RNA–Protein interactions for RNA: ENST00000368256.3

CCT3-202, Transcript of chaperonin containing TCP1 subunit 3, humanhuman

TSL 3

Gene CCT3, Length 1,063 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT3-202ENST00000368256 SEC24BO95487 1268 aa15.28■□□□□ 0.04
CCT3-202ENST00000368256 FAM50AQ14320 339 aaKnown RBP15.28■□□□□ 0.04
CCT3-202ENST00000368256 PPARGC1BQ86YN6 1023 aaKnown RBP15.28■□□□□ 0.04
CCT3-202ENST00000368256 ANKRD50Q9ULJ7 1429 aa15.27■□□□□ 0.04
CCT3-202ENST00000368256 TMEM2Q9UHN6 1383 aa15.27■□□□□ 0.04
CCT3-202ENST00000368256 TXNDC2Q86VQ3 553 aa15.27■□□□□ 0.04
CCT3-202ENST00000368256 MYO5BQ9ULV0 1848 aa15.27■□□□□ 0.03
CCT3-202ENST00000368256 UNC13BO14795 1591 aa15.26■□□□□ 0.03
CCT3-202ENST00000368256 TET3O43151 1660 aa15.25■□□□□ 0.03
CCT3-202ENST00000368256 POTEJP0CG39 1038 aa15.25■□□□□ 0.03
CCT3-202ENST00000368256 TOM1O60784 492 aa15.24■□□□□ 0.03
CCT3-202ENST00000368256 HSPA1LP34931 641 aa15.24■□□□□ 0.03
CCT3-202ENST00000368256 OTUD5Q96G74 571 aa15.24■□□□□ 0.03
CCT3-202ENST00000368256 GCC2Q8IWJ2 1684 aa15.24■□□□□ 0.03
CCT3-202ENST00000368256 ADGRB3O60242 1522 aa15.23■□□□□ 0.03
CCT3-202ENST00000368256 RPRD2Q5VT52 1461 aaKnown RBP15.23■□□□□ 0.03
CCT3-202ENST00000368256 PIP4K2BP78356 416 aa15.22■□□□□ 0.03
CCT3-202ENST00000368256 IRX5P78411 483 aaPredicted RBP15.22■□□□□ 0.03
CCT3-202ENST00000368256 RNF25Q96BH1 459 aaPredicted RBP15.22■□□□□ 0.03
CCT3-202ENST00000368256 ROCK1Q13464 1354 aa15.22■□□□□ 0.03
CCT3-202ENST00000368256 E9PCH4 1651 aa15.22■□□□□ 0.03
CCT3-202ENST00000368256 TMEM131LA2VDJ0 1609 aa15.2■□□□□ 0.02
CCT3-202ENST00000368256 IQGAP3Q86VI3 1631 aa15.19■□□□□ 0.02
CCT3-202ENST00000368256 RIOK3O14730 519 aaKnown RBP15.19■□□□□ 0.02
CCT3-202ENST00000368256 SLC52A1Q9NWF4 448 aa15.19■□□□□ 0.02
CCT3-202ENST00000368256 EID1Q9Y6B2 187 aa15.19■□□□□ 0.02
CCT3-202ENST00000368256 ZFYVE9O95405 1425 aa15.18■□□□□ 0.02
CCT3-202ENST00000368256 PLCG2P16885 1265 aa15.18■□□□□ 0.02
CCT3-202ENST00000368256 GOLGA2Q08379 1002 aa15.18■□□□□ 0.02
CCT3-202ENST00000368256 MED1Q15648 1581 aaPredicted RBP15.17■□□□□ 0.02
CCT3-202ENST00000368256 MAMSTRQ6ZN01 415 aa15.17■□□□□ 0.02
CCT3-202ENST00000368256 OCEL1Q9H607 264 aa15.17■□□□□ 0.02
CCT3-202ENST00000368256 MKRN3Q13064 507 aaKnown RBP15.16■□□□□ 0.02
CCT3-202ENST00000368256 NWD1Q149M9 1564 aa15.15■□□□□ 0.02
CCT3-202ENST00000368256 SOCS7O14512 581 aa15.15■□□□□ 0.02
CCT3-202ENST00000368256 CHD2O14647 1828 aaKnown RBP15.15■□□□□ 0.02
CCT3-202ENST00000368256 ECM2O94769 699 aaPredicted RBP15.14■□□□□ 0.01
CCT3-202ENST00000368256 KCNA6P17658 529 aa15.14■□□□□ 0.01
CCT3-202ENST00000368256 HRCP23327 699 aa15.14■□□□□ 0.01
CCT3-202ENST00000368256 ZEB1P37275 1124 aaPredicted RBP15.14■□□□□ 0.01
CCT3-202ENST00000368256 SLC26A8Q96RN1 970 aa15.14■□□□□ 0.01
CCT3-202ENST00000368256 VGFO15240 615 aaPredicted RBP15.12■□□□□ 0.01
CCT3-202ENST00000368256 CABP2Q9NPB3 220 aa15.12■□□□□ 0.01
CCT3-202ENST00000368256 TMEM94Q12767 1356 aa15.11■□□□□ 0.01
CCT3-202ENST00000368256 RRBP1Q9P2E9 1410 aaKnown RBP15.11■□□□□ 0.01
CCT3-202ENST00000368256 RIMS2Q9UQ26 1411 aa15.11■□□□□ 0.01
CCT3-202ENST00000368256 PLEKHG1Q9ULL1 1385 aa15.11■□□□□ 0.01
CCT3-202ENST00000368256 SCUBE2Q9NQ36 999 aa15.1■□□□□ 0.01
CCT3-202ENST00000368256 NUP155O75694 1391 aa15.1■□□□□ 0.01
CCT3-202ENST00000368256 NKTRP30414 1462 aaKnown RBP15.09■□□□□ 0.01
CCT3-202ENST00000368256 ITGAEP38570 1179 aa15.09■□□□□ 0.01
CCT3-202ENST00000368256 RBM33Q96EV2 1170 aaKnown RBP15.09■□□□□ 0.01
CCT3-202ENST00000368256 ADAMTS13Q76LX8 1427 aa15.09■□□□□ 0.01
CCT3-202ENST00000368256 FAM135BQ49AJ0 1406 aa15.08■□□□□ 0
CCT3-202ENST00000368256 SPHKAPQ2M3C7 1700 aa15.07■□□□□ 0
CCT3-202ENST00000368256 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.07■□□□□ 0
CCT3-202ENST00000368256 PDCD7Q8N8D1 485 aaKnown RBP15.07■□□□□ 0
CCT3-202ENST00000368256 ZFP91Q96JP5 570 aaPredicted RBP15.07■□□□□ 0
CCT3-202ENST00000368256 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.06■□□□□ 02e-10■□□□□ 11.3
CCT3-202ENST00000368256 ROBO1Q9Y6N7 1651 aa15.06■□□□□ 0
CCT3-202ENST00000368256 PROSER2Q86WR7 435 aaPredicted RBP15.05■□□□□ -0
CCT3-202ENST00000368256 TAOK2Q9UL54 1235 aa15.05■□□□□ -0
CCT3-202ENST00000368256 TBX22Q9Y458 520 aa15.05■□□□□ -0
CCT3-202ENST00000368256 NRXN3Q9Y4C0 1643 aa15.04■□□□□ -0
CCT3-202ENST00000368256 NUTM2DQ5VT03 806 aaPredicted RBP15.04■□□□□ -0
CCT3-202ENST00000368256 NAIPQ13075 1403 aa15.03■□□□□ -0
CCT3-202ENST00000368256 DIP2AQ14689 1571 aa15.02■□□□□ -0
CCT3-202ENST00000368256 RGL2O15211 777 aa15.02■□□□□ -0
CCT3-202ENST00000368256 CHGAP10645 457 aaKnown RBP15.02■□□□□ -0
CCT3-202ENST00000368256 HDGFP51858 240 aaKnown RBP15.02■□□□□ -0
CCT3-202ENST00000368256 PTPRUQ92729 1446 aa15.01□□□□□ -0.01
CCT3-202ENST00000368256 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.01□□□□□ -0.01
CCT3-202ENST00000368256 BCANQ96GW7 911 aa15.01□□□□□ -0.01
CCT3-202ENST00000368256 CLTCL1P53675 1640 aa15.01□□□□□ -0.01
CCT3-202ENST00000368256 PPP1R15AO75807 674 aaPredicted RBP15□□□□□ -0.01
CCT3-202ENST00000368256 EFCAB3Q8N7B9 438 aa15□□□□□ -0.01
CCT3-202ENST00000368256 RGS17Q9UGC6 210 aaPredicted RBP15□□□□□ -0.01
CCT3-202ENST00000368256 PIK3R4Q99570 1358 aa14.99□□□□□ -0.01
CCT3-202ENST00000368256 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.99□□□□□ -0.01
CCT3-202ENST00000368256 NCOA3Q9Y6Q9 1424 aa14.99□□□□□ -0.01
CCT3-202ENST00000368256 SETBP1Q9Y6X0 1596 aa14.98□□□□□ -0.01
CCT3-202ENST00000368256 MSH6P52701 1360 aa14.98□□□□□ -0.01
CCT3-202ENST00000368256 XRN1Q8IZH2 1706 aaKnown RBP14.97□□□□□ -0.01
CCT3-202ENST00000368256 TRPM2O94759 1503 aa14.97□□□□□ -0.01
CCT3-202ENST00000368256 NEXMIFQ5QGS0 1516 aa14.97□□□□□ -0.01
CCT3-202ENST00000368256 PHLPP1O60346 1717 aa14.96□□□□□ -0.01
CCT3-202ENST00000368256 SLAIN2Q9P270 581 aa14.96□□□□□ -0.01
CCT3-202ENST00000368256 KIF1BO60333 1816 aa14.96□□□□□ -0.01
CCT3-202ENST00000368256 HFM1A2PYH4 1435 aa14.95□□□□□ -0.02
CCT3-202ENST00000368256 CCER1Q8TC90 406 aaPredicted RBP14.94□□□□□ -0.02
CCT3-202ENST00000368256 L3MBTL3Q96JM7 780 aaPredicted RBP14.94□□□□□ -0.02
CCT3-202ENST00000368256 BCL11BQ9C0K0 894 aaPredicted RBP14.94□□□□□ -0.02
CCT3-202ENST00000368256 COL16A1Q07092 1604 aaPredicted RBP14.94□□□□□ -0.02
CCT3-202ENST00000368256 SETD1AO15047 1707 aaKnown RBP14.93□□□□□ -0.02
CCT3-202ENST00000368256 AMOTL2Q9Y2J4 779 aa14.93□□□□□ -0.02
CCT3-202ENST00000368256 METP08581 1390 aa14.92□□□□□ -0.02
CCT3-202ENST00000368256 SOX12O15370 315 aa14.91□□□□□ -0.02
CCT3-202ENST00000368256 DPY19L2Q6NUT2 758 aa14.91□□□□□ -0.02
CCT3-202ENST00000368256 C19orf44Q9H6X5 657 aa14.9□□□□□ -0.02
CCT3-202ENST00000368256 STK24Q9Y6E0 443 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms