RNA–Protein interactions for RNA: ENST00000368361.8

CLK2-203, Transcript of CDC like kinase 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLK2, Length 2,166 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-203ENST00000368361 ANKRD36BQ8N2N9 1353 aa33.17■■■□□ 2.9
CLK2-203ENST00000368361 POGKQ9P215 609 aa33.17■■■□□ 2.9
CLK2-203ENST00000368361 SETD1AO15047 1707 aaKnown RBP33.17■■■□□ 2.9
CLK2-203ENST00000368361 MINK1Q8N4C8 1332 aaPredicted RBP33.17■■■□□ 2.9
CLK2-203ENST00000368361 SRPK2P78362 688 aaKnown RBP33.15■■■□□ 2.9
CLK2-203ENST00000368361 PPP4R2Q9NY27 417 aa33.14■■■□□ 2.9
CLK2-203ENST00000368361 CDCA7LQ96GN5 454 aa33.14■■■□□ 2.9
CLK2-203ENST00000368361 TNRQ92752 1358 aa33.14■■■□□ 2.9
CLK2-203ENST00000368361 MORC1Q86VD1 984 aa33.13■■■□□ 2.89
CLK2-203ENST00000368361 CGNL1Q0VF96 1302 aa33.12■■■□□ 2.89
CLK2-203ENST00000368361 NRXN3Q9Y4C0 1643 aa33.11■■■□□ 2.89
CLK2-203ENST00000368361 TSHZ2Q9NRE2 1034 aa33.1■■■□□ 2.89
CLK2-203ENST00000368361 ABCF1Q8NE71 845 aaKnown RBP eCLIP33.09■■■□□ 2.89
CLK2-203ENST00000368361 NINLQ9Y2I6 1382 aa33.09■■■□□ 2.89
CLK2-203ENST00000368361 DLC1Q96QB1 1528 aa33.08■■■□□ 2.89
CLK2-203ENST00000368361 TNNT2P45379 298 aaPredicted RBP33.07■■■□□ 2.89
CLK2-203ENST00000368361 ATAD2Q6PL18 1390 aa33.07■■■□□ 2.88
CLK2-203ENST00000368361 A0A1W2PP64 1363 aa33.07■■■□□ 2.88
CLK2-203ENST00000368361 POLR3AO14802 1390 aaPredicted RBP33.07■■■□□ 2.88
CLK2-203ENST00000368361 PLEKHH1Q9ULM0 1364 aa33.05■■■□□ 2.88
CLK2-203ENST00000368361 UBR1Q8IWV7 1749 aa33.04■■■□□ 2.88
CLK2-203ENST00000368361 CCDC146Q8IYE0 955 aa33.03■■■□□ 2.88
CLK2-203ENST00000368361 RCAN3Q9UKA8 241 aa33.03■■■□□ 2.88
CLK2-203ENST00000368361 WAPLQ7Z5K2 1190 aa33.02■■■□□ 2.88
CLK2-203ENST00000368361 NSD2O96028 1365 aa33.02■■■□□ 2.88
CLK2-203ENST00000368361 CDK19Q9BWU1 502 aa33.02■■■□□ 2.88
CLK2-203ENST00000368361 ABCC11Q96J66 1382 aa33.01■■■□□ 2.88
CLK2-203ENST00000368361 METP08581 1390 aa33.01■■■□□ 2.87
CLK2-203ENST00000368361 CD163L1Q9NR16 1453 aa32.99■■■□□ 2.87
CLK2-203ENST00000368361 HDGFP51858 240 aaKnown RBP32.99■■■□□ 2.87
CLK2-203ENST00000368361 B4GALNT3Q6L9W6 998 aa32.99■■■□□ 2.87
CLK2-203ENST00000368361 TMEM2Q9UHN6 1383 aa32.98■■■□□ 2.87
CLK2-203ENST00000368361 SHPRHQ149N8 1683 aa32.98■■■□□ 2.87
CLK2-203ENST00000368361 ZNF521Q96K83 1311 aa32.97■■■□□ 2.87
CLK2-203ENST00000368361 TRHP20396 242 aaPredicted RBP32.96■■■□□ 2.87
CLK2-203ENST00000368361 CEBPAP49715 358 aaPredicted RBP32.96■■■□□ 2.87
CLK2-203ENST00000368361 RRP1P56182 461 aaKnown RBP32.96■■■□□ 2.87
CLK2-203ENST00000368361 TERF2IPQ9NYB0 399 aa32.95■■■□□ 2.87
CLK2-203ENST00000368361 MTHFSP49914 203 aa32.93■■■□□ 2.86
CLK2-203ENST00000368361 APAF1O14727 1248 aa32.93■■■□□ 2.86
CLK2-203ENST00000368361 NLRP1Q9C000 1473 aa32.91■■■□□ 2.86
CLK2-203ENST00000368361 C3P01024 1663 aa32.9■■■□□ 2.86
CLK2-203ENST00000368361 CABP1Q9NZU7 370 aa32.9■■■□□ 2.86
CLK2-203ENST00000368361 KNDC1Q76NI1 1749 aa32.89■■■□□ 2.86
CLK2-203ENST00000368361 TXNDC2Q86VQ3 553 aa32.89■■■□□ 2.86
CLK2-203ENST00000368361 GOLGA2Q08379 1002 aa32.88■■■□□ 2.85
CLK2-203ENST00000368361 GGNBP2Q9H3C7 697 aa32.88■■■□□ 2.85
CLK2-203ENST00000368361 HDGFL2Q7Z4V5 671 aaPredicted RBP32.87■■■□□ 2.85
CLK2-203ENST00000368361 FER1L4A9Z1Z3 1794 aa32.87■■■□□ 2.85
CLK2-203ENST00000368361 DUSP27Q5VZP5 1158 aa32.86■■■□□ 2.85
CLK2-203ENST00000368361 FYB1O15117 783 aa32.85■■■□□ 2.85
CLK2-203ENST00000368361 TECPR2O15040 1411 aa32.85■■■□□ 2.85
CLK2-203ENST00000368361 ANKRD26Q9UPS8 1709 aa32.85■■■□□ 2.85
CLK2-203ENST00000368361 CFAP53Q96M91 514 aa32.85■■■□□ 2.85
CLK2-203ENST00000368361 LTKP29376 864 aa32.83■■■□□ 2.85
CLK2-203ENST00000368361 FAM135BQ49AJ0 1406 aa32.83■■■□□ 2.85
CLK2-203ENST00000368361 ADAMTS13Q76LX8 1427 aa32.83■■■□□ 2.85
CLK2-203ENST00000368361 CPS1P31327 1500 aa32.83■■■□□ 2.85
CLK2-203ENST00000368361 PLPPR3Q6T4P5 718 aa32.82■■■□□ 2.84
CLK2-203ENST00000368361 MED14O60244 1454 aa32.82■■■□□ 2.84
CLK2-203ENST00000368361 WASLO00401 505 aaPredicted RBP32.81■■■□□ 2.84
CLK2-203ENST00000368361 SIRT1Q96EB6 747 aa32.8■■■□□ 2.84
CLK2-203ENST00000368361 ATP7BP35670 1465 aa32.8■■■□□ 2.84
CLK2-203ENST00000368361 PLEKHG1Q9ULL1 1385 aa32.79■■■□□ 2.84
CLK2-203ENST00000368361 SLFN5Q08AF3 891 aa32.79■■■□□ 2.84
CLK2-203ENST00000368361 KIF20BQ96Q89 1820 aa32.78■■■□□ 2.84
CLK2-203ENST00000368361 NGEFQ8N5V2 710 aa32.77■■■□□ 2.84
CLK2-203ENST00000368361 CCDC136Q96JN2 1154 aa32.77■■■□□ 2.84
CLK2-203ENST00000368361 SPINK5Q9NQ38 1064 aaPredicted RBP32.76■■■□□ 2.84
CLK2-203ENST00000368361 TRMT2AQ8IZ69 625 aaKnown RBP32.75■■■□□ 2.83
CLK2-203ENST00000368361 RUNDC1Q96C34 613 aa32.75■■■□□ 2.83
CLK2-203ENST00000368361 PLIN1O60240 522 aa32.74■■■□□ 2.83
CLK2-203ENST00000368361 EXOC6Q8TAG9 804 aa32.74■■■□□ 2.83
CLK2-203ENST00000368361 PPIP5K1Q6PFW1 1433 aa32.73■■■□□ 2.83
CLK2-203ENST00000368361 ROBO2Q9HCK4 1378 aa32.73■■■□□ 2.83
CLK2-203ENST00000368361 IQSEC2Q5JU85 1478 aa32.72■■■□□ 2.83
CLK2-203ENST00000368361 DMRT2Q9Y5R5 561 aa32.72■■■□□ 2.83
CLK2-203ENST00000368361 SLIT1O75093 1534 aa32.71■■■□□ 2.83
CLK2-203ENST00000368361 SUGP2Q8IX01 1082 aaKnown RBP eCLIP32.7■■■□□ 2.83
CLK2-203ENST00000368361 EID1Q9Y6B2 187 aa32.7■■■□□ 2.83
CLK2-203ENST00000368361 ARHGAP23Q9P227 1491 aa32.7■■■□□ 2.83
CLK2-203ENST00000368361 WWC1Q8IX03 1113 aa32.69■■■□□ 2.82
CLK2-203ENST00000368361 CPSF1Q10570 1443 aaKnown RBP32.69■■■□□ 2.82
CLK2-203ENST00000368361 NUDT16Q96DE0 195 aaKnown RBP32.69■■■□□ 2.82
CLK2-203ENST00000368361 E9PSI1 815 aa32.68■■■□□ 2.82
CLK2-203ENST00000368361 TCP11L2Q8N4U5 519 aa32.68■■■□□ 2.82
CLK2-203ENST00000368361 COL3A1P02461 1466 aaPredicted RBP32.68■■■□□ 2.82
CLK2-203ENST00000368361 U2AF1L5P0DN76 240 aaPredicted RBP32.68■■■□□ 2.82
CLK2-203ENST00000368361 U2AF1Q01081 240 aaKnown RBP eCLIP32.68■■■□□ 2.82
CLK2-203ENST00000368361 SLC26A8Q96RN1 970 aa32.68■■■□□ 2.82
CLK2-203ENST00000368361 NCKAP5LQ9HCH0 1330 aa32.67■■■□□ 2.82
CLK2-203ENST00000368361 NEUROD2Q15784 382 aa32.66■■■□□ 2.82
CLK2-203ENST00000368361 RRP7AQ9Y3A4 280 aaKnown RBP32.66■■■□□ 2.82
CLK2-203ENST00000368361 NKTRP30414 1462 aaKnown RBP32.66■■■□□ 2.82
CLK2-203ENST00000368361 CCDC61Q9Y6R9 512 aa32.65■■■□□ 2.82
CLK2-203ENST00000368361 SIPA1L2Q9P2F8 1722 aaPredicted RBP32.63■■■□□ 2.81
CLK2-203ENST00000368361 PTPRUQ92729 1446 aa32.63■■■□□ 2.81
CLK2-203ENST00000368361 CDC42BPGQ6DT37 1551 aa32.63■■■□□ 2.81
CLK2-203ENST00000368361 EDC4Q6P2E9 1401 aaKnown RBP32.63■■■□□ 2.81
CLK2-203ENST00000368361 RBM19Q9Y4C8 960 aaKnown RBP32.63■■■□□ 2.81
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms