RNA–Protein interactions for RNA: ENST00000366898.5

PRKN-206, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKN, Length 4,180 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-206ENST00000366898 GOLGA6L4A6NEF3 574 aa14.48□□□□□ -0.09
PRKN-206ENST00000366898 SMG6Q86US8 1419 aaKnown RBP14.47□□□□□ -0.09
PRKN-206ENST00000366898 ERBINQ96RT1 1412 aa14.47□□□□□ -0.09
PRKN-206ENST00000366898 DHX29Q7Z478 1369 aaKnown RBP14.47□□□□□ -0.09
PRKN-206ENST00000366898 ZSCAN30Q86W11 494 aa14.47□□□□□ -0.09
PRKN-206ENST00000366898 NUP160Q12769 1436 aa14.47□□□□□ -0.09
PRKN-206ENST00000366898 EIF3AQ14152 1382 aaKnown RBP14.47□□□□□ -0.09
PRKN-206ENST00000366898 NRDCO43847 1150 aa14.47□□□□□ -0.09
PRKN-206ENST00000366898 SYCP2Q9BX26 1530 aa14.46□□□□□ -0.09
PRKN-206ENST00000366898 GOLGA6L1Q8N7Z2 621 aa14.46□□□□□ -0.09
PRKN-206ENST00000366898 MCM4P33991 863 aa14.46□□□□□ -0.1
PRKN-206ENST00000366898 SYAP1Q96A49 352 aaPredicted RBP14.46□□□□□ -0.1
PRKN-206ENST00000366898 SLC12A5Q9H2X9 1139 aa14.46□□□□□ -0.1
PRKN-206ENST00000366898 GCC2Q8IWJ2 1684 aa14.45□□□□□ -0.1
PRKN-206ENST00000366898 SPDYE4A6NLX3 237 aa14.45□□□□□ -0.1
PRKN-206ENST00000366898 RAPGEF3O95398 923 aa14.45□□□□□ -0.1
PRKN-206ENST00000366898 XRCC6P12956 609 aaKnown RBP eCLIP14.45□□□□□ -0.1
PRKN-206ENST00000366898 CCDC173Q0VFZ6 552 aa14.45□□□□□ -0.1
PRKN-206ENST00000366898 HAP1P54257 671 aaPredicted RBP14.45□□□□□ -0.1
PRKN-206ENST00000366898 MAPK8IP3Q9UPT6 1336 aa14.45□□□□□ -0.1
PRKN-206ENST00000366898 C20orf194Q5TEA3 1177 aa14.44□□□□□ -0.1
PRKN-206ENST00000366898 MINK1Q8N4C8 1332 aaPredicted RBP14.44□□□□□ -0.1
PRKN-206ENST00000366898 CASC1Q6TDU7 716 aa14.44□□□□□ -0.1
PRKN-206ENST00000366898 NOL8Q76FK4 1167 aaKnown RBP14.43□□□□□ -0.1
PRKN-206ENST00000366898 RWDD1Q9H446 243 aaPredicted RBP14.43□□□□□ -0.1
PRKN-206ENST00000366898 COG6Q9Y2V7 657 aa14.43□□□□□ -0.1
PRKN-206ENST00000366898 CHD1O14646 1710 aa14.43□□□□□ -0.1
PRKN-206ENST00000366898 IRX3P78415 501 aaPredicted RBP14.43□□□□□ -0.1
PRKN-206ENST00000366898 ITSN2Q9NZM3 1697 aa14.43□□□□□ -0.1
PRKN-206ENST00000366898 SPATA31E1Q6ZUB1 1445 aa14.42□□□□□ -0.1
PRKN-206ENST00000366898 NPHP1O15259 732 aa14.42□□□□□ -0.1
PRKN-206ENST00000366898 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.42□□□□□ -0.1
PRKN-206ENST00000366898 RBM25P49756 843 aaKnown RBP14.42□□□□□ -0.1
PRKN-206ENST00000366898 CAVIN1Q6NZI2 390 aaKnown RBP14.42□□□□□ -0.1
PRKN-206ENST00000366898 CABP2Q9NPB3 220 aa14.42□□□□□ -0.1
PRKN-206ENST00000366898 NUTM2FA1L443 756 aa14.42□□□□□ -0.1
PRKN-206ENST00000366898 ADGRF5Q8IZF2 1346 aa14.42□□□□□ -0.1
PRKN-206ENST00000366898 CENPJQ9HC77 1338 aaPredicted RBP14.42□□□□□ -0.1
PRKN-206ENST00000366898 TAF3Q5VWG9 929 aa14.41□□□□□ -0.1
PRKN-206ENST00000366898 MCTP1Q6DN14 999 aa14.41□□□□□ -0.1
PRKN-206ENST00000366898 HTATSF1O43719 755 aaKnown RBP14.41□□□□□ -0.1
PRKN-206ENST00000366898 HMGN5P82970 282 aaKnown RBP14.41□□□□□ -0.1
PRKN-206ENST00000366898 FAM135AQ9P2D6 1515 aa14.4□□□□□ -0.1
PRKN-206ENST00000366898 RALGAPBQ86X10 1494 aa14.4□□□□□ -0.1
PRKN-206ENST00000366898 PDCL2Q8N4E4 241 aa14.4□□□□□ -0.1
PRKN-206ENST00000366898 TESK2Q96S53 571 aa14.4□□□□□ -0.1
PRKN-206ENST00000366898 DIAPH3Q9NSV4 1193 aa14.4□□□□□ -0.1
PRKN-206ENST00000366898 BCAR3O75815 825 aa14.4□□□□□ -0.1
PRKN-206ENST00000366898 ZNF526Q8TF50 670 aaPredicted RBP14.4□□□□□ -0.1
PRKN-206ENST00000366898 TRAPPC8Q9Y2L5 1435 aa14.4□□□□□ -0.1
PRKN-206ENST00000366898 TEX35Q5T0J7 233 aa14.4□□□□□ -0.1
PRKN-206ENST00000366898 CCDC39Q9UFE4 941 aa14.39□□□□□ -0.11
PRKN-206ENST00000366898 APBB1O00213 710 aa14.39□□□□□ -0.11
PRKN-206ENST00000366898 TAOK2Q9UL54 1235 aa14.39□□□□□ -0.11
PRKN-206ENST00000366898 KDM5BQ9UGL1 1544 aa14.39□□□□□ -0.11
PRKN-206ENST00000366898 PRAG1Q86YV5 1406 aa14.38□□□□□ -0.11
PRKN-206ENST00000366898 PANK1Q8TE04 598 aa14.38□□□□□ -0.11
PRKN-206ENST00000366898 GGNBP2Q9H3C7 697 aa14.38□□□□□ -0.11
PRKN-206ENST00000366898 PPP4R3BQ5MIZ7 849 aa14.37□□□□□ -0.11
PRKN-206ENST00000366898 GPATCH11Q8N954 259 aa14.37□□□□□ -0.11
PRKN-206ENST00000366898 MTHFSP49914 203 aa14.37□□□□□ -0.11
PRKN-206ENST00000366898 CCAR2Q8N163 923 aaKnown RBP14.37□□□□□ -0.11
PRKN-206ENST00000366898 GPS2Q13227 327 aa14.36□□□□□ -0.11
PRKN-206ENST00000366898 PMFBP1Q8TBY8 1022 aa14.36□□□□□ -0.11
PRKN-206ENST00000366898 PER1O15534 1290 aaPredicted RBP14.36□□□□□ -0.11
PRKN-206ENST00000366898 KIF3AQ9Y496 699 aa14.36□□□□□ -0.11
PRKN-206ENST00000366898 TNNT1P13805 278 aa14.35□□□□□ -0.11
PRKN-206ENST00000366898 C22orf23Q9BZE7 217 aa14.35□□□□□ -0.11
PRKN-206ENST00000366898 IFT57Q9NWB7 429 aa14.35□□□□□ -0.11
PRKN-206ENST00000366898 ADGRL2O95490 1459 aa14.35□□□□□ -0.11
PRKN-206ENST00000366898 ELL2O00472 640 aaPredicted RBP14.34□□□□□ -0.11
PRKN-206ENST00000366898 SKIDA1Q1XH10 827 aa14.34□□□□□ -0.11
PRKN-206ENST00000366898 SETQ01105 290 aaPredicted RBP14.34□□□□□ -0.11
PRKN-206ENST00000366898 GNL2Q13823 731 aaKnown RBP14.34□□□□□ -0.11
PRKN-206ENST00000366898 C14orf37Q86TY3 774 aa14.34□□□□□ -0.11
PRKN-206ENST00000366898 VGFO15240 615 aaPredicted RBP14.34□□□□□ -0.11
PRKN-206ENST00000366898 SMC4Q9NTJ3 1288 aa14.33□□□□□ -0.12
PRKN-206ENST00000366898 ABCC10Q5T3U5 1492 aa14.33□□□□□ -0.12
PRKN-206ENST00000366898 CGNL1Q0VF96 1302 aa14.33□□□□□ -0.12
PRKN-206ENST00000366898 TCP11L2Q8N4U5 519 aa14.33□□□□□ -0.12
PRKN-206ENST00000366898 RIMBP3CA6NJZ7 1639 aa14.32□□□□□ -0.12
PRKN-206ENST00000366898 RIMBP3BA6NNM3 1639 aa14.32□□□□□ -0.12
PRKN-206ENST00000366898 RIMBP3Q9UFD9 1639 aa14.32□□□□□ -0.12
PRKN-206ENST00000366898 ITPRIPQ8IWB1 547 aa14.32□□□□□ -0.12
PRKN-206ENST00000366898 PHF14O94880 888 aa14.32□□□□□ -0.12
PRKN-206ENST00000366898 NOM1Q5C9Z4 860 aaKnown RBP14.32□□□□□ -0.12
PRKN-206ENST00000366898 SMAP1Q8IYB5 467 aaPredicted RBP14.32□□□□□ -0.12
PRKN-206ENST00000366898 EVC2Q86UK5 1308 aa14.31□□□□□ -0.12
PRKN-206ENST00000366898 SASS6Q6UVJ0 657 aa14.31□□□□□ -0.12
PRKN-206ENST00000366898 HDGFL2Q7Z4V5 671 aaPredicted RBP14.31□□□□□ -0.12
PRKN-206ENST00000366898 MBD5Q9P267 1494 aa14.31□□□□□ -0.12
PRKN-206ENST00000366898 ISY1Q9ULR0 285 aaKnown RBP14.31□□□□□ -0.12
PRKN-206ENST00000366898 A2MP01023 1474 aa14.31□□□□□ -0.12
PRKN-206ENST00000366898 IPO4Q8TEX9 1081 aaKnown RBP14.3□□□□□ -0.12
PRKN-206ENST00000366898 PLCH2O75038 1416 aa14.3□□□□□ -0.12
PRKN-206ENST00000366898 CALRP27797 417 aaKnown RBP14.3□□□□□ -0.12
PRKN-206ENST00000366898 CERS3Q8IU89 383 aa14.29□□□□□ -0.12
PRKN-206ENST00000366898 ADGRL1O94910 1474 aa14.29□□□□□ -0.12
PRKN-206ENST00000366898 DYNC1I1O14576 645 aa14.29□□□□□ -0.12
PRKN-206ENST00000366898 CHMP3Q9Y3E7 222 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms