RNA–Protein interactions for RNA: ENST00000367311.4

PHLDA3-202, Transcript of pleckstrin homology like domain family A member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHLDA3, Length 2,640 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHLDA3-202ENST00000367311 VIRMAQ69YN4 1812 aaKnown RBP25.53■■□□□ 1.68
PHLDA3-202ENST00000367311 NUTM2DQ5VT03 806 aaPredicted RBP25.53■■□□□ 1.68
PHLDA3-202ENST00000367311 TSR2Q969E8 191 aaKnown RBP25.53■■□□□ 1.68
PHLDA3-202ENST00000367311 RUNDC1Q96C34 613 aa25.53■■□□□ 1.68
PHLDA3-202ENST00000367311 TBC1D32Q96NH3 1257 aa25.53■■□□□ 1.68
PHLDA3-202ENST00000367311 ABCC1P33527 1531 aa25.53■■□□□ 1.68
PHLDA3-202ENST00000367311 PNNQ9H307 717 aaKnown RBP25.51■■□□□ 1.67
PHLDA3-202ENST00000367311 XRCC6P12956 609 aaKnown RBP eCLIP25.5■■□□□ 1.67
PHLDA3-202ENST00000367311 POLR3AO14802 1390 aaPredicted RBP25.5■■□□□ 1.67
PHLDA3-202ENST00000367311 MFAP1P55081 439 aaKnown RBP25.5■■□□□ 1.67
PHLDA3-202ENST00000367311 PMFBP1Q8TBY8 1022 aa25.5■■□□□ 1.67
PHLDA3-202ENST00000367311 CHD1O14646 1710 aa25.5■■□□□ 1.67
PHLDA3-202ENST00000367311 ZMYND15Q9H091 742 aa25.5■■□□□ 1.67
PHLDA3-202ENST00000367311 ABCA6Q8N139 1617 aa25.49■■□□□ 1.67
PHLDA3-202ENST00000367311 UPF2Q9HAU5 1272 aaKnown RBP25.49■■□□□ 1.67
PHLDA3-202ENST00000367311 PANK2Q9BZ23 570 aa25.47■■□□□ 1.67
PHLDA3-202ENST00000367311 HSP90AA2PQ14568 343 aaPredicted RBP25.47■■□□□ 1.67
PHLDA3-202ENST00000367311 GOLGA6L3A6NEY3 463 aa25.46■■□□□ 1.67
PHLDA3-202ENST00000367311 U2AF1L5P0DN76 240 aaPredicted RBP25.46■■□□□ 1.67
PHLDA3-202ENST00000367311 U2AF1Q01081 240 aaKnown RBP eCLIP25.46■■□□□ 1.67
PHLDA3-202ENST00000367311 SAFB2Q14151 953 aaKnown RBP eCLIP25.46■■□□□ 1.67
PHLDA3-202ENST00000367311 CLCN1P35523 988 aa25.45■■□□□ 1.66
PHLDA3-202ENST00000367311 ZFYVE16Q7Z3T8 1539 aa25.45■■□□□ 1.66
PHLDA3-202ENST00000367311 SHPRHQ149N8 1683 aa25.44■■□□□ 1.66
PHLDA3-202ENST00000367311 HSP90AA1P07900 732 aaKnown RBP25.44■■□□□ 1.66
PHLDA3-202ENST00000367311 RWDD1Q9H446 243 aaPredicted RBP25.43■■□□□ 1.66
PHLDA3-202ENST00000367311 KANK1Q14678 1352 aa25.43■■□□□ 1.66
PHLDA3-202ENST00000367311 FTSJ3Q8IY81 847 aaKnown RBP25.43■■□□□ 1.66
PHLDA3-202ENST00000367311 NOS1P29475 1434 aa25.42■■□□□ 1.66
PHLDA3-202ENST00000367311 ZCCHC11Q5TAX3 1644 aaKnown RBP25.42■■□□□ 1.66
PHLDA3-202ENST00000367311 NINLQ9Y2I6 1382 aa25.42■■□□□ 1.66
PHLDA3-202ENST00000367311 MVPQ14764 893 aaKnown RBP25.41■■□□□ 1.66
PHLDA3-202ENST00000367311 MAP3K4Q9Y6R4 1608 aa25.41■■□□□ 1.66
PHLDA3-202ENST00000367311 PHF23Q9BUL5 403 aaPredicted RBP25.41■■□□□ 1.66
PHLDA3-202ENST00000367311 FSD2A1L4K1 749 aa25.4■■□□□ 1.66
PHLDA3-202ENST00000367311 RRP9O43818 475 aaKnown RBP25.39■■□□□ 1.66
PHLDA3-202ENST00000367311 IQSEC2Q5JU85 1478 aa25.39■■□□□ 1.66
PHLDA3-202ENST00000367311 STAC3Q96MF2 364 aa25.39■■□□□ 1.65
PHLDA3-202ENST00000367311 EXOSC9Q06265 439 aaKnown RBP25.38■■□□□ 1.65
PHLDA3-202ENST00000367311 WDR63Q8IWG1 891 aa25.38■■□□□ 1.65
PHLDA3-202ENST00000367311 C22orf23Q9BZE7 217 aa25.38■■□□□ 1.65
PHLDA3-202ENST00000367311 CFAP65Q6ZU64 1925 aaKnown RBP25.38■■□□□ 1.65
PHLDA3-202ENST00000367311 U2SURPO15042 1029 aaKnown RBP25.38■■□□□ 1.65
PHLDA3-202ENST00000367311 ITPRIPQ8IWB1 547 aa25.38■■□□□ 1.65
PHLDA3-202ENST00000367311 DZIP1LQ8IYY4 767 aaKnown RBP25.38■■□□□ 1.65
PHLDA3-202ENST00000367311 NGEFQ8N5V2 710 aa25.38■■□□□ 1.65
PHLDA3-202ENST00000367311 SMC4Q9NTJ3 1288 aa25.38■■□□□ 1.65
PHLDA3-202ENST00000367311 TET3O43151 1660 aa25.37■■□□□ 1.65
PHLDA3-202ENST00000367311 MCM4P33991 863 aa25.36■■□□□ 1.65
PHLDA3-202ENST00000367311 MROH2AA6NES4 1674 aa25.36■■□□□ 1.65
PHLDA3-202ENST00000367311 ZKSCAN2Q63HK3 967 aa25.36■■□□□ 1.65
PHLDA3-202ENST00000367311 TRIM27P14373 513 aa25.35■■□□□ 1.65
PHLDA3-202ENST00000367311 CABP2Q9NPB3 220 aa25.35■■□□□ 1.65
PHLDA3-202ENST00000367311 SSH1Q8WYL5 1049 aa25.34■■□□□ 1.65
PHLDA3-202ENST00000367311 MYH16Q9H6N6 1097 aa25.33■■□□□ 1.65
PHLDA3-202ENST00000367311 SHROOM2Q13796 1616 aa25.33■■□□□ 1.65
PHLDA3-202ENST00000367311 CFAP53Q96M91 514 aa25.33■■□□□ 1.64
PHLDA3-202ENST00000367311 RTEL1-TNFRSF6BF6WH68 1400 aa25.31■■□□□ 1.64
PHLDA3-202ENST00000367311 ZNF518AQ6AHZ1 1483 aa25.31■■□□□ 1.64
PHLDA3-202ENST00000367311 NOB1Q9ULX3 412 aaKnown RBP25.31■■□□□ 1.64
PHLDA3-202ENST00000367311 DEPDC5O75140 1603 aa25.31■■□□□ 1.64
PHLDA3-202ENST00000367311 ATP7AQ04656 1500 aa25.31■■□□□ 1.64
PHLDA3-202ENST00000367311 KIAA1210Q9ULL0 1709 aa25.31■■□□□ 1.64
PHLDA3-202ENST00000367311 GGNBP2Q9H3C7 697 aa25.3■■□□□ 1.64
PHLDA3-202ENST00000367311 FOXD4L1Q9NU39 408 aa25.3■■□□□ 1.64
PHLDA3-202ENST00000367311 MYOM2P54296 1465 aa25.3■■□□□ 1.64
PHLDA3-202ENST00000367311 GGT6Q6P531 493 aa25.3■■□□□ 1.64
PHLDA3-202ENST00000367311 TRAK2O60296 914 aa25.29■■□□□ 1.64
PHLDA3-202ENST00000367311 TMEM57Q8N5G2 664 aa25.29■■□□□ 1.64
PHLDA3-202ENST00000367311 LNPKQ9C0E8 428 aa25.27■■□□□ 1.64
PHLDA3-202ENST00000367311 FANCAO15360 1455 aa25.27■■□□□ 1.64
PHLDA3-202ENST00000367311 MRE11P49959 708 aa25.26■■□□□ 1.63
PHLDA3-202ENST00000367311 STK26Q9P289 416 aa25.26■■□□□ 1.63
PHLDA3-202ENST00000367311 TRIM35Q9UPQ4 493 aa25.26■■□□□ 1.63
PHLDA3-202ENST00000367311 MROH1Q8NDA8 1641 aa25.26■■□□□ 1.63
PHLDA3-202ENST00000367311 CCDC27Q2M243 656 aa25.25■■□□□ 1.63
PHLDA3-202ENST00000367311 C14orf93Q9H972 538 aaKnown RBP25.25■■□□□ 1.63
PHLDA3-202ENST00000367311 VWDEQ8N2E2 1590 aa25.25■■□□□ 1.63
PHLDA3-202ENST00000367311 KIF1BO60333 1816 aa25.25■■□□□ 1.63
PHLDA3-202ENST00000367311 SLC24A1O60721 1099 aa25.25■■□□□ 1.63
PHLDA3-202ENST00000367311 FBLN1P23142 703 aa25.24■■□□□ 1.63
PHLDA3-202ENST00000367311 CHMP5Q9NZZ3 219 aa25.24■■□□□ 1.63
PHLDA3-202ENST00000367311 CD109Q6YHK3 1445 aa25.24■■□□□ 1.63
PHLDA3-202ENST00000367311 TMPOP42166 694 aaKnown RBP25.23■■□□□ 1.63
PHLDA3-202ENST00000367311 ATF7IPQ6VMQ6 1270 aa25.22■■□□□ 1.63
PHLDA3-202ENST00000367311 QRICH2Q9H0J4 1663 aa25.22■■□□□ 1.63
PHLDA3-202ENST00000367311 ESPNB1AK53 854 aa25.22■■□□□ 1.63
PHLDA3-202ENST00000367311 C1orf115Q9H7X2 142 aa25.22■■□□□ 1.63
PHLDA3-202ENST00000367311 SBNO2Q9Y2G9 1366 aa25.22■■□□□ 1.63
PHLDA3-202ENST00000367311 ERBB4Q15303 1308 aa25.21■■□□□ 1.63
PHLDA3-202ENST00000367311 HSCBQ8IWL3 235 aa25.21■■□□□ 1.63
PHLDA3-202ENST00000367311 ZNF692Q9BU19 519 aaPredicted RBP25.21■■□□□ 1.63
PHLDA3-202ENST00000367311 ADGRL1O94910 1474 aa25.21■■□□□ 1.63
PHLDA3-202ENST00000367311 PPRC1Q5VV67 1664 aaKnown RBP25.21■■□□□ 1.63
PHLDA3-202ENST00000367311 GRPEL1Q9HAV7 217 aa25.2■■□□□ 1.63
PHLDA3-202ENST00000367311 AAMPQ13685 434 aa25.2■■□□□ 1.62
PHLDA3-202ENST00000367311 PLEKHF1Q96S99 279 aa25.2■■□□□ 1.62
PHLDA3-202ENST00000367311 IFT172Q9UG01 1749 aa25.19■■□□□ 1.62
PHLDA3-202ENST00000367311 NRXN1Q9ULB1 1477 aa25.19■■□□□ 1.62
PHLDA3-202ENST00000367311 INO80Q9ULG1 1556 aaPredicted RBP25.18■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms