RNA–Protein interactions for RNA: ENST00000368301.6

LMNA-207, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 2,461 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-207ENST00000368301 GOLGA2Q08379 1002 aa23.92■■□□□ 1.42
LMNA-207ENST00000368301 SPINK5Q9NQ38 1064 aaPredicted RBP23.92■■□□□ 1.42
LMNA-207ENST00000368301 REREQ9P2R6 1566 aa23.92■■□□□ 1.42
LMNA-207ENST00000368301 POLR3AO14802 1390 aaPredicted RBP23.91■■□□□ 1.42
LMNA-207ENST00000368301 AGLP35573 1532 aa23.91■■□□□ 1.42
LMNA-207ENST00000368301 PTPRMP28827 1452 aa23.9■■□□□ 1.42
LMNA-207ENST00000368301 STAG3Q9UJ98 1225 aa23.9■■□□□ 1.42
LMNA-207ENST00000368301 PRAM1Q96QH2 718 aa23.89■■□□□ 1.42
LMNA-207ENST00000368301 ANKRD36BQ8N2N9 1353 aa23.89■■□□□ 1.41
LMNA-207ENST00000368301 MINK1Q8N4C8 1332 aaPredicted RBP23.89■■□□□ 1.41
LMNA-207ENST00000368301 SLFN5Q08AF3 891 aa23.89■■□□□ 1.41
LMNA-207ENST00000368301 C20orf194Q5TEA3 1177 aa23.89■■□□□ 1.41
LMNA-207ENST00000368301 USP32Q8NFA0 1604 aa23.88■■□□□ 1.41
LMNA-207ENST00000368301 CGNL1Q0VF96 1302 aa23.88■■□□□ 1.41
LMNA-207ENST00000368301 DMRT2Q9Y5R5 561 aa23.88■■□□□ 1.41
LMNA-207ENST00000368301 SHPRHQ149N8 1683 aa23.88■■□□□ 1.41
LMNA-207ENST00000368301 YTHDC2Q9H6S0 1430 aaKnown RBP23.88■■□□□ 1.41
LMNA-207ENST00000368301 MSH5O43196 834 aa23.88■■□□□ 1.41
LMNA-207ENST00000368301 PUS7Q96PZ0 661 aaKnown RBP23.88■■□□□ 1.41
LMNA-207ENST00000368301 CRBNQ96SW2 442 aa23.88■■□□□ 1.41
LMNA-207ENST00000368301 SRPK2P78362 688 aaKnown RBP23.87■■□□□ 1.41
LMNA-207ENST00000368301 ALKQ9UM73 1620 aa23.86■■□□□ 1.41
LMNA-207ENST00000368301 KIF13AQ9H1H9 1805 aa23.85■■□□□ 1.41
LMNA-207ENST00000368301 MTHFSP49914 203 aa23.85■■□□□ 1.41
LMNA-207ENST00000368301 FANCIQ9NVI1 1328 aa23.84■■□□□ 1.41
LMNA-207ENST00000368301 A0A1W2PP64 1363 aa23.84■■□□□ 1.41
LMNA-207ENST00000368301 TRMT2AQ8IZ69 625 aaKnown RBP23.84■■□□□ 1.41
LMNA-207ENST00000368301 POGKQ9P215 609 aa23.84■■□□□ 1.41
LMNA-207ENST00000368301 A2ML1A8K2U0 1454 aa23.83■■□□□ 1.41
LMNA-207ENST00000368301 SPATA31D1Q6ZQQ2 1576 aa23.82■■□□□ 1.4
LMNA-207ENST00000368301 PPP6R1Q9UPN7 881 aa23.82■■□□□ 1.4
LMNA-207ENST00000368301 ARHGEF40Q8TER5 1519 aa23.8■■□□□ 1.4
LMNA-207ENST00000368301 RRP7AQ9Y3A4 280 aaKnown RBP23.78■■□□□ 1.4
LMNA-207ENST00000368301 RIMS2Q9UQ26 1411 aa23.78■■□□□ 1.4
LMNA-207ENST00000368301 CD163L1Q9NR16 1453 aa23.77■■□□□ 1.4
LMNA-207ENST00000368301 NEUROD2Q15784 382 aa23.76■■□□□ 1.39
LMNA-207ENST00000368301 ANP32EQ9BTT0 268 aa23.76■■□□□ 1.39
LMNA-207ENST00000368301 GGNBP2Q9H3C7 697 aa23.76■■□□□ 1.39
LMNA-207ENST00000368301 ABCC11Q96J66 1382 aa23.76■■□□□ 1.39
LMNA-207ENST00000368301 WWC1Q8IX03 1113 aa23.76■■□□□ 1.39
LMNA-207ENST00000368301 NSD2O96028 1365 aa23.76■■□□□ 1.39
LMNA-207ENST00000368301 WAPLQ7Z5K2 1190 aa23.75■■□□□ 1.39
LMNA-207ENST00000368301 CDK19Q9BWU1 502 aa23.75■■□□□ 1.39
LMNA-207ENST00000368301 NKTRP30414 1462 aaKnown RBP23.75■■□□□ 1.39
LMNA-207ENST00000368301 E9PSI1 815 aa23.75■■□□□ 1.39
LMNA-207ENST00000368301 ATAD2Q6PL18 1390 aa23.74■■□□□ 1.39
LMNA-207ENST00000368301 RUNDC1Q96C34 613 aa23.73■■□□□ 1.39
LMNA-207ENST00000368301 NINLQ9Y2I6 1382 aa23.73■■□□□ 1.39
LMNA-207ENST00000368301 TCP11L2Q8N4U5 519 aa23.73■■□□□ 1.39
LMNA-207ENST00000368301 BCAR3O75815 825 aa23.72■■□□□ 1.39
LMNA-207ENST00000368301 SKAP1Q86WV1 359 aa23.72■■□□□ 1.39
LMNA-207ENST00000368301 ZMYM3Q14202 1370 aa23.72■■□□□ 1.39
LMNA-207ENST00000368301 SETD1AO15047 1707 aaKnown RBP23.72■■□□□ 1.39
LMNA-207ENST00000368301 IQSEC2Q5JU85 1478 aa23.72■■□□□ 1.39
LMNA-207ENST00000368301 CFAP53Q96M91 514 aa23.72■■□□□ 1.39
LMNA-207ENST00000368301 FYB1O15117 783 aa23.7■■□□□ 1.38
LMNA-207ENST00000368301 CABP1Q9NZU7 370 aa23.7■■□□□ 1.38
LMNA-207ENST00000368301 NGEFQ8N5V2 710 aa23.69■■□□□ 1.38
LMNA-207ENST00000368301 TERF2IPQ9NYB0 399 aa23.69■■□□□ 1.38
LMNA-207ENST00000368301 NLRP1Q9C000 1473 aa23.69■■□□□ 1.38
LMNA-207ENST00000368301 NRXN3Q9Y4C0 1643 aa23.68■■□□□ 1.38
LMNA-207ENST00000368301 U2AF1L5P0DN76 240 aaPredicted RBP23.68■■□□□ 1.38
LMNA-207ENST00000368301 U2AF1Q01081 240 aaKnown RBP eCLIP23.68■■□□□ 1.38
LMNA-207ENST00000368301 ESF1Q9H501 851 aaKnown RBP23.68■■□□□ 1.38
LMNA-207ENST00000368301 METP08581 1390 aa23.66■■□□□ 1.38
LMNA-207ENST00000368301 PHF23Q9BUL5 403 aaPredicted RBP23.66■■□□□ 1.38
LMNA-207ENST00000368301 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.65■■□□□ 1.38
LMNA-207ENST00000368301 DLC1Q96QB1 1528 aa23.65■■□□□ 1.38
LMNA-207ENST00000368301 HDGFL2Q7Z4V5 671 aaPredicted RBP23.64■■□□□ 1.37
LMNA-207ENST00000368301 COL3A1P02461 1466 aaPredicted RBP23.62■■□□□ 1.37
LMNA-207ENST00000368301 ANKRD26Q9UPS8 1709 aa23.62■■□□□ 1.37
LMNA-207ENST00000368301 TCERG1O14776 1098 aaKnown RBP23.61■■□□□ 1.37
LMNA-207ENST00000368301 KDM2BQ8NHM5 1336 aa23.61■■□□□ 1.37
LMNA-207ENST00000368301 TXNDC2Q86VQ3 553 aa23.61■■□□□ 1.37
LMNA-207ENST00000368301 U2SURPO15042 1029 aaKnown RBP23.6■■□□□ 1.37
LMNA-207ENST00000368301 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.6■■□□□ 1.37
LMNA-207ENST00000368301 FBLN1P23142 703 aa23.6■■□□□ 1.37
LMNA-207ENST00000368301 TNRQ92752 1358 aa23.59■■□□□ 1.37
LMNA-207ENST00000368301 MED14O60244 1454 aa23.59■■□□□ 1.37
LMNA-207ENST00000368301 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.58■■□□□ 1.375e-9■□□□□ 8
LMNA-207ENST00000368301 ADGRB2O60241 1585 aa23.57■■□□□ 1.36
LMNA-207ENST00000368301 KIF20BQ96Q89 1820 aa23.57■■□□□ 1.36
LMNA-207ENST00000368301 WDR63Q8IWG1 891 aa23.57■■□□□ 1.36
LMNA-207ENST00000368301 CCDC27Q2M243 656 aa23.56■■□□□ 1.36
LMNA-207ENST00000368301 PLEKHF1Q96S99 279 aa23.56■■□□□ 1.36
LMNA-207ENST00000368301 NCKAP5LQ9HCH0 1330 aa23.56■■□□□ 1.36
LMNA-207ENST00000368301 PDE4AP27815 886 aa23.55■■□□□ 1.36
LMNA-207ENST00000368301 WASLO00401 505 aaPredicted RBP23.54■■□□□ 1.36
LMNA-207ENST00000368301 ATP7BP35670 1465 aa23.53■■□□□ 1.36
LMNA-207ENST00000368301 RARSP54136 660 aaKnown RBP23.53■■□□□ 1.36
LMNA-207ENST00000368301 PANK1Q8TE04 598 aa23.53■■□□□ 1.36
LMNA-207ENST00000368301 UBR1Q8IWV7 1749 aa23.52■■□□□ 1.36
LMNA-207ENST00000368301 CEBPAP49715 358 aaPredicted RBP23.52■■□□□ 1.36
LMNA-207ENST00000368301 CENPQQ7L2Z9 268 aaPredicted RBP23.52■■□□□ 1.36
LMNA-207ENST00000368301 TMEM2Q9UHN6 1383 aa23.52■■□□□ 1.36
LMNA-207ENST00000368301 PPIP5K1Q6PFW1 1433 aa23.51■■□□□ 1.35
LMNA-207ENST00000368301 MS4A1P11836 297 aa23.51■■□□□ 1.35
LMNA-207ENST00000368301 FRAT1Q92837 279 aaPredicted RBP23.51■■□□□ 1.35
LMNA-207ENST00000368301 BCL2L13Q9BXK5 485 aa23.51■■□□□ 1.35
LMNA-207ENST00000368301 MYT1Q01538 1121 aa23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms