RNA–Protein interactions for RNA: ENST00000368309.3

UBQLN4-201, Transcript of ubiquilin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBQLN4, Length 3,576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-201ENST00000368309 NKTRP30414 1462 aaKnown RBP23.59■■□□□ 1.37
UBQLN4-201ENST00000368309 MYO3AQ8NEV4 1616 aa23.58■■□□□ 1.36
UBQLN4-201ENST00000368309 CENPQQ7L2Z9 268 aaPredicted RBP23.57■■□□□ 1.36
UBQLN4-201ENST00000368309 PPLO60437 1756 aa23.56■■□□□ 1.36
UBQLN4-201ENST00000368309 EVC2Q86UK5 1308 aa23.56■■□□□ 1.36
UBQLN4-201ENST00000368309 CFAP74Q9C0B2 1584 aa23.55■■□□□ 1.36
UBQLN4-201ENST00000368309 CGNL1Q0VF96 1302 aa23.55■■□□□ 1.36
UBQLN4-201ENST00000368309 TCP11L2Q8N4U5 519 aa23.54■■□□□ 1.36
UBQLN4-201ENST00000368309 QRICH2Q9H0J4 1663 aa23.53■■□□□ 1.36
UBQLN4-201ENST00000368309 RUNDC1Q96C34 613 aa23.52■■□□□ 1.36
UBQLN4-201ENST00000368309 NGEFQ8N5V2 710 aa23.52■■□□□ 1.36
UBQLN4-201ENST00000368309 RGS3P49796 1198 aa23.51■■□□□ 1.35
UBQLN4-201ENST00000368309 SIGLEC1Q9BZZ2 1709 aa23.51■■□□□ 1.35
UBQLN4-201ENST00000368309 YEATS2Q9ULM3 1422 aa23.5■■□□□ 1.35
UBQLN4-201ENST00000368309 NEO1Q92859 1461 aa23.5■■□□□ 1.35
UBQLN4-201ENST00000368309 CANXP27824 592 aaKnown RBP23.5■■□□□ 1.35
UBQLN4-201ENST00000368309 SRPK2P78362 688 aaKnown RBP23.49■■□□□ 1.35
UBQLN4-201ENST00000368309 FRAT1Q92837 279 aaPredicted RBP23.49■■□□□ 1.35
UBQLN4-201ENST00000368309 CFAP53Q96M91 514 aa23.49■■□□□ 1.35
UBQLN4-201ENST00000368309 CAMSAP1Q5T5Y3 1602 aa23.48■■□□□ 1.35
UBQLN4-201ENST00000368309 PANK1Q8TE04 598 aa23.48■■□□□ 1.35
UBQLN4-201ENST00000368309 CYB5RLQ6IPT4 315 aa23.48■■□□□ 1.35
UBQLN4-201ENST00000368309 FBXO31Q5XUX0 539 aaPredicted RBP23.47■■□□□ 1.35
UBQLN4-201ENST00000368309 U2AF1L5P0DN76 240 aaPredicted RBP23.47■■□□□ 1.35
UBQLN4-201ENST00000368309 U2AF1Q01081 240 aaKnown RBP eCLIP23.47■■□□□ 1.35
UBQLN4-201ENST00000368309 SLC52A1Q9NWF4 448 aa23.47■■□□□ 1.35
UBQLN4-201ENST00000368309 COG6Q9Y2V7 657 aa23.47■■□□□ 1.35
UBQLN4-201ENST00000368309 GLI2P10070 1586 aa23.46■■□□□ 1.35
UBQLN4-201ENST00000368309 DIP2CQ9Y2E4 1556 aa23.45■■□□□ 1.35
UBQLN4-201ENST00000368309 DEKP35659 375 aaKnown RBP23.45■■□□□ 1.34
UBQLN4-201ENST00000368309 MINK1Q8N4C8 1332 aaPredicted RBP23.45■■□□□ 1.34
UBQLN4-201ENST00000368309 NEXMIFQ5QGS0 1516 aa23.45■■□□□ 1.34
UBQLN4-201ENST00000368309 ANKRD36BQ8N2N9 1353 aa23.45■■□□□ 1.34
UBQLN4-201ENST00000368309 LAS1LQ9Y4W2 734 aaKnown RBP23.45■■□□□ 1.34
UBQLN4-201ENST00000368309 IGHDP01880 384 aa23.44■■□□□ 1.34
UBQLN4-201ENST00000368309 GGNBP2Q9H3C7 697 aa23.44■■□□□ 1.34
UBQLN4-201ENST00000368309 TULP4Q9NRJ4 1543 aa23.44■■□□□ 1.34
UBQLN4-201ENST00000368309 ZC3H13Q5T200 1668 aaKnown RBP23.44■■□□□ 1.34
UBQLN4-201ENST00000368309 BCL2L13Q9BXK5 485 aa23.44■■□□□ 1.34
UBQLN4-201ENST00000368309 PUS7Q96PZ0 661 aaKnown RBP23.42■■□□□ 1.34
UBQLN4-201ENST00000368309 PRAM1Q96QH2 718 aa23.42■■□□□ 1.34
UBQLN4-201ENST00000368309 PDE3AQ14432 1141 aa23.41■■□□□ 1.34
UBQLN4-201ENST00000368309 POGKQ9P215 609 aa23.41■■□□□ 1.34
UBQLN4-201ENST00000368309 RARSP54136 660 aaKnown RBP23.41■■□□□ 1.34
UBQLN4-201ENST00000368309 ARHGAP31Q2M1Z3 1444 aa23.4■■□□□ 1.34
UBQLN4-201ENST00000368309 FAM161AQ3B820 660 aa23.4■■□□□ 1.34
UBQLN4-201ENST00000368309 SHPRHQ149N8 1683 aa23.4■■□□□ 1.34
UBQLN4-201ENST00000368309 PIK3C2BO00750 1634 aa23.4■■□□□ 1.34
UBQLN4-201ENST00000368309 C8orf34Q49A92 452 aa23.4■■□□□ 1.34
UBQLN4-201ENST00000368309 PHF23Q9BUL5 403 aaPredicted RBP23.4■■□□□ 1.34
UBQLN4-201ENST00000368309 TNNQ9UQP3 1299 aa23.39■■□□□ 1.34
UBQLN4-201ENST00000368309 U2SURPO15042 1029 aaKnown RBP23.39■■□□□ 1.33
UBQLN4-201ENST00000368309 RTL5Q5HYW3 569 aaPredicted RBP23.39■■□□□ 1.33
UBQLN4-201ENST00000368309 A0A1W2PP64 1363 aa23.39■■□□□ 1.33
UBQLN4-201ENST00000368309 WDR63Q8IWG1 891 aa23.39■■□□□ 1.33
UBQLN4-201ENST00000368309 STAG3Q9UJ98 1225 aa23.39■■□□□ 1.33
UBQLN4-201ENST00000368309 BCL11AQ9H165 835 aa23.38■■□□□ 1.33
UBQLN4-201ENST00000368309 SLC4A3P48751 1232 aa23.37■■□□□ 1.33
UBQLN4-201ENST00000368309 CLUAP1Q96AJ1 413 aa23.37■■□□□ 1.33
UBQLN4-201ENST00000368309 ARHGEF28Q8N1W1 1705 aaKnown RBP23.36■■□□□ 1.33
UBQLN4-201ENST00000368309 FAM69CQ0P6D2 419 aa23.35■■□□□ 1.33
UBQLN4-201ENST00000368309 RLBP1P12271 317 aa23.35■■□□□ 1.33
UBQLN4-201ENST00000368309 FYB1O15117 783 aa23.34■■□□□ 1.33
UBQLN4-201ENST00000368309 NSD2O96028 1365 aa23.34■■□□□ 1.33
UBQLN4-201ENST00000368309 IQSEC2Q5JU85 1478 aa23.34■■□□□ 1.33
UBQLN4-201ENST00000368309 CCDC27Q2M243 656 aa23.33■■□□□ 1.33
UBQLN4-201ENST00000368309 DDRGK1Q96HY6 314 aa23.33■■□□□ 1.32
UBQLN4-201ENST00000368309 RICTORQ6R327 1708 aa23.33■■□□□ 1.32
UBQLN4-201ENST00000368309 ZFYVE9O95405 1425 aa23.33■■□□□ 1.32
UBQLN4-201ENST00000368309 TERF2IPQ9NYB0 399 aa23.32■■□□□ 1.32
UBQLN4-201ENST00000368309 TSR2Q969E8 191 aaKnown RBP23.31■■□□□ 1.32
UBQLN4-201ENST00000368309 ABCC11Q96J66 1382 aa23.31■■□□□ 1.32
UBQLN4-201ENST00000368309 CDK19Q9BWU1 502 aa23.31■■□□□ 1.32
UBQLN4-201ENST00000368309 MYH16Q9H6N6 1097 aa23.3■■□□□ 1.32
UBQLN4-201ENST00000368309 CABP1Q9NZU7 370 aa23.3■■□□□ 1.32
UBQLN4-201ENST00000368309 USP32Q8NFA0 1604 aa23.3■■□□□ 1.32
UBQLN4-201ENST00000368309 NEFMP07197 916 aa23.3■■□□□ 1.32
UBQLN4-201ENST00000368309 YTHDC2Q9H6S0 1430 aaKnown RBP23.29■■□□□ 1.32
UBQLN4-201ENST00000368309 MLECQ14165 292 aa23.29■■□□□ 1.32
UBQLN4-201ENST00000368309 MYO5BQ9ULV0 1848 aa23.28■■□□□ 1.32
UBQLN4-201ENST00000368309 PCDHB15Q9Y5E8 787 aa23.28■■□□□ 1.32
UBQLN4-201ENST00000368309 PTPRMP28827 1452 aa23.28■■□□□ 1.32
UBQLN4-201ENST00000368309 FBLN1P23142 703 aa23.27■■□□□ 1.32
UBQLN4-201ENST00000368309 NINLQ9Y2I6 1382 aa23.27■■□□□ 1.32
UBQLN4-201ENST00000368309 WAPLQ7Z5K2 1190 aa23.27■■□□□ 1.32
UBQLN4-201ENST00000368309 ATAD2Q6PL18 1390 aa23.27■■□□□ 1.32
UBQLN4-201ENST00000368309 PLEKHF1Q96S99 279 aa23.26■■□□□ 1.31
UBQLN4-201ENST00000368309 TMPOP42166 694 aaKnown RBP23.26■■□□□ 1.31
UBQLN4-201ENST00000368309 TMEM131LA2VDJ0 1609 aa23.26■■□□□ 1.31
UBQLN4-201ENST00000368309 HDGFL2Q7Z4V5 671 aaPredicted RBP23.25■■□□□ 1.31
UBQLN4-201ENST00000368309 DAXXQ9UER7 740 aaPredicted RBP23.25■■□□□ 1.31
UBQLN4-201ENST00000368309 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.25■■□□□ 1.31
UBQLN4-201ENST00000368309 PPM1GO15355 546 aaPredicted RBP23.24■■□□□ 1.31
UBQLN4-201ENST00000368309 MAPK8IP3Q9UPT6 1336 aa23.24■■□□□ 1.31
UBQLN4-201ENST00000368309 PREX1Q8TCU6 1659 aa23.24■■□□□ 1.31
UBQLN4-201ENST00000368309 EXOSC9Q06265 439 aaKnown RBP23.23■■□□□ 1.31
UBQLN4-201ENST00000368309 TRIM35Q9UPQ4 493 aa23.23■■□□□ 1.31
UBQLN4-201ENST00000368309 CD163L1Q9NR16 1453 aa23.21■■□□□ 1.31
UBQLN4-201ENST00000368309 DIAPH1O60610 1272 aaKnown RBP23.21■■□□□ 1.31
UBQLN4-201ENST00000368309 RIPK4P57078 832 aa23.2■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms