RNA–Protein interactions for RNA: ENST00000365559.1

RNU4-48P-201, Transcript of RNA, U4 small nuclear 48, pseudogene, humanhuman

BASIC

Gene RNU4-48P, Length 182 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-48P-201ENST00000365559 SKIV2LQ15477 1246 aaKnown RBP7.25□□□□□ -1.25
RNU4-48P-201ENST00000365559 CSPP1Q1MSJ5 1256 aa7.25□□□□□ -1.25
RNU4-48P-201ENST00000365559 Q3C1V9 767 aa7.25□□□□□ -1.25
RNU4-48P-201ENST00000365559 IFFO2Q5TF58 517 aa7.25□□□□□ -1.25
RNU4-48P-201ENST00000365559 SPSB2Q99619 263 aa7.25□□□□□ -1.25
RNU4-48P-201ENST00000365559 SALL2Q9Y467 1007 aaPredicted RBP7.25□□□□□ -1.25
RNU4-48P-201ENST00000365559 ADH1BP00325 375 aa7.24□□□□□ -1.25
RNU4-48P-201ENST00000365559 CLK2P49760 499 aaKnown RBP7.24□□□□□ -1.25
RNU4-48P-201ENST00000365559 FAM160A2Q8N612 972 aaPredicted RBP7.24□□□□□ -1.25
RNU4-48P-201ENST00000365559 PROCA1Q8NCQ7 364 aaPredicted RBP7.24□□□□□ -1.25
RNU4-48P-201ENST00000365559 C6orf229H3BNL8 230 aa7.23□□□□□ -1.25
RNU4-48P-201ENST00000365559 QPCTQ16769 361 aa7.23□□□□□ -1.25
RNU4-48P-201ENST00000365559 FBXO31Q5XUX0 539 aaPredicted RBP7.22□□□□□ -1.25
RNU4-48P-201ENST00000365559 CABLES1Q8TDN4 633 aa7.22□□□□□ -1.25
RNU4-48P-201ENST00000365559 USB1Q9BQ65 265 aaKnown RBP7.22□□□□□ -1.25
RNU4-48P-201ENST00000365559 PRDM9Q9NQV7 894 aa7.22□□□□□ -1.25
RNU4-48P-201ENST00000365559 S1PR4O95977 384 aa7.21□□□□□ -1.26
RNU4-48P-201ENST00000365559 HRCP23327 699 aa7.21□□□□□ -1.26
RNU4-48P-201ENST00000365559 MTMR2Q13614 643 aa7.21□□□□□ -1.26
RNU4-48P-201ENST00000365559 TUSC1Q2TAM9 212 aa7.21□□□□□ -1.26
RNU4-48P-201ENST00000365559 PPP1R18Q6NYC8 613 aa7.21□□□□□ -1.26
RNU4-48P-201ENST00000365559 GOPCQ9HD26 462 aa7.21□□□□□ -1.26
RNU4-48P-201ENST00000365559 A0A0G2JS52 829 aa7.2□□□□□ -1.26
RNU4-48P-201ENST00000365559 LILRB3O75022 631 aa7.2□□□□□ -1.26
RNU4-48P-201ENST00000365559 RETREG3Q86VR2 466 aa7.2□□□□□ -1.26
RNU4-48P-201ENST00000365559 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.2□□□□□ -1.26
RNU4-48P-201ENST00000365559 SLC6A16Q9GZN6 736 aa7.2□□□□□ -1.26
RNU4-48P-201ENST00000365559 ZBTB3Q9H5J0 574 aa7.2□□□□□ -1.26
RNU4-48P-201ENST00000365559 MSS51Q4VC12 460 aa7.19□□□□□ -1.26
RNU4-48P-201ENST00000365559 RTL5Q5HYW3 569 aaPredicted RBP7.19□□□□□ -1.26
RNU4-48P-201ENST00000365559 PRPF38BQ5VTL8 546 aaKnown RBP7.19□□□□□ -1.26
RNU4-48P-201ENST00000365559 PCMTD1Q96MG8 357 aaPredicted RBP7.19□□□□□ -1.26
RNU4-48P-201ENST00000365559 ATP1B4Q9UN42 357 aaPredicted RBP7.19□□□□□ -1.26
RNU4-48P-201ENST00000365559 NUTM2BA6NNL0 878 aaPredicted RBP7.18□□□□□ -1.26
RNU4-48P-201ENST00000365559 NUTM2EB1AL46 878 aaPredicted RBP7.18□□□□□ -1.26
RNU4-48P-201ENST00000365559 CFAP99D6REC4 459 aa7.18□□□□□ -1.26
RNU4-48P-201ENST00000365559 PPEF1O14829 653 aaPredicted RBP7.18□□□□□ -1.26
RNU4-48P-201ENST00000365559 NUTM2DQ5VT03 806 aaPredicted RBP7.18□□□□□ -1.26
RNU4-48P-201ENST00000365559 NUTM2AQ8IVF1 878 aaPredicted RBP7.18□□□□□ -1.26
RNU4-48P-201ENST00000365559 PRR7Q8TB68 274 aa7.18□□□□□ -1.26
RNU4-48P-201ENST00000365559 SPDYE5A6NIY4 337 aa7.17□□□□□ -1.26
RNU4-48P-201ENST00000365559 RNF223E7ERA6 249 aa7.17□□□□□ -1.26
RNU4-48P-201ENST00000365559 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.17□□□□□ -1.26
RNU4-48P-201ENST00000365559 DXOO77932 396 aaKnown RBP7.16□□□□□ -1.26
RNU4-48P-201ENST00000365559 MMP16P51512 607 aa7.16□□□□□ -1.26
RNU4-48P-201ENST00000365559 JUNDP17535 347 aa7.15□□□□□ -1.26
RNU4-48P-201ENST00000365559 GGCXP38435 758 aa7.15□□□□□ -1.26
RNU4-48P-201ENST00000365559 PPP2R2DQ66LE6 453 aa7.14□□□□□ -1.27
RNU4-48P-201ENST00000365559 TMEM132AQ24JP5 1023 aa7.13□□□□□ -1.27
RNU4-48P-201ENST00000365559 PLA2G2CQ5R387 149 aa7.13□□□□□ -1.27
RNU4-48P-201ENST00000365559 ANKLE1Q8NAG6 615 aa7.13□□□□□ -1.27
RNU4-48P-201ENST00000365559 TSC1Q92574 1164 aa7.13□□□□□ -1.27
RNU4-48P-201ENST00000365559 FCF1Q9Y324 198 aaKnown RBP7.13□□□□□ -1.27
RNU4-48P-201ENST00000365559 PER1O15534 1290 aaPredicted RBP7.12□□□□□ -1.27
RNU4-48P-201ENST00000365559 RFC5P40937 340 aa7.12□□□□□ -1.27
RNU4-48P-201ENST00000365559 DESI1Q6ICB0 168 aa7.12□□□□□ -1.27
RNU4-48P-201ENST00000365559 EMID1Q96A84 441 aaPredicted RBP7.11□□□□□ -1.27
RNU4-48P-201ENST00000365559 CTDSPL2Q05D32 466 aa7.1□□□□□ -1.27
RNU4-48P-201ENST00000365559 LYPD8Q6UX82 237 aa7.1□□□□□ -1.27
RNU4-48P-201ENST00000365559 NUDT12Q9BQG2 462 aa7.1□□□□□ -1.27
RNU4-48P-201ENST00000365559 AP1G2O75843 785 aa7.09□□□□□ -1.27
RNU4-48P-201ENST00000365559 PTPRNQ16849 979 aa7.09□□□□□ -1.27
RNU4-48P-201ENST00000365559 CCDC24Q8N4L8 307 aa7.09□□□□□ -1.27
RNU4-48P-201ENST00000365559 HELBQ8NG08 1087 aaPredicted RBP7.09□□□□□ -1.27
RNU4-48P-201ENST00000365559 CCNYL3P0C7X3 344 aa7.08□□□□□ -1.28
RNU4-48P-201ENST00000365559 PTCRAQ6ISU1 281 aaPredicted RBP7.08□□□□□ -1.28
RNU4-48P-201ENST00000365559 LIAT1Q6ZQX7 453 aa7.08□□□□□ -1.28
RNU4-48P-201ENST00000365559 LRRN4Q8WUT4 740 aa7.07□□□□□ -1.28
RNU4-48P-201ENST00000365559 PRKD2Q9BZL6 878 aa7.07□□□□□ -1.28
RNU4-48P-201ENST00000365559 EVA1BQ9NVM1 165 aa7.07□□□□□ -1.28
RNU4-48P-201ENST00000365559 F12P00748 615 aaPredicted RBP7.06□□□□□ -1.28
RNU4-48P-201ENST00000365559 USP17L8P0C7I0 530 aa7.06□□□□□ -1.28
RNU4-48P-201ENST00000365559 SLC19A1P41440 591 aa7.06□□□□□ -1.28
RNU4-48P-201ENST00000365559 TMEM259Q4ZIN3 620 aa7.06□□□□□ -1.28
RNU4-48P-201ENST00000365559 MAP10Q9P2G4 905 aa7.06□□□□□ -1.28
RNU4-48P-201ENST00000365559 KCNH2Q12809 1159 aa7.05□□□□□ -1.28
RNU4-48P-201ENST00000365559 RGS20O76081 388 aa7.04□□□□□ -1.28
RNU4-48P-201ENST00000365559 CTHP32929 405 aa7.04□□□□□ -1.28
RNU4-48P-201ENST00000365559 HMX1Q9NP08 348 aaPredicted RBP7.04□□□□□ -1.28
RNU4-48P-201ENST00000365559 V9GY48 417 aaPredicted RBP7.04□□□□□ -1.28
RNU4-48P-201ENST00000365559 RPIAP49247 311 aa7.03□□□□□ -1.28
RNU4-48P-201ENST00000365559 UNC93B1Q9H1C4 597 aa7.03□□□□□ -1.28
RNU4-48P-201ENST00000365559 ZBTB24O43167 697 aaPredicted RBP7.02□□□□□ -1.29
RNU4-48P-201ENST00000365559 TRIM32Q13049 653 aa7.02□□□□□ -1.29
RNU4-48P-201ENST00000365559 SPRYD7Q5W111 196 aa7.02□□□□□ -1.29
RNU4-48P-201ENST00000365559 EPS8L1Q8TE68 723 aa7.02□□□□□ -1.29
RNU4-48P-201ENST00000365559 SNRKQ9NRH2 765 aa7.02□□□□□ -1.29
RNU4-48P-201ENST00000365559 NR6A1Q15406 480 aa7.01□□□□□ -1.29
RNU4-48P-201ENST00000365559 BANK1Q8NDB2 785 aa7.01□□□□□ -1.29
RNU4-48P-201ENST00000365559 CD2BP2O95400 341 aaKnown RBP7□□□□□ -1.29
RNU4-48P-201ENST00000365559 ZNF697Q5TEC3 545 aa7□□□□□ -1.29
RNU4-48P-201ENST00000365559 MTMR14Q8NCE2 650 aa7□□□□□ -1.29
RNU4-48P-201ENST00000365559 BAP1Q92560 729 aa7□□□□□ -1.29
RNU4-48P-201ENST00000365559 TRIM34Q9BYJ4 488 aa7□□□□□ -1.29
RNU4-48P-201ENST00000365559 SKOR1P84550 965 aa6.99□□□□□ -1.29
RNU4-48P-201ENST00000365559 LINC01559Q495D7 138 aa6.99□□□□□ -1.29
RNU4-48P-201ENST00000365559 ZNF598Q86UK7 904 aaKnown RBP6.99□□□□□ -1.29
RNU4-48P-201ENST00000365559 GJD4Q96KN9 370 aaPredicted RBP6.99□□□□□ -1.29
RNU4-48P-201ENST00000365559 SH3BP2P78314 561 aa6.97□□□□□ -1.29
RNU4-48P-201ENST00000365559 MCM6Q14566 821 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms