RNA–Protein interactions for RNA: ENST00000367186.7

SCAF8-202, Transcript of SR-related CTD associated factor 8, humanhuman

TSL 2 BASIC

Gene SCAF8, Length 4,908 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-202ENST00000367186 TOP2BQ02880 1626 aa12.69□□□□□ -0.38
SCAF8-202ENST00000367186 API5Q9BZZ5 524 aaKnown RBP12.69□□□□□ -0.38
SCAF8-202ENST00000367186 TRAK2O60296 914 aa12.69□□□□□ -0.38
SCAF8-202ENST00000367186 EVA1CP58658 441 aa12.69□□□□□ -0.38
SCAF8-202ENST00000367186 NUCB2P80303 420 aa12.69□□□□□ -0.38
SCAF8-202ENST00000367186 ANKRD20A12PQ8NF67 263 aa12.69□□□□□ -0.38
SCAF8-202ENST00000367186 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.68□□□□□ -0.38
SCAF8-202ENST00000367186 WASHC4Q2M389 1173 aa12.68□□□□□ -0.38
SCAF8-202ENST00000367186 KIF21AQ7Z4S6 1674 aa12.68□□□□□ -0.38
SCAF8-202ENST00000367186 NEK4P51957 841 aa12.67□□□□□ -0.38
SCAF8-202ENST00000367186 CEBPZQ03701 1054 aaKnown RBP12.67□□□□□ -0.38
SCAF8-202ENST00000367186 RNF20Q5VTR2 975 aa12.67□□□□□ -0.38
SCAF8-202ENST00000367186 TEX35Q5T0J7 233 aa12.67□□□□□ -0.38
SCAF8-202ENST00000367186 TCEAL9Q9UHQ7 104 aa12.67□□□□□ -0.38
SCAF8-202ENST00000367186 PRPF40AO75400 957 aaKnown RBP12.67□□□□□ -0.38
SCAF8-202ENST00000367186 INTS3Q68E01 1043 aaKnown RBP12.67□□□□□ -0.38
SCAF8-202ENST00000367186 ADAMTS8Q9UP79 889 aa12.67□□□□□ -0.38
SCAF8-202ENST00000367186 TRIM5Q9C035 493 aa12.67□□□□□ -0.38
SCAF8-202ENST00000367186 C1orf115Q9H7X2 142 aa12.67□□□□□ -0.38
SCAF8-202ENST00000367186 FIBPO43427 364 aa12.66□□□□□ -0.38
SCAF8-202ENST00000367186 TSPYL4Q9UJ04 414 aa12.66□□□□□ -0.38
SCAF8-202ENST00000367186 EVC2Q86UK5 1308 aa12.66□□□□□ -0.38
SCAF8-202ENST00000367186 CCDC144AA2RUR9 1427 aa12.66□□□□□ -0.38
SCAF8-202ENST00000367186 FAM177BA6PVY3 158 aa12.65□□□□□ -0.38
SCAF8-202ENST00000367186 SPC24Q8NBT2 197 aa12.65□□□□□ -0.38
SCAF8-202ENST00000367186 OFD1O75665 1012 aa12.65□□□□□ -0.38
SCAF8-202ENST00000367186 HSP90B2PQ58FF3 399 aa12.65□□□□□ -0.38
SCAF8-202ENST00000367186 RALYLQ86SE5 291 aaKnown RBP12.65□□□□□ -0.38
SCAF8-202ENST00000367186 BIVM-ERCC5R4GMW8 1640 aa12.65□□□□□ -0.38
SCAF8-202ENST00000367186 MRE11P49959 708 aa12.65□□□□□ -0.38
SCAF8-202ENST00000367186 BRPF1P55201 1214 aaPredicted RBP12.65□□□□□ -0.38
SCAF8-202ENST00000367186 DHX37Q8IY37 1157 aaKnown RBP12.65□□□□□ -0.38
SCAF8-202ENST00000367186 ZFYVE27Q5T4F4 411 aa12.64□□□□□ -0.39
SCAF8-202ENST00000367186 RUFY1Q96T51 708 aa12.64□□□□□ -0.39
SCAF8-202ENST00000367186 TMEM132EQ6IEE7 984 aa12.64□□□□□ -0.39
SCAF8-202ENST00000367186 VGFO15240 615 aaPredicted RBP12.64□□□□□ -0.39
SCAF8-202ENST00000367186 SURF6O75683 361 aaKnown RBP12.63□□□□□ -0.39
SCAF8-202ENST00000367186 CCDC47Q96A33 483 aaKnown RBP12.63□□□□□ -0.39
SCAF8-202ENST00000367186 MAPK8IP2Q13387 824 aaPredicted RBP12.63□□□□□ -0.39
SCAF8-202ENST00000367186 LRRFIP1Q32MZ4 808 aaKnown RBP12.63□□□□□ -0.39
SCAF8-202ENST00000367186 URB2Q14146 1524 aaKnown RBP12.63□□□□□ -0.39
SCAF8-202ENST00000367186 CARMIL2Q6F5E8 1435 aa12.63□□□□□ -0.39
SCAF8-202ENST00000367186 CT47A1Q5JQC4 288 aaPredicted RBP12.63□□□□□ -0.39
SCAF8-202ENST00000367186 CHMP4CQ96CF2 233 aa12.63□□□□□ -0.39
SCAF8-202ENST00000367186 SAFBQ15424 915 aaKnown RBP eCLIP12.63□□□□□ -0.39
SCAF8-202ENST00000367186 KIF7Q2M1P5 1343 aa12.63□□□□□ -0.39
SCAF8-202ENST00000367186 FGD5Q6ZNL6 1462 aa12.62□□□□□ -0.39
SCAF8-202ENST00000367186 RUNDC1Q96C34 613 aa12.62□□□□□ -0.39
SCAF8-202ENST00000367186 RRP12Q5JTH9 1297 aaKnown RBP12.62□□□□□ -0.39
SCAF8-202ENST00000367186 NOL10Q9BSC4 688 aaKnown RBP12.62□□□□□ -0.39
SCAF8-202ENST00000367186 TOPBP1Q92547 1522 aa12.62□□□□□ -0.39
SCAF8-202ENST00000367186 MTHFSP49914 203 aa12.62□□□□□ -0.39
SCAF8-202ENST00000367186 RIC3Q7Z5B4 369 aa12.62□□□□□ -0.39
SCAF8-202ENST00000367186 JPH4Q96JJ6 628 aa12.62□□□□□ -0.39
SCAF8-202ENST00000367186 TRIM34Q9BYJ4 488 aa12.62□□□□□ -0.39
SCAF8-202ENST00000367186 C11orf95C9JLR9 678 aaPredicted RBP12.62□□□□□ -0.39
SCAF8-202ENST00000367186 TCP11L2Q8N4U5 519 aa12.62□□□□□ -0.39
SCAF8-202ENST00000367186 ARGLU1Q9NWB6 273 aaPredicted RBP12.61□□□□□ -0.39
SCAF8-202ENST00000367186 ERICH2A1L162 156 aa12.61□□□□□ -0.39
SCAF8-202ENST00000367186 H0YHG0 523 aa12.61□□□□□ -0.39
SCAF8-202ENST00000367186 DDX58O95786 925 aaKnown RBP12.61□□□□□ -0.39
SCAF8-202ENST00000367186 CCDC43Q96MW1 224 aaKnown RBP12.61□□□□□ -0.39
SCAF8-202ENST00000367186 CTDP1Q9Y5B0 961 aaPredicted RBP12.61□□□□□ -0.39
SCAF8-202ENST00000367186 HOOK1Q9UJC3 728 aaKnown RBP12.61□□□□□ -0.39
SCAF8-202ENST00000367186 UBTFL1P0CB47 393 aaPredicted RBP12.6□□□□□ -0.39
SCAF8-202ENST00000367186 PSME1Q06323 249 aa12.6□□□□□ -0.39
SCAF8-202ENST00000367186 AMOTL1Q8IY63 956 aa12.6□□□□□ -0.39
SCAF8-202ENST00000367186 FSD1Q9BTV5 496 aa12.6□□□□□ -0.39
SCAF8-202ENST00000367186 PDZRN3Q9UPQ7 1066 aa12.6□□□□□ -0.39
SCAF8-202ENST00000367186 SMC2O95347 1197 aa12.6□□□□□ -0.39
SCAF8-202ENST00000367186 CABP2Q9NPB3 220 aa12.6□□□□□ -0.39
SCAF8-202ENST00000367186 CDC45O75419 566 aa12.6□□□□□ -0.39
SCAF8-202ENST00000367186 FAM177A1Q8N128 213 aaPredicted RBP12.6□□□□□ -0.39
SCAF8-202ENST00000367186 BCAR3O75815 825 aa12.59□□□□□ -0.39
SCAF8-202ENST00000367186 ZNF644Q9H582 1327 aaPredicted RBP12.59□□□□□ -0.39
SCAF8-202ENST00000367186 TSR2Q969E8 191 aaKnown RBP12.59□□□□□ -0.39
SCAF8-202ENST00000367186 NLRP2Q9NX02 1062 aa12.59□□□□□ -0.39
SCAF8-202ENST00000367186 RAD54L2Q9Y4B4 1467 aa12.59□□□□□ -0.39
SCAF8-202ENST00000367186 GNAI1P63096 354 aa12.59□□□□□ -0.39
SCAF8-202ENST00000367186 ERC2O15083 957 aa12.59□□□□□ -0.39
SCAF8-202ENST00000367186 DNMBPQ6XZF7 1577 aa12.59□□□□□ -0.39
SCAF8-202ENST00000367186 DNAJC2Q99543 621 aaKnown RBP12.59□□□□□ -0.39
SCAF8-202ENST00000367186 CAGE1Q8TC20 777 aa12.58□□□□□ -0.39
SCAF8-202ENST00000367186 CNKSR2Q8WXI2 1034 aa12.58□□□□□ -0.39
SCAF8-202ENST00000367186 EXOSC9Q06265 439 aaKnown RBP12.58□□□□□ -0.4
SCAF8-202ENST00000367186 CLASRPQ8N2M8 674 aaKnown RBP12.58□□□□□ -0.4
SCAF8-202ENST00000367186 STK3Q13188 491 aa12.58□□□□□ -0.4
SCAF8-202ENST00000367186 KLHL34Q8N239 644 aa12.57□□□□□ -0.4
SCAF8-202ENST00000367186 KINO60870 393 aaKnown RBP12.57□□□□□ -0.4
SCAF8-202ENST00000367186 RSPH4AQ5TD94 716 aa12.57□□□□□ -0.4
SCAF8-202ENST00000367186 ODF2Q5BJF6 829 aa12.57□□□□□ -0.4
SCAF8-202ENST00000367186 POLA1P09884 1462 aaPredicted RBP12.57□□□□□ -0.4
SCAF8-202ENST00000367186 PLCD4Q9BRC7 762 aa12.56□□□□□ -0.4
SCAF8-202ENST00000367186 OLFM4Q6UX06 510 aa12.56□□□□□ -0.4
SCAF8-202ENST00000367186 SKAP1Q86WV1 359 aa12.56□□□□□ -0.4
SCAF8-202ENST00000367186 CCDC39Q9UFE4 941 aa12.56□□□□□ -0.4
SCAF8-202ENST00000367186 AXDND1Q5T1B0 1012 aaPredicted RBP12.56□□□□□ -0.4
SCAF8-202ENST00000367186 RAPGEF4Q8WZA2 1011 aa12.56□□□□□ -0.4
SCAF8-202ENST00000367186 AK7Q96M32 723 aa12.56□□□□□ -0.4
SCAF8-202ENST00000367186 TSPYL1Q9H0U9 437 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms