RNA–Protein interactions for RNA: ENST00000368292.10

ECHDC1-204, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 854 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-204ENST00000368292 NUTM1Q86Y26 1132 aa8.92□□□□□ -0.98
ECHDC1-204ENST00000368292 SCUBE3Q8IX30 993 aa8.91□□□□□ -0.98
ECHDC1-204ENST00000368292 TBC1D2Q9BYX2 928 aa8.91□□□□□ -0.98
ECHDC1-204ENST00000368292 PLA2G2EQ9NZK7 142 aa8.91□□□□□ -0.98
ECHDC1-204ENST00000368292 SLC27A5Q9Y2P5 690 aa8.91□□□□□ -0.98
ECHDC1-204ENST00000368292 MRC2Q9UBG0 1479 aa8.9□□□□□ -0.98
ECHDC1-204ENST00000368292 ZPR1O75312 459 aa8.9□□□□□ -0.98
ECHDC1-204ENST00000368292 MYT1Q01538 1121 aa8.9□□□□□ -0.98
ECHDC1-204ENST00000368292 KCNC4Q03721 635 aa8.9□□□□□ -0.98
ECHDC1-204ENST00000368292 IFFO2Q5TF58 517 aa8.9□□□□□ -0.98
ECHDC1-204ENST00000368292 CYB5RLQ6IPT4 315 aa8.9□□□□□ -0.98
ECHDC1-204ENST00000368292 MOXD2PA6NHM9 499 aa8.89□□□□□ -0.99
ECHDC1-204ENST00000368292 NR1I2O75469 434 aa8.89□□□□□ -0.99
ECHDC1-204ENST00000368292 NDUFV2P19404 249 aa8.89□□□□□ -0.99
ECHDC1-204ENST00000368292 GUCA2AQ02747 115 aa8.89□□□□□ -0.99
ECHDC1-204ENST00000368292 GRIPAP1Q4V328 841 aa8.89□□□□□ -0.99
ECHDC1-204ENST00000368292 DDRGK1Q96HY6 314 aa8.89□□□□□ -0.99
ECHDC1-204ENST00000368292 TIMELESSQ9UNS1 1208 aa8.89□□□□□ -0.99
ECHDC1-204ENST00000368292 ARAP1Q96P48 1450 aa8.89□□□□□ -0.99
ECHDC1-204ENST00000368292 NKX2-3Q8TAU0 364 aa8.88□□□□□ -0.99
ECHDC1-204ENST00000368292 THAP11Q96EK4 314 aa8.88□□□□□ -0.99
ECHDC1-204ENST00000368292 DIXDC1Q155Q3 683 aa8.87□□□□□ -0.99
ECHDC1-204ENST00000368292 MYSM1Q5VVJ2 828 aa8.87□□□□□ -0.99
ECHDC1-204ENST00000368292 PCDHGC3Q9UN70 934 aa8.87□□□□□ -0.99
ECHDC1-204ENST00000368292 PDS5BQ9NTI5 1447 aa8.87□□□□□ -0.99
ECHDC1-204ENST00000368292 TLL1O43897 1013 aa8.86□□□□□ -0.99
ECHDC1-204ENST00000368292 BRICD5Q6PL45 260 aa8.86□□□□□ -0.99
ECHDC1-204ENST00000368292 IL27Q8NEV9 243 aa8.86□□□□□ -0.99
ECHDC1-204ENST00000368292 SALL2Q9Y467 1007 aaPredicted RBP8.86□□□□□ -0.99
ECHDC1-204ENST00000368292 SPTLC1O15269 473 aa8.85□□□□□ -0.99
ECHDC1-204ENST00000368292 FDX1P10109 184 aa8.85□□□□□ -0.99
ECHDC1-204ENST00000368292 RSBN1LQ6PCB5 846 aaPredicted RBP8.85□□□□□ -0.99
ECHDC1-204ENST00000368292 RNF19BQ6ZMZ0 732 aa8.85□□□□□ -0.99
ECHDC1-204ENST00000368292 GJA5P36382 358 aa8.84□□□□□ -0.99
ECHDC1-204ENST00000368292 RIC3Q7Z5B4 369 aa8.84□□□□□ -0.99
ECHDC1-204ENST00000368292 LIMD1Q9UGP4 676 aa8.84□□□□□ -0.99
ECHDC1-204ENST00000368292 PCDHB15Q9Y5E8 787 aa8.84□□□□□ -0.99
ECHDC1-204ENST00000368292 SPSB2Q99619 263 aa8.83□□□□□ -1
ECHDC1-204ENST00000368292 RSPH6AQ9H0K4 717 aa8.83□□□□□ -1
ECHDC1-204ENST00000368292 FMNL1O95466 1100 aaPredicted RBP8.82□□□□□ -1
ECHDC1-204ENST00000368292 ADH1BP00325 375 aa8.82□□□□□ -1
ECHDC1-204ENST00000368292 Q3C1V9 767 aa8.82□□□□□ -1
ECHDC1-204ENST00000368292 SH3D19Q5HYK7 790 aa8.82□□□□□ -1
ECHDC1-204ENST00000368292 FAM160A2Q8N612 972 aaPredicted RBP8.82□□□□□ -1
ECHDC1-204ENST00000368292 SYMPKQ92797 1274 aaKnown RBP8.82□□□□□ -1
ECHDC1-204ENST00000368292 SKIV2LQ15477 1246 aaKnown RBP8.81□□□□□ -1
ECHDC1-204ENST00000368292 ARXQ96QS3 562 aa8.81□□□□□ -1
ECHDC1-204ENST00000368292 POLR3EQ9NVU0 708 aa8.81□□□□□ -1
ECHDC1-204ENST00000368292 CLK2P49760 499 aaKnown RBP8.8□□□□□ -1
ECHDC1-204ENST00000368292 TUSC1Q2TAM9 212 aa8.8□□□□□ -1
ECHDC1-204ENST00000368292 A0A0G2JS52 829 aa8.79□□□□□ -1
ECHDC1-204ENST00000368292 PROCA1Q8NCQ7 364 aaPredicted RBP8.79□□□□□ -1
ECHDC1-204ENST00000368292 FBXO31Q5XUX0 539 aaPredicted RBP8.78□□□□□ -1
ECHDC1-204ENST00000368292 PPP1R18Q6NYC8 613 aa8.78□□□□□ -1
ECHDC1-204ENST00000368292 USB1Q9BQ65 265 aaKnown RBP8.78□□□□□ -1
ECHDC1-204ENST00000368292 GOPCQ9HD26 462 aa8.78□□□□□ -1
ECHDC1-204ENST00000368292 BAZ1BQ9UIG0 1483 aaKnown RBP8.77□□□□□ -1
ECHDC1-204ENST00000368292 S1PR4O95977 384 aa8.77□□□□□ -1.01
ECHDC1-204ENST00000368292 HRCP23327 699 aa8.77□□□□□ -1.01
ECHDC1-204ENST00000368292 QPCTQ16769 361 aa8.77□□□□□ -1.01
ECHDC1-204ENST00000368292 MSS51Q4VC12 460 aa8.77□□□□□ -1.01
ECHDC1-204ENST00000368292 CABLES1Q8TDN4 633 aa8.77□□□□□ -1.01
ECHDC1-204ENST00000368292 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.77□□□□□ -1.01
ECHDC1-204ENST00000368292 SLC6A16Q9GZN6 736 aa8.77□□□□□ -1.01
ECHDC1-204ENST00000368292 PRDM9Q9NQV7 894 aa8.77□□□□□ -1.01
ECHDC1-204ENST00000368292 SMARCA4P51532 1647 aa8.76□□□□□ -1.01
ECHDC1-204ENST00000368292 C6orf229H3BNL8 230 aa8.76□□□□□ -1.01
ECHDC1-204ENST00000368292 LILRB3O75022 631 aa8.76□□□□□ -1.01
ECHDC1-204ENST00000368292 MTMR2Q13614 643 aa8.76□□□□□ -1.01
ECHDC1-204ENST00000368292 CSPP1Q1MSJ5 1256 aa8.76□□□□□ -1.01
ECHDC1-204ENST00000368292 PRPF38BQ5VTL8 546 aaKnown RBP8.76□□□□□ -1.01
ECHDC1-204ENST00000368292 RETREG3Q86VR2 466 aa8.76□□□□□ -1.01
ECHDC1-204ENST00000368292 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.75□□□□□ -1.01
ECHDC1-204ENST00000368292 RNF223E7ERA6 249 aa8.74□□□□□ -1.01
ECHDC1-204ENST00000368292 PPEF1O14829 653 aaPredicted RBP8.74□□□□□ -1.01
ECHDC1-204ENST00000368292 RTL5Q5HYW3 569 aaPredicted RBP8.74□□□□□ -1.01
ECHDC1-204ENST00000368292 ZBTB3Q9H5J0 574 aa8.74□□□□□ -1.01
ECHDC1-204ENST00000368292 SPDYE5A6NIY4 337 aa8.73□□□□□ -1.01
ECHDC1-204ENST00000368292 CFAP99D6REC4 459 aa8.73□□□□□ -1.01
ECHDC1-204ENST00000368292 MMP16P51512 607 aa8.73□□□□□ -1.01
ECHDC1-204ENST00000368292 DXOO77932 396 aaKnown RBP8.72□□□□□ -1.01
ECHDC1-204ENST00000368292 ERICH6Q7L0X2 663 aa8.72□□□□□ -1.01
ECHDC1-204ENST00000368292 PRR7Q8TB68 274 aa8.72□□□□□ -1.01
ECHDC1-204ENST00000368292 PPP2R2DQ66LE6 453 aa8.71□□□□□ -1.02
ECHDC1-204ENST00000368292 CADPSQ9ULU8 1353 aa8.71□□□□□ -1.02
ECHDC1-204ENST00000368292 CEP164Q9UPV0 1460 aa8.7□□□□□ -1.02
ECHDC1-204ENST00000368292 NUTM2BA6NNL0 878 aaPredicted RBP8.7□□□□□ -1.02
ECHDC1-204ENST00000368292 NUTM2EB1AL46 878 aaPredicted RBP8.7□□□□□ -1.02
ECHDC1-204ENST00000368292 JUNDP17535 347 aa8.7□□□□□ -1.02
ECHDC1-204ENST00000368292 GGCXP38435 758 aa8.7□□□□□ -1.02
ECHDC1-204ENST00000368292 NUTM2DQ5VT03 806 aaPredicted RBP8.7□□□□□ -1.02
ECHDC1-204ENST00000368292 NUTM2AQ8IVF1 878 aaPredicted RBP8.7□□□□□ -1.02
ECHDC1-204ENST00000368292 ANKLE1Q8NAG6 615 aa8.7□□□□□ -1.02
ECHDC1-204ENST00000368292 EMID1Q96A84 441 aaPredicted RBP8.7□□□□□ -1.02
ECHDC1-204ENST00000368292 PCMTD1Q96MG8 357 aaPredicted RBP8.7□□□□□ -1.02
ECHDC1-204ENST00000368292 PLA2G2CQ5R387 149 aa8.69□□□□□ -1.02
ECHDC1-204ENST00000368292 DESI1Q6ICB0 168 aa8.69□□□□□ -1.02
ECHDC1-204ENST00000368292 PEG3Q9GZU2 1588 aa8.69□□□□□ -1.02
ECHDC1-204ENST00000368292 C14orf37Q86TY3 774 aa8.68□□□□□ -1.02
ECHDC1-204ENST00000368292 ZNF608Q9ULD9 1512 aaPredicted RBP8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms