RNA–Protein interactions for RNA: ENST00000365563.1

RNU6-54P-201, Transcript of RNA, U6 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU6-54P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-54P-201ENST00000365563 NBR1Q14596 966 aa2.13□□□□□ -2.07
RNU6-54P-201ENST00000365563 NUDT18Q6ZVK8 323 aa2.13□□□□□ -2.07
RNU6-54P-201ENST00000365563 SCARF2Q96GP6 870 aaPredicted RBP2.13□□□□□ -2.07
RNU6-54P-201ENST00000365563 ACTN4O43707 911 aaKnown RBP2.12□□□□□ -2.07
RNU6-54P-201ENST00000365563 ECM2O94769 699 aaPredicted RBP2.11□□□□□ -2.07
RNU6-54P-201ENST00000365563 TSR1Q2NL82 804 aaKnown RBP2.11□□□□□ -2.07
RNU6-54P-201ENST00000365563 SVOPQ8N4V2 548 aa2.11□□□□□ -2.07
RNU6-54P-201ENST00000365563 DDX12PQ92771 950 aa2.11□□□□□ -2.07
RNU6-54P-201ENST00000365563 HPS1Q92902 700 aa2.11□□□□□ -2.07
RNU6-54P-201ENST00000365563 SPOCK3Q9BQ16 436 aa2.11□□□□□ -2.07
RNU6-54P-201ENST00000365563 LARP6Q9BRS8 491 aaKnown RBP2.11□□□□□ -2.07
RNU6-54P-201ENST00000365563 EMILIN3Q9NT22 766 aa2.11□□□□□ -2.07
RNU6-54P-201ENST00000365563 FCF1Q9Y324 198 aaKnown RBP2.11□□□□□ -2.07
RNU6-54P-201ENST00000365563 NCKAP5LQ9HCH0 1330 aa2.11□□□□□ -2.07
RNU6-54P-201ENST00000365563 J3QL48 77 aa2.1□□□□□ -2.07
RNU6-54P-201ENST00000365563 MFSD10Q14728 455 aa2.1□□□□□ -2.07
RNU6-54P-201ENST00000365563 SPSB2Q99619 263 aa2.1□□□□□ -2.07
RNU6-54P-201ENST00000365563 FAM198AQ9UFP1 575 aa2.1□□□□□ -2.07
RNU6-54P-201ENST00000365563 PHF20L1A8MW92 1017 aa2.09□□□□□ -2.07
RNU6-54P-201ENST00000365563 CAPN5O15484 640 aaPredicted RBP2.09□□□□□ -2.07
RNU6-54P-201ENST00000365563 CFHP08603 1231 aa2.09□□□□□ -2.07
RNU6-54P-201ENST00000365563 BMP1P13497 986 aa2.09□□□□□ -2.07
RNU6-54P-201ENST00000365563 SCARF1Q14162 830 aa2.09□□□□□ -2.07
RNU6-54P-201ENST00000365563 PLA2G4EQ3MJ16 856 aa2.09□□□□□ -2.07
RNU6-54P-201ENST00000365563 KRTAP5-2Q701N4 177 aa2.09□□□□□ -2.07
RNU6-54P-201ENST00000365563 MRGPRX2Q96LB1 330 aa2.09□□□□□ -2.07
RNU6-54P-201ENST00000365563 C3orf80F5H4A9 247 aa2.08□□□□□ -2.08
RNU6-54P-201ENST00000365563 SLURP2P0DP57 97 aa2.08□□□□□ -2.08
RNU6-54P-201ENST00000365563 MAP3K10Q02779 954 aa2.08□□□□□ -2.08
RNU6-54P-201ENST00000365563 TRIM32Q13049 653 aa2.08□□□□□ -2.08
RNU6-54P-201ENST00000365563 TRIM46Q7Z4K8 759 aa2.08□□□□□ -2.08
RNU6-54P-201ENST00000365563 DPYSL4O14531 572 aa2.07□□□□□ -2.08
RNU6-54P-201ENST00000365563 ALDH1A1P00352 501 aa2.07□□□□□ -2.08
RNU6-54P-201ENST00000365563 PROCP04070 461 aa2.07□□□□□ -2.08
RNU6-54P-201ENST00000365563 DNAJB2P25686 324 aa2.07□□□□□ -2.08
RNU6-54P-201ENST00000365563 ZNF385CQ66K41 422 aaPredicted RBP2.07□□□□□ -2.08
RNU6-54P-201ENST00000365563 PODNQ7Z5L7 613 aa2.07□□□□□ -2.08
RNU6-54P-201ENST00000365563 HS6ST3Q8IZP7 471 aa2.07□□□□□ -2.08
RNU6-54P-201ENST00000365563 WASF2Q9Y6W5 498 aa2.07□□□□□ -2.08
RNU6-54P-201ENST00000365563 RSPH4AQ5TD94 716 aa2.06□□□□□ -2.08
RNU6-54P-201ENST00000365563 SCUBE3Q8IX30 993 aa2.06□□□□□ -2.08
RNU6-54P-201ENST00000365563 ZFP42Q96MM3 310 aa2.06□□□□□ -2.08
RNU6-54P-201ENST00000365563 CNTNAP3BQ96NU0 1288 aa2.06□□□□□ -2.08
RNU6-54P-201ENST00000365563 CNTNAP3Q9BZ76 1288 aa2.06□□□□□ -2.08
RNU6-54P-201ENST00000365563 ENAMQ9NRM1 1142 aa2.06□□□□□ -2.08
RNU6-54P-201ENST00000365563 SPDYE16A6NNV3 312 aaPredicted RBP2.05□□□□□ -2.08
RNU6-54P-201ENST00000365563 RGL2O15211 777 aa2.05□□□□□ -2.08
RNU6-54P-201ENST00000365563 MAN1A2O60476 641 aa2.05□□□□□ -2.08
RNU6-54P-201ENST00000365563 PPFIA3O75145 1194 aa2.05□□□□□ -2.08
RNU6-54P-201ENST00000365563 FMNL1O95466 1100 aaPredicted RBP2.05□□□□□ -2.08
RNU6-54P-201ENST00000365563 BAG6P46379 1132 aa2.05□□□□□ -2.08
RNU6-54P-201ENST00000365563 WNT7BP56706 349 aa2.05□□□□□ -2.08
RNU6-54P-201ENST00000365563 DCAF5Q96JK2 942 aa2.05□□□□□ -2.08
RNU6-54P-201ENST00000365563 SCO2A0A1W2PP80 73 aa2.04□□□□□ -2.08
RNU6-54P-201ENST00000365563 ARHGEF15O94989 841 aa2.04□□□□□ -2.08
RNU6-54P-201ENST00000365563 CAMK2BQ13554 666 aa2.04□□□□□ -2.08
RNU6-54P-201ENST00000365563 PDIA6Q15084 440 aa2.04□□□□□ -2.08
RNU6-54P-201ENST00000365563 RC3H1Q5TC82 1133 aaKnown RBP2.04□□□□□ -2.08
RNU6-54P-201ENST00000365563 MRPL14Q6P1L8 145 aaKnown RBP2.04□□□□□ -2.08
RNU6-54P-201ENST00000365563 PADI6Q6TGC4 694 aa2.04□□□□□ -2.08
RNU6-54P-201ENST00000365563 TTC13Q8NBP0 860 aa2.04□□□□□ -2.08
RNU6-54P-201ENST00000365563 EYA1Q99502 592 aa2.04□□□□□ -2.08
RNU6-54P-201ENST00000365563 TMEM134Q9H6X4 195 aa2.04□□□□□ -2.08
RNU6-54P-201ENST00000365563 KRT76Q01546 638 aa2.03□□□□□ -2.08
RNU6-54P-201ENST00000365563 MSS51Q4VC12 460 aa2.03□□□□□ -2.08
RNU6-54P-201ENST00000365563 ZMYM1Q5SVZ6 1142 aa2.03□□□□□ -2.08
RNU6-54P-201ENST00000365563 ALYREFQ86V81 257 aaKnown RBP2.03□□□□□ -2.08
RNU6-54P-201ENST00000365563 BEND7Q8N7W2 519 aaPredicted RBP2.03□□□□□ -2.08
RNU6-54P-201ENST00000365563 RBM46Q8TBY0 533 aaKnown RBP2.03□□□□□ -2.08
RNU6-54P-201ENST00000365563 PURBQ96QR8 312 aaKnown RBP2.03□□□□□ -2.08
RNU6-54P-201ENST00000365563 COL25A1Q9BXS0 654 aaPredicted RBP2.03□□□□□ -2.08
RNU6-54P-201ENST00000365563 UPP2O95045 317 aa2.02□□□□□ -2.09
RNU6-54P-201ENST00000365563 FURINP09958 794 aa2.02□□□□□ -2.09
RNU6-54P-201ENST00000365563 NBPF11Q86T75 865 aa2.02□□□□□ -2.09
RNU6-54P-201ENST00000365563 EHBP1Q8NDI1 1231 aa2.02□□□□□ -2.09
RNU6-54P-201ENST00000365563 CDHR5Q9HBB8 845 aa2.02□□□□□ -2.09
RNU6-54P-201ENST00000365563 SALL2Q9Y467 1007 aaPredicted RBP2.02□□□□□ -2.09
RNU6-54P-201ENST00000365563 SOBPA7XYQ1 873 aa2.01□□□□□ -2.09
RNU6-54P-201ENST00000365563 PUS10Q3MIT2 529 aaKnown RBP2.01□□□□□ -2.09
RNU6-54P-201ENST00000365563 DNAJC5Q9H3Z4 198 aa2.01□□□□□ -2.09
RNU6-54P-201ENST00000365563 PRDM9Q9NQV7 894 aa2.01□□□□□ -2.09
RNU6-54P-201ENST00000365563 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP2□□□□□ -2.09
RNU6-54P-201ENST00000365563 PLEKHG3A1L390 1219 aa2□□□□□ -2.09
RNU6-54P-201ENST00000365563 GRXCR2A6NFK2 248 aa2□□□□□ -2.09
RNU6-54P-201ENST00000365563 ADH1CP00326 375 aa2□□□□□ -2.09
RNU6-54P-201ENST00000365563 ITGB2P05107 769 aa2□□□□□ -2.09
RNU6-54P-201ENST00000365563 FECHP22830 423 aa2□□□□□ -2.09
RNU6-54P-201ENST00000365563 FAM160A2Q8N612 972 aaPredicted RBP2□□□□□ -2.09
RNU6-54P-201ENST00000365563 WHAMMQ8TF30 809 aa2□□□□□ -2.09
RNU6-54P-201ENST00000365563 NANOS1Q8WY41 292 aaKnown RBP2□□□□□ -2.09
RNU6-54P-201ENST00000365563 THAP11Q96EK4 314 aa2□□□□□ -2.09
RNU6-54P-201ENST00000365563 SLC10A3P09131 477 aa1.99□□□□□ -2.09
RNU6-54P-201ENST00000365563 CHGAP10645 457 aaKnown RBP1.99□□□□□ -2.09
RNU6-54P-201ENST00000365563 ATP6V1AP38606 617 aa1.99□□□□□ -2.09
RNU6-54P-201ENST00000365563 TXKP42681 527 aa1.99□□□□□ -2.09
RNU6-54P-201ENST00000365563 ZNF800Q2TB10 664 aaPredicted RBP eCLIP1.99□□□□□ -2.09
RNU6-54P-201ENST00000365563 Q3C1V9 767 aa1.99□□□□□ -2.09
RNU6-54P-201ENST00000365563 MORN1Q5T089 497 aa1.99□□□□□ -2.09
RNU6-54P-201ENST00000365563 GPR161Q8N6U8 529 aaKnown RBP1.99□□□□□ -2.09
RNU6-54P-201ENST00000365563 NEDD1Q8NHV4 660 aa1.99□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms