RNA–Protein interactions for RNA: ENST00000368046.7

CD48-202, Transcript of CD48 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD48, Length 1,126 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-202ENST00000368046 PIK3C2GO75747 1445 aa14.32□□□□□ -0.12
CD48-202ENST00000368046 SIRT1Q96EB6 747 aa14.31□□□□□ -0.12
CD48-202ENST00000368046 ZBTB12Q9Y330 459 aaPredicted RBP14.31□□□□□ -0.12
CD48-202ENST00000368046 DHX57Q6P158 1386 aaKnown RBP14.3□□□□□ -0.12
CD48-202ENST00000368046 ABCC11Q96J66 1382 aa14.3□□□□□ -0.12
CD48-202ENST00000368046 ROBO2Q9HCK4 1378 aa14.3□□□□□ -0.12
CD48-202ENST00000368046 LRPPRCP42704 1394 aaKnown RBP14.29□□□□□ -0.12
CD48-202ENST00000368046 MYOM2P54296 1465 aa14.29□□□□□ -0.12
CD48-202ENST00000368046 NRXN1Q9ULB1 1477 aa14.29□□□□□ -0.12
CD48-202ENST00000368046 XRN1Q8IZH2 1706 aaKnown RBP14.29□□□□□ -0.12
CD48-202ENST00000368046 PTCH1Q13635 1447 aa14.28□□□□□ -0.12
CD48-202ENST00000368046 WAPLQ7Z5K2 1190 aa14.28□□□□□ -0.12
CD48-202ENST00000368046 DCCP43146 1447 aa14.27□□□□□ -0.12
CD48-202ENST00000368046 PRAG1Q86YV5 1406 aa14.27□□□□□ -0.12
CD48-202ENST00000368046 PITPNM1O00562 1244 aa14.27□□□□□ -0.13
CD48-202ENST00000368046 FXR2P51116 673 aaKnown RBP eCLIP14.27□□□□□ -0.13
CD48-202ENST00000368046 SIN3AQ96ST3 1273 aa14.27□□□□□ -0.13
CD48-202ENST00000368046 IFT172Q9UG01 1749 aa14.27□□□□□ -0.13
CD48-202ENST00000368046 YTHDC2Q9H6S0 1430 aaKnown RBP14.25□□□□□ -0.13
CD48-202ENST00000368046 ADGRL3Q9HAR2 1447 aa14.25□□□□□ -0.13
CD48-202ENST00000368046 SETD1AO15047 1707 aaKnown RBP14.25□□□□□ -0.13
CD48-202ENST00000368046 NEUROD1Q13562 356 aa14.25□□□□□ -0.13
CD48-202ENST00000368046 TECPR2O15040 1411 aa14.24□□□□□ -0.13
CD48-202ENST00000368046 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.24□□□□□ -0.13
CD48-202ENST00000368046 BRINP3Q76B58 766 aa14.24□□□□□ -0.13
CD48-202ENST00000368046 L3MBTL2Q969R5 705 aa14.23□□□□□ -0.13
CD48-202ENST00000368046 POGKQ9P215 609 aa14.22□□□□□ -0.13
CD48-202ENST00000368046 TRAK1Q9UPV9 953 aa14.22□□□□□ -0.13
CD48-202ENST00000368046 PRAM1Q96QH2 718 aa14.21□□□□□ -0.13
CD48-202ENST00000368046 MST1RQ04912 1400 aa14.21□□□□□ -0.13
CD48-202ENST00000368046 ROBO1Q9Y6N7 1651 aa14.2□□□□□ -0.14
CD48-202ENST00000368046 EVX2Q03828 476 aa14.2□□□□□ -0.14
CD48-202ENST00000368046 ORAI2Q96SN7 254 aa14.2□□□□□ -0.14
CD48-202ENST00000368046 DISP3Q9P2K9 1392 aa14.2□□□□□ -0.14
CD48-202ENST00000368046 PLEKHH1Q9ULM0 1364 aa14.2□□□□□ -0.14
CD48-202ENST00000368046 ASXL1Q8IXJ9 1541 aa14.2□□□□□ -0.14
CD48-202ENST00000368046 PCGF6Q9BYE7 350 aa14.18□□□□□ -0.14
CD48-202ENST00000368046 ATF5Q9Y2D1 282 aaPredicted RBP14.18□□□□□ -0.14
CD48-202ENST00000368046 C1orf167Q5SNV9 1468 aa14.18□□□□□ -0.14
CD48-202ENST00000368046 LAMC1P11047 1609 aa14.17□□□□□ -0.14
CD48-202ENST00000368046 SAFB2Q14151 953 aaKnown RBP eCLIP14.17□□□□□ -0.14
CD48-202ENST00000368046 NBPF1Q3BBV0 1214 aa14.17□□□□□ -0.14
CD48-202ENST00000368046 ESCO1Q5FWF5 840 aa14.17□□□□□ -0.14
CD48-202ENST00000368046 LRRC59Q96AG4 307 aaKnown RBP14.17□□□□□ -0.14
CD48-202ENST00000368046 ZBTB22O15209 634 aa14.16□□□□□ -0.14
CD48-202ENST00000368046 ADGRB1O14514 1584 aa14.16□□□□□ -0.14
CD48-202ENST00000368046 JCADQ9P266 1359 aa14.15□□□□□ -0.14
CD48-202ENST00000368046 NUTM2FA1L443 756 aa14.15□□□□□ -0.14
CD48-202ENST00000368046 DDX17Q92841 729 aaKnown RBP14.15□□□□□ -0.14
CD48-202ENST00000368046 NALCNQ8IZF0 1738 aa14.15□□□□□ -0.14
CD48-202ENST00000368046 DLC1Q96QB1 1528 aa14.14□□□□□ -0.15
CD48-202ENST00000368046 KNDC1Q76NI1 1749 aa14.12□□□□□ -0.15
CD48-202ENST00000368046 FOXO3O43524 673 aa14.12□□□□□ -0.15
CD48-202ENST00000368046 SOS2Q07890 1332 aaPredicted RBP14.12□□□□□ -0.15
CD48-202ENST00000368046 SPATA31A6Q5VVP1 1343 aa14.12□□□□□ -0.15
CD48-202ENST00000368046 AHDC1Q5TGY3 1603 aaPredicted RBP14.12□□□□□ -0.15
CD48-202ENST00000368046 WASLO00401 505 aaPredicted RBP14.11□□□□□ -0.15
CD48-202ENST00000368046 PHLPP1O60346 1717 aa14.11□□□□□ -0.15
CD48-202ENST00000368046 HIRIP3Q9BW71 556 aaPredicted RBP14.11□□□□□ -0.15
CD48-202ENST00000368046 NPHP3Q7Z494 1330 aa14.11□□□□□ -0.15
CD48-202ENST00000368046 MINK1Q8N4C8 1332 aaPredicted RBP14.11□□□□□ -0.15
CD48-202ENST00000368046 CDC42BPGQ6DT37 1551 aa14.1□□□□□ -0.15
CD48-202ENST00000368046 TONSLQ96HA7 1378 aa14.09□□□□□ -0.15
CD48-202ENST00000368046 NBPF8Q3BBV2 869 aa14.09□□□□□ -0.15
CD48-202ENST00000368046 PHF8Q9UPP1 1060 aa14.09□□□□□ -0.15
CD48-202ENST00000368046 COL16A1Q07092 1604 aaPredicted RBP14.08□□□□□ -0.15
CD48-202ENST00000368046 ILDR2Q71H61 639 aa14.07□□□□□ -0.16
CD48-202ENST00000368046 KRT28Q7Z3Y7 464 aa14.07□□□□□ -0.16
CD48-202ENST00000368046 FOXD4L1Q9NU39 408 aa14.07□□□□□ -0.16
CD48-202ENST00000368046 MED1Q15648 1581 aaPredicted RBP14.07□□□□□ -0.16
CD48-202ENST00000368046 PSME1Q06323 249 aa14.06□□□□□ -0.16
CD48-202ENST00000368046 CDK19Q9BWU1 502 aa14.06□□□□□ -0.16
CD48-202ENST00000368046 CLSPNQ9HAW4 1339 aa14.06□□□□□ -0.16
CD48-202ENST00000368046 KIAA1210Q9ULL0 1709 aa14.06□□□□□ -0.16
CD48-202ENST00000368046 NUTM2BA6NNL0 878 aaPredicted RBP14.05□□□□□ -0.16
CD48-202ENST00000368046 NUTM2EB1AL46 878 aaPredicted RBP14.05□□□□□ -0.16
CD48-202ENST00000368046 XPCQ01831 940 aaPredicted RBP14.05□□□□□ -0.16
CD48-202ENST00000368046 NUTM2AQ8IVF1 878 aaPredicted RBP14.05□□□□□ -0.16
CD48-202ENST00000368046 PMFBP1Q8TBY8 1022 aa14.05□□□□□ -0.16
CD48-202ENST00000368046 RGS17Q9UGC6 210 aaPredicted RBP14.05□□□□□ -0.16
CD48-202ENST00000368046 TIMELESSQ9UNS1 1208 aa14.05□□□□□ -0.16
CD48-202ENST00000368046 CENPJQ9HC77 1338 aaPredicted RBP14.05□□□□□ -0.16
CD48-202ENST00000368046 EIF3AQ14152 1382 aaKnown RBP14.05□□□□□ -0.16
CD48-202ENST00000368046 NHSL1Q5SYE7 1610 aa14.04□□□□□ -0.16
CD48-202ENST00000368046 NUDT16Q96DE0 195 aaKnown RBP14.04□□□□□ -0.16
CD48-202ENST00000368046 ROCK2O75116 1388 aaKnown RBP14.04□□□□□ -0.16
CD48-202ENST00000368046 ANKARQ7Z5J8 1434 aa14.04□□□□□ -0.16
CD48-202ENST00000368046 MEX3CQ5U5Q3 659 aaKnown RBP14.03□□□□□ -0.16
CD48-202ENST00000368046 PRR36Q9H6K5 1346 aa14.03□□□□□ -0.16
CD48-202ENST00000368046 PNPLA6Q8IY17 1366 aa14.03□□□□□ -0.16
CD48-202ENST00000368046 FMN2Q9NZ56 1722 aa14.02□□□□□ -0.16
CD48-202ENST00000368046 CARD11Q9BXL7 1154 aa14.02□□□□□ -0.17
CD48-202ENST00000368046 CCDC61Q9Y6R9 512 aa14.02□□□□□ -0.17
CD48-202ENST00000368046 SPATA31A3Q5VYP0 1347 aa14.01□□□□□ -0.17
CD48-202ENST00000368046 NGDNQ8NEJ9 315 aaKnown RBP14.01□□□□□ -0.17
CD48-202ENST00000368046 ADGRB2O60241 1585 aa14□□□□□ -0.17
CD48-202ENST00000368046 PXDNQ92626 1479 aa14□□□□□ -0.17
CD48-202ENST00000368046 GPRASP1Q5JY77 1395 aa14□□□□□ -0.17
CD48-202ENST00000368046 SHPRHQ149N8 1683 aa13.99□□□□□ -0.17
CD48-202ENST00000368046 SRPK2P78362 688 aaKnown RBP13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms