RNA–Protein interactions for RNA: ENST00000368407.7

EFNA1-202, Transcript of ephrin A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNA1, Length 1,926 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA1-202ENST00000368407 PRKRIP1Q9H875 184 aaPredicted RBP35.89■■■■□ 3.34
EFNA1-202ENST00000368407 CENPJQ9HC77 1338 aaPredicted RBP35.88■■■■□ 3.33
EFNA1-202ENST00000368407 SAFB2Q14151 953 aaKnown RBP eCLIP35.87■■■■□ 3.33
EFNA1-202ENST00000368407 WAPLQ7Z5K2 1190 aa35.87■■■■□ 3.33
EFNA1-202ENST00000368407 DLC1Q96QB1 1528 aa35.86■■■■□ 3.33
EFNA1-202ENST00000368407 ROBO2Q9HCK4 1378 aa35.86■■■■□ 3.33
EFNA1-202ENST00000368407 PLEKHH1Q9ULM0 1364 aa35.85■■■■□ 3.33
EFNA1-202ENST00000368407 KCNA6P17658 529 aa35.85■■■■□ 3.33
EFNA1-202ENST00000368407 C11orf95C9JLR9 678 aaPredicted RBP35.84■■■■□ 3.33
EFNA1-202ENST00000368407 POGKQ9P215 609 aa35.83■■■■□ 3.33
EFNA1-202ENST00000368407 KNDC1Q76NI1 1749 aa35.83■■■■□ 3.33
EFNA1-202ENST00000368407 CPS1P31327 1500 aa35.82■■■■□ 3.33
EFNA1-202ENST00000368407 XRN1Q8IZH2 1706 aaKnown RBP35.82■■■■□ 3.32
EFNA1-202ENST00000368407 CHD2O14647 1828 aaKnown RBP35.8■■■■□ 3.32
EFNA1-202ENST00000368407 SIRT1Q96EB6 747 aa35.79■■■■□ 3.32
EFNA1-202ENST00000368407 FAM135BQ49AJ0 1406 aa35.78■■■■□ 3.32
EFNA1-202ENST00000368407 MSH5O43196 834 aa35.78■■■■□ 3.32
EFNA1-202ENST00000368407 PTCH1Q13635 1447 aa35.77■■■■□ 3.32
EFNA1-202ENST00000368407 QRICH2Q9H0J4 1663 aa35.77■■■■□ 3.32
EFNA1-202ENST00000368407 DISP3Q9P2K9 1392 aa35.75■■■■□ 3.31
EFNA1-202ENST00000368407 SBNO2Q9Y2G9 1366 aa35.74■■■■□ 3.31
EFNA1-202ENST00000368407 DMRT2Q9Y5R5 561 aa35.74■■■■□ 3.31
EFNA1-202ENST00000368407 MINK1Q8N4C8 1332 aaPredicted RBP35.74■■■■□ 3.31
EFNA1-202ENST00000368407 NWD1Q149M9 1564 aa35.72■■■■□ 3.31
EFNA1-202ENST00000368407 TMF1P82094 1093 aa35.71■■■■□ 3.31
EFNA1-202ENST00000368407 KIF7Q2M1P5 1343 aa35.7■■■■□ 3.31
EFNA1-202ENST00000368407 RBM33Q96EV2 1170 aaKnown RBP35.69■■■■□ 3.3
EFNA1-202ENST00000368407 BCL11AQ9H165 835 aa35.67■■■■□ 3.3
EFNA1-202ENST00000368407 ZNF335Q9H4Z2 1342 aaPredicted RBP35.67■■■■□ 3.3
EFNA1-202ENST00000368407 MRS2Q9HD23 443 aa35.66■■■■□ 3.3
EFNA1-202ENST00000368407 STRCP1A6NGW2 1772 aa35.65■■■■□ 3.3
EFNA1-202ENST00000368407 POLR3GLQ9BT43 218 aa35.65■■■■□ 3.3
EFNA1-202ENST00000368407 SMG6Q86US8 1419 aaKnown RBP35.65■■■■□ 3.3
EFNA1-202ENST00000368407 CCDC184Q52MB2 194 aa35.64■■■■□ 3.3
EFNA1-202ENST00000368407 TULP4Q9NRJ4 1543 aa35.63■■■■□ 3.3
EFNA1-202ENST00000368407 SIPA1L2Q9P2F8 1722 aaPredicted RBP35.62■■■■□ 3.29
EFNA1-202ENST00000368407 NKTRP30414 1462 aaKnown RBP35.62■■■■□ 3.29
EFNA1-202ENST00000368407 SLC24A1O60721 1099 aa35.61■■■■□ 3.29
EFNA1-202ENST00000368407 PROSER2Q86WR7 435 aaPredicted RBP35.6■■■■□ 3.29
EFNA1-202ENST00000368407 EVC2Q86UK5 1308 aa35.6■■■■□ 3.29
EFNA1-202ENST00000368407 IRX6P78412 446 aaPredicted RBP35.57■■■■□ 3.28
EFNA1-202ENST00000368407 CDK19Q9BWU1 502 aa35.55■■■■□ 3.28
EFNA1-202ENST00000368407 CABP2Q9NPB3 220 aa35.55■■■■□ 3.28
EFNA1-202ENST00000368407 RNF123Q5XPI4 1314 aa35.54■■■■□ 3.28
EFNA1-202ENST00000368407 WASLO00401 505 aaPredicted RBP35.53■■■■□ 3.28
EFNA1-202ENST00000368407 CDCA8Q53HL2 280 aa35.53■■■■□ 3.28
EFNA1-202ENST00000368407 ERICH6Q7L0X2 663 aa35.53■■■■□ 3.28
EFNA1-202ENST00000368407 SRPK2P78362 688 aaKnown RBP35.52■■■■□ 3.28
EFNA1-202ENST00000368407 TMEM94Q12767 1356 aa35.52■■■■□ 3.28
EFNA1-202ENST00000368407 FAM9BQ8IZU0 186 aa35.51■■■■□ 3.27
EFNA1-202ENST00000368407 ADGRB2O60241 1585 aa35.51■■■■□ 3.27
EFNA1-202ENST00000368407 C14orf37Q86TY3 774 aa35.48■■■■□ 3.27
EFNA1-202ENST00000368407 NALCNQ8IZF0 1738 aa35.48■■■■□ 3.27
EFNA1-202ENST00000368407 ADGRL3Q9HAR2 1447 aa35.47■■■■□ 3.27
EFNA1-202ENST00000368407 LRRC7Q96NW7 1537 aa35.45■■■■□ 3.27
EFNA1-202ENST00000368407 PUS7Q96PZ0 661 aaKnown RBP35.44■■■■□ 3.26
EFNA1-202ENST00000368407 NUTM2FA1L443 756 aa35.43■■■■□ 3.26
EFNA1-202ENST00000368407 NUDCQ9Y266 331 aa35.4■■■■□ 3.26
EFNA1-202ENST00000368407 KTN1Q86UP2 1357 aaKnown RBP35.4■■■■□ 3.26
EFNA1-202ENST00000368407 PRR36Q9H6K5 1346 aa35.39■■■■□ 3.26
EFNA1-202ENST00000368407 NCOA3Q9Y6Q9 1424 aa35.39■■■■□ 3.26
EFNA1-202ENST00000368407 CDC42BPGQ6DT37 1551 aa35.38■■■■□ 3.25
EFNA1-202ENST00000368407 ATAD2Q6PL18 1390 aa35.38■■■■□ 3.25
EFNA1-202ENST00000368407 TMC1Q8TDI8 760 aa35.38■■■■□ 3.25
EFNA1-202ENST00000368407 C19orf44Q9H6X5 657 aa35.38■■■■□ 3.25
EFNA1-202ENST00000368407 NUDT16Q96DE0 195 aaKnown RBP35.37■■■■□ 3.25
EFNA1-202ENST00000368407 SLC12A5Q9H2X9 1139 aa35.37■■■■□ 3.25
EFNA1-202ENST00000368407 MYOM1P52179 1685 aa35.36■■■■□ 3.25
EFNA1-202ENST00000368407 LTBP4Q8N2S1 1624 aa35.35■■■■□ 3.25
EFNA1-202ENST00000368407 ATP7BP35670 1465 aa35.35■■■■□ 3.25
EFNA1-202ENST00000368407 XIRP1Q702N8 1843 aaKnown RBP35.35■■■■□ 3.25
EFNA1-202ENST00000368407 B4GALNT3Q6L9W6 998 aa35.34■■■■□ 3.25
EFNA1-202ENST00000368407 CABP1Q9NZU7 370 aa35.31■■■■□ 3.24
EFNA1-202ENST00000368407 FMN2Q9NZ56 1722 aa35.3■■■■□ 3.24
EFNA1-202ENST00000368407 PANK3Q9H999 370 aa35.3■■■■□ 3.24
EFNA1-202ENST00000368407 CCDC61Q9Y6R9 512 aa35.3■■■■□ 3.24
EFNA1-202ENST00000368407 USP32Q8NFA0 1604 aa35.29■■■■□ 3.24
EFNA1-202ENST00000368407 MSH6P52701 1360 aa35.29■■■■□ 3.24
EFNA1-202ENST00000368407 PPIP5K1Q6PFW1 1433 aa35.27■■■■□ 3.24
EFNA1-202ENST00000368407 ATF3P18847 181 aa35.26■■■■□ 3.23
EFNA1-202ENST00000368407 DCCP43146 1447 aa35.25■■■■□ 3.23
EFNA1-202ENST00000368407 ANKARQ7Z5J8 1434 aa35.25■■■■□ 3.23
EFNA1-202ENST00000368407 NINLQ9Y2I6 1382 aa35.24■■■■□ 3.23
EFNA1-202ENST00000368407 CADPS2Q86UW7 1296 aa35.21■■■■□ 3.23
EFNA1-202ENST00000368407 CD163L1Q9NR16 1453 aa35.2■■■■□ 3.23
EFNA1-202ENST00000368407 RGPD8O14715 1765 aaPredicted RBP35.2■■■■□ 3.23
EFNA1-202ENST00000368407 TOPAZ1Q8N9V7 1692 aa35.2■■■■□ 3.23
EFNA1-202ENST00000368407 BRD4O60885 1362 aaPredicted RBP35.2■■■■□ 3.23
EFNA1-202ENST00000368407 ANKRD36BQ8N2N9 1353 aa35.19■■■■□ 3.22
EFNA1-202ENST00000368407 PMFBP1Q8TBY8 1022 aa35.18■■■■□ 3.22
EFNA1-202ENST00000368407 PNISRQ8TF01 805 aaKnown RBP35.18■■■■□ 3.22
EFNA1-202ENST00000368407 CARD14Q9BXL6 1004 aa35.18■■■■□ 3.22
EFNA1-202ENST00000368407 A0A1W2PP64 1363 aa35.18■■■■□ 3.22
EFNA1-202ENST00000368407 MST1RQ04912 1400 aa35.18■■■■□ 3.22
EFNA1-202ENST00000368407 PER1O15534 1290 aaPredicted RBP35.17■■■■□ 3.22
EFNA1-202ENST00000368407 C1orf167Q5SNV9 1468 aa35.16■■■■□ 3.22
EFNA1-202ENST00000368407 PLEKHG3A1L390 1219 aa35.16■■■■□ 3.22
EFNA1-202ENST00000368407 NOP58Q9Y2X3 529 aaKnown RBP35.16■■■■□ 3.22
EFNA1-202ENST00000368407 ORAI2Q96SN7 254 aa35.15■■■■□ 3.22
EFNA1-202ENST00000368407 ESCO1Q5FWF5 840 aa35.14■■■■□ 3.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms