RNA–Protein interactions for RNA: ENST00000364738.1

RNU4-42P-201, Transcript of RNA, U4 small nuclear 42, pseudogene, humanhuman

BASIC

Gene RNU4-42P, Length 142 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-42P-201ENST00000364738 FAM217BQ9NTX9 383 aaPredicted RBP6.48□□□□□ -1.37
RNU4-42P-201ENST00000364738 HOXA2O43364 376 aa6.47□□□□□ -1.37
RNU4-42P-201ENST00000364738 CD2BP2O95400 341 aaKnown RBP6.47□□□□□ -1.37
RNU4-42P-201ENST00000364738 PKD2L1Q9P0L9 805 aa6.47□□□□□ -1.37
RNU4-42P-201ENST00000364738 ZBTB24O43167 697 aaPredicted RBP6.46□□□□□ -1.38
RNU4-42P-201ENST00000364738 MYT1Q01538 1121 aa6.46□□□□□ -1.38
RNU4-42P-201ENST00000364738 ZNF787Q6DD87 383 aa6.46□□□□□ -1.38
RNU4-42P-201ENST00000364738 USB1Q9BQ65 265 aaKnown RBP6.46□□□□□ -1.38
RNU4-42P-201ENST00000364738 MMP16P51512 607 aa6.45□□□□□ -1.38
RNU4-42P-201ENST00000364738 GUCA2AQ02747 115 aa6.45□□□□□ -1.38
RNU4-42P-201ENST00000364738 NUTM1Q86Y26 1132 aa6.45□□□□□ -1.38
RNU4-42P-201ENST00000364738 DXOO77932 396 aaKnown RBP6.44□□□□□ -1.38
RNU4-42P-201ENST00000364738 TTLL12Q14166 644 aaPredicted RBP6.44□□□□□ -1.38
RNU4-42P-201ENST00000364738 TRIM32Q13049 653 aa6.43□□□□□ -1.38
RNU4-42P-201ENST00000364738 BARGINQ6ZT62 677 aa6.43□□□□□ -1.38
RNU4-42P-201ENST00000364738 CYP4X1Q8N118 509 aa6.43□□□□□ -1.38
RNU4-42P-201ENST00000364738 REPIN1Q9BWE0 567 aaKnown RBP6.43□□□□□ -1.38
RNU4-42P-201ENST00000364738 ST8SIA5O15466 376 aa6.42□□□□□ -1.38
RNU4-42P-201ENST00000364738 ZMYND10O75800 440 aa6.42□□□□□ -1.38
RNU4-42P-201ENST00000364738 CCDC24Q8N4L8 307 aa6.42□□□□□ -1.38
RNU4-42P-201ENST00000364738 ZC3H15Q8WU90 426 aaKnown RBP6.42□□□□□ -1.38
RNU4-42P-201ENST00000364738 FDX1P10109 184 aa6.41□□□□□ -1.38
RNU4-42P-201ENST00000364738 SSTR3P32745 418 aaPredicted RBP6.41□□□□□ -1.38
RNU4-42P-201ENST00000364738 SYMPKQ92797 1274 aaKnown RBP6.41□□□□□ -1.38
RNU4-42P-201ENST00000364738 TOR4AQ9NXH8 423 aa6.41□□□□□ -1.38
RNU4-42P-201ENST00000364738 TTC24A2A3L6 582 aaPredicted RBP6.4□□□□□ -1.38
RNU4-42P-201ENST00000364738 WNT7AO00755 349 aa6.4□□□□□ -1.38
RNU4-42P-201ENST00000364738 JUNDP17535 347 aa6.4□□□□□ -1.38
RNU4-42P-201ENST00000364738 AMHR2Q16671 573 aa6.4□□□□□ -1.38
RNU4-42P-201ENST00000364738 RETREG3Q86VR2 466 aa6.4□□□□□ -1.38
RNU4-42P-201ENST00000364738 AAASQ9NRG9 546 aa6.4□□□□□ -1.38
RNU4-42P-201ENST00000364738 C6orf229H3BNL8 230 aa6.39□□□□□ -1.39
RNU4-42P-201ENST00000364738 GIGYF2Q6Y7W6 1299 aaKnown RBP6.39□□□□□ -1.39
RNU4-42P-201ENST00000364738 SPIRE2Q8WWL2 714 aa6.38□□□□□ -1.39
RNU4-42P-201ENST00000364738 PCDHGC3Q9UN70 934 aa6.38□□□□□ -1.39
RNU4-42P-201ENST00000364738 POTECB2RU33 542 aa6.37□□□□□ -1.39
RNU4-42P-201ENST00000364738 CRIPAKQ8N1N5 446 aa6.37□□□□□ -1.39
RNU4-42P-201ENST00000364738 MRGPRX2Q96LB1 330 aa6.37□□□□□ -1.39
RNU4-42P-201ENST00000364738 NUDT12Q9BQG2 462 aa6.37□□□□□ -1.39
RNU4-42P-201ENST00000364738 MOXD2PA6NHM9 499 aa6.36□□□□□ -1.39
RNU4-42P-201ENST00000364738 AXIN1O15169 862 aa6.36□□□□□ -1.39
RNU4-42P-201ENST00000364738 AVPP01185 164 aa6.36□□□□□ -1.39
RNU4-42P-201ENST00000364738 NDUFV2P19404 249 aa6.36□□□□□ -1.39
RNU4-42P-201ENST00000364738 CTC1Q2NKJ3 1217 aa6.36□□□□□ -1.39
RNU4-42P-201ENST00000364738 SNIP1Q8TAD8 396 aaKnown RBP6.36□□□□□ -1.39
RNU4-42P-201ENST00000364738 ZNF775Q96BV0 537 aaPredicted RBP6.36□□□□□ -1.39
RNU4-42P-201ENST00000364738 BEGAINQ9BUH8 593 aa6.36□□□□□ -1.39
RNU4-42P-201ENST00000364738 MS4A1P11836 297 aa6.35□□□□□ -1.39
RNU4-42P-201ENST00000364738 SMPD1P17405 629 aa6.35□□□□□ -1.39
RNU4-42P-201ENST00000364738 WNT7BP56706 349 aa6.35□□□□□ -1.39
RNU4-42P-201ENST00000364738 SKOR1P84550 965 aa6.35□□□□□ -1.39
RNU4-42P-201ENST00000364738 PARP9Q8IXQ6 854 aa6.35□□□□□ -1.39
RNU4-42P-201ENST00000364738 J3QL48 77 aa6.34□□□□□ -1.39
RNU4-42P-201ENST00000364738 CCNYL3P0C7X3 344 aa6.34□□□□□ -1.39
RNU4-42P-201ENST00000364738 RC3H1Q5TC82 1133 aaKnown RBP6.34□□□□□ -1.39
RNU4-42P-201ENST00000364738 DACH1Q9UI36 760 aa6.34□□□□□ -1.39
RNU4-42P-201ENST00000364738 TRIM66O15016 1216 aa6.33□□□□□ -1.4
RNU4-42P-201ENST00000364738 MTMR2Q13614 643 aa6.33□□□□□ -1.4
RNU4-42P-201ENST00000364738 PRR7Q8TB68 274 aa6.33□□□□□ -1.4
RNU4-42P-201ENST00000364738 TBC1D2Q9BYX2 928 aa6.33□□□□□ -1.4
RNU4-42P-201ENST00000364738 SPDYE5A6NIY4 337 aa6.32□□□□□ -1.4
RNU4-42P-201ENST00000364738 SMCPP49901 116 aaPredicted RBP6.32□□□□□ -1.4
RNU4-42P-201ENST00000364738 DIXDC1Q155Q3 683 aa6.32□□□□□ -1.4
RNU4-42P-201ENST00000364738 PTPRNQ16849 979 aa6.32□□□□□ -1.4
RNU4-42P-201ENST00000364738 PTCRAQ6ISU1 281 aaPredicted RBP6.32□□□□□ -1.4
RNU4-42P-201ENST00000364738 AK7Q96M32 723 aa6.32□□□□□ -1.4
RNU4-42P-201ENST00000364738 RSBN1LQ6PCB5 846 aaPredicted RBP6.31□□□□□ -1.4
RNU4-42P-201ENST00000364738 EHBP1Q8NDI1 1231 aa6.31□□□□□ -1.4
RNU4-42P-201ENST00000364738 GMPR2Q9P2T1 348 aaKnown RBP6.31□□□□□ -1.4
RNU4-42P-201ENST00000364738 C11orf95C9JLR9 678 aaPredicted RBP6.3□□□□□ -1.4
RNU4-42P-201ENST00000364738 ALDH1A1P00352 501 aa6.3□□□□□ -1.4
RNU4-42P-201ENST00000364738 HPS1Q92902 700 aa6.3□□□□□ -1.4
RNU4-42P-201ENST00000364738 UNC93B1Q9H1C4 597 aa6.3□□□□□ -1.4
RNU4-42P-201ENST00000364738 GJA5P36382 358 aa6.29□□□□□ -1.4
RNU4-42P-201ENST00000364738 LINC01559Q495D7 138 aa6.29□□□□□ -1.4
RNU4-42P-201ENST00000364738 SPTLC1O15269 473 aa6.28□□□□□ -1.4
RNU4-42P-201ENST00000364738 SH3BP2P78314 561 aa6.28□□□□□ -1.4
RNU4-42P-201ENST00000364738 KCNH2Q12809 1159 aa6.28□□□□□ -1.4
RNU4-42P-201ENST00000364738 DESI1Q6ICB0 168 aa6.28□□□□□ -1.4
RNU4-42P-201ENST00000364738 ZBTB3Q9H5J0 574 aa6.28□□□□□ -1.4
RNU4-42P-201ENST00000364738 ATP13A2Q9NQ11 1180 aa6.28□□□□□ -1.4
RNU4-42P-201ENST00000364738 EVA1BQ9NVM1 165 aa6.28□□□□□ -1.4
RNU4-42P-201ENST00000364738 PCDHB15Q9Y5E8 787 aa6.28□□□□□ -1.4
RNU4-42P-201ENST00000364738 CFAP99D6REC4 459 aa6.27□□□□□ -1.41
RNU4-42P-201ENST00000364738 PDE4DQ08499 809 aa6.27□□□□□ -1.41
RNU4-42P-201ENST00000364738 CSPP1Q1MSJ5 1256 aa6.27□□□□□ -1.41
RNU4-42P-201ENST00000364738 WASF2Q9Y6W5 498 aa6.27□□□□□ -1.41
RNU4-42P-201ENST00000364738 SIAH2O43255 324 aa6.26□□□□□ -1.41
RNU4-42P-201ENST00000364738 HRCP23327 699 aa6.26□□□□□ -1.41
RNU4-42P-201ENST00000364738 CTHP32929 405 aa6.26□□□□□ -1.41
RNU4-42P-201ENST00000364738 RIC3Q7Z5B4 369 aa6.26□□□□□ -1.41
RNU4-42P-201ENST00000364738 ZNF511Q8NB15 262 aa6.26□□□□□ -1.41
RNU4-42P-201ENST00000364738 BAP1Q92560 729 aa6.26□□□□□ -1.41
RNU4-42P-201ENST00000364738 SLC24A3Q9HC58 644 aa6.26□□□□□ -1.41
RNU4-42P-201ENST00000364738 LYPD8Q6UX82 237 aa6.25□□□□□ -1.41
RNU4-42P-201ENST00000364738 CABLES1Q8TDN4 633 aa6.25□□□□□ -1.41
RNU4-42P-201ENST00000364738 SENP2Q9HC62 589 aa6.25□□□□□ -1.41
RNU4-42P-201ENST00000364738 TLL2Q9Y6L7 1015 aa6.25□□□□□ -1.41
RNU4-42P-201ENST00000364738 PRPF38BQ5VTL8 546 aaKnown RBP6.24□□□□□ -1.41
RNU4-42P-201ENST00000364738 MYSM1Q5VVJ2 828 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms