48■■□□□ 1.67
C1orf43-204ENST00000368518 NWD2Q9ULI1 1742 aa25.48■■□□□ 1.67
C1orf43-204ENST00000368518 L3MBTL2Q969R5 705 aa25.46■■□□□ 1.67
C1orf43-204ENST00000368518 NEUROD1Q13562 356 aa25.45■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms