RNA–Protein interactions for RNA: ENST00000364588.1

RNU4-4P-201, Transcript of RNA, U4 small nuclear 4, pseudogene, humanhuman

BASIC

Gene RNU4-4P, Length 130 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-4P-201ENST00000364588 SLC27A5Q9Y2P5 690 aa9.87□□□□□ -0.83
RNU4-4P-201ENST00000364588 SALL2Q9Y467 1007 aaPredicted RBP9.87□□□□□ -0.83
RNU4-4P-201ENST00000364588 FMNL1O95466 1100 aaPredicted RBP9.86□□□□□ -0.83
RNU4-4P-201ENST00000364588 NKX2-3Q8TAU0 364 aa9.86□□□□□ -0.83
RNU4-4P-201ENST00000364588 MS4A1P11836 297 aa9.85□□□□□ -0.83
RNU4-4P-201ENST00000364588 SPSB2Q99619 263 aa9.85□□□□□ -0.83
RNU4-4P-201ENST00000364588 WIZO95785 1651 aa9.85□□□□□ -0.83
RNU4-4P-201ENST00000364588 PDS5BQ9NTI5 1447 aa9.84□□□□□ -0.83
RNU4-4P-201ENST00000364588 TPRNQ4KMQ1 711 aa9.84□□□□□ -0.83
RNU4-4P-201ENST00000364588 PPP1R18Q6NYC8 613 aa9.84□□□□□ -0.83
RNU4-4P-201ENST00000364588 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.84□□□□□ -0.83
RNU4-4P-201ENST00000364588 SLC6A16Q9GZN6 736 aa9.83□□□□□ -0.84
RNU4-4P-201ENST00000364588 SPIRE2Q8WWL2 714 aa9.82□□□□□ -0.84
RNU4-4P-201ENST00000364588 THAP11Q96EK4 314 aa9.82□□□□□ -0.84
RNU4-4P-201ENST00000364588 CADPSQ9ULU8 1353 aa9.81□□□□□ -0.84
RNU4-4P-201ENST00000364588 S1PR4O95977 384 aa9.81□□□□□ -0.84
RNU4-4P-201ENST00000364588 MSS51Q4VC12 460 aa9.81□□□□□ -0.84
RNU4-4P-201ENST00000364588 BRICD5Q6PL45 260 aa9.81□□□□□ -0.84
RNU4-4P-201ENST00000364588 FDX1P10109 184 aa9.8□□□□□ -0.84
RNU4-4P-201ENST00000364588 RNF19BQ6ZMZ0 732 aa9.8□□□□□ -0.84
RNU4-4P-201ENST00000364588 GJA5P36382 358 aa9.79□□□□□ -0.84
RNU4-4P-201ENST00000364588 HLA-CQ95604 372 aa9.79□□□□□ -0.84
RNU4-4P-201ENST00000364588 TBC1D2Q9BYX2 928 aa9.79□□□□□ -0.84
RNU4-4P-201ENST00000364588 ANKLE1Q8NAG6 615 aa9.78□□□□□ -0.84
RNU4-4P-201ENST00000364588 KDM4CQ9H3R0 1056 aa9.78□□□□□ -0.84
RNU4-4P-201ENST00000364588 RNF223E7ERA6 249 aa9.77□□□□□ -0.85
RNU4-4P-201ENST00000364588 GUCA2AQ02747 115 aa9.77□□□□□ -0.85
RNU4-4P-201ENST00000364588 DDRGK1Q96HY6 314 aa9.77□□□□□ -0.85
RNU4-4P-201ENST00000364588 USB1Q9BQ65 265 aaKnown RBP9.77□□□□□ -0.85
RNU4-4P-201ENST00000364588 MRC2Q9UBG0 1479 aa9.77□□□□□ -0.85
RNU4-4P-201ENST00000364588 MOXD2PA6NHM9 499 aa9.76□□□□□ -0.85
RNU4-4P-201ENST00000364588 GPBP1L1Q9HC44 474 aaPredicted RBP9.76□□□□□ -0.85
RNU4-4P-201ENST00000364588 RSBN1LQ6PCB5 846 aaPredicted RBP9.75□□□□□ -0.85
RNU4-4P-201ENST00000364588 RETREG3Q86VR2 466 aa9.75□□□□□ -0.85
RNU4-4P-201ENST00000364588 RSPH6AQ9H0K4 717 aa9.75□□□□□ -0.85
RNU4-4P-201ENST00000364588 V9GY48 417 aaPredicted RBP9.75□□□□□ -0.85
RNU4-4P-201ENST00000364588 WDR62O43379 1518 aa9.74□□□□□ -0.85
RNU4-4P-201ENST00000364588 CEP164Q9UPV0 1460 aa9.73□□□□□ -0.85
RNU4-4P-201ENST00000364588 SPDYE5A6NIY4 337 aa9.73□□□□□ -0.85
RNU4-4P-201ENST00000364588 C6orf229H3BNL8 230 aa9.73□□□□□ -0.85
RNU4-4P-201ENST00000364588 SPTLC1O15269 473 aa9.73□□□□□ -0.85
RNU4-4P-201ENST00000364588 NEUROD2Q15784 382 aa9.73□□□□□ -0.85
RNU4-4P-201ENST00000364588 FAM160A2Q8N612 972 aaPredicted RBP9.73□□□□□ -0.85
RNU4-4P-201ENST00000364588 PRKD2Q9BZL6 878 aa9.73□□□□□ -0.85
RNU4-4P-201ENST00000364588 PRDM9Q9NQV7 894 aa9.73□□□□□ -0.85
RNU4-4P-201ENST00000364588 NDUFV2P19404 249 aa9.72□□□□□ -0.85
RNU4-4P-201ENST00000364588 MMP16P51512 607 aa9.72□□□□□ -0.85
RNU4-4P-201ENST00000364588 MTMR2Q13614 643 aa9.72□□□□□ -0.85
RNU4-4P-201ENST00000364588 MYSM1Q5VVJ2 828 aa9.72□□□□□ -0.85
RNU4-4P-201ENST00000364588 PCDHGC3Q9UN70 934 aa9.72□□□□□ -0.85
RNU4-4P-201ENST00000364588 RSF1Q96T23 1441 aaPredicted RBP9.72□□□□□ -0.85
RNU4-4P-201ENST00000364588 FANCD2Q9BXW9 1451 aa9.72□□□□□ -0.85
RNU4-4P-201ENST00000364588 DXOO77932 396 aaKnown RBP9.71□□□□□ -0.86
RNU4-4P-201ENST00000364588 FCF1Q9Y324 198 aaKnown RBP9.71□□□□□ -0.86
RNU4-4P-201ENST00000364588 CLK2P49760 499 aaKnown RBP9.7□□□□□ -0.86
RNU4-4P-201ENST00000364588 TUSC1Q2TAM9 212 aa9.7□□□□□ -0.86
RNU4-4P-201ENST00000364588 PRPF38BQ5VTL8 546 aaKnown RBP9.7□□□□□ -0.86
RNU4-4P-201ENST00000364588 RIC3Q7Z5B4 369 aa9.7□□□□□ -0.86
RNU4-4P-201ENST00000364588 ZBTB3Q9H5J0 574 aa9.7□□□□□ -0.86
RNU4-4P-201ENST00000364588 TOP2AP11388 1531 aaKnown RBP9.69□□□□□ -0.86
RNU4-4P-201ENST00000364588 JUNDP17535 347 aa9.69□□□□□ -0.86
RNU4-4P-201ENST00000364588 CFTRP13569 1480 aa9.68□□□□□ -0.86
RNU4-4P-201ENST00000364588 PPEF1O14829 653 aaPredicted RBP9.68□□□□□ -0.86
RNU4-4P-201ENST00000364588 SH3D19Q5HYK7 790 aa9.68□□□□□ -0.86
RNU4-4P-201ENST00000364588 SYMPKQ92797 1274 aaKnown RBP9.68□□□□□ -0.86
RNU4-4P-201ENST00000364588 FAM117AQ9C073 453 aa9.68□□□□□ -0.86
RNU4-4P-201ENST00000364588 SLC19A1P41440 591 aa9.67□□□□□ -0.86
RNU4-4P-201ENST00000364588 BRPF1P55201 1214 aaPredicted RBP9.66□□□□□ -0.86
RNU4-4P-201ENST00000364588 RPIAP49247 311 aa9.65□□□□□ -0.86
RNU4-4P-201ENST00000364588 DESI1Q6ICB0 168 aa9.65□□□□□ -0.86
RNU4-4P-201ENST00000364588 PRR7Q8TB68 274 aa9.65□□□□□ -0.86
RNU4-4P-201ENST00000364588 LIMD1Q9UGP4 676 aa9.65□□□□□ -0.86
RNU4-4P-201ENST00000364588 CSPP1Q1MSJ5 1256 aa9.64□□□□□ -0.87
RNU4-4P-201ENST00000364588 PLA2G2CQ5R387 149 aa9.64□□□□□ -0.87
RNU4-4P-201ENST00000364588 IRX2Q9BZI1 471 aaPredicted RBP9.64□□□□□ -0.87
RNU4-4P-201ENST00000364588 URB2Q14146 1524 aaKnown RBP9.64□□□□□ -0.87
RNU4-4P-201ENST00000364588 PLEKHG3A1L390 1219 aa9.63□□□□□ -0.87
RNU4-4P-201ENST00000364588 ZBTB24O43167 697 aaPredicted RBP9.63□□□□□ -0.87
RNU4-4P-201ENST00000364588 HRCP23327 699 aa9.63□□□□□ -0.87
RNU4-4P-201ENST00000364588 SKIV2LQ15477 1246 aaKnown RBP9.63□□□□□ -0.87
RNU4-4P-201ENST00000364588 PTPRNQ16849 979 aa9.63□□□□□ -0.87
RNU4-4P-201ENST00000364588 PCDHB15Q9Y5E8 787 aa9.63□□□□□ -0.87
RNU4-4P-201ENST00000364588 PRDM2Q13029 1718 aa9.62□□□□□ -0.87
RNU4-4P-201ENST00000364588 NUTM2BA6NNL0 878 aaPredicted RBP9.62□□□□□ -0.87
RNU4-4P-201ENST00000364588 NUTM2EB1AL46 878 aaPredicted RBP9.62□□□□□ -0.87
RNU4-4P-201ENST00000364588 NUTM2DQ5VT03 806 aaPredicted RBP9.62□□□□□ -0.87
RNU4-4P-201ENST00000364588 SPRYD7Q5W111 196 aa9.62□□□□□ -0.87
RNU4-4P-201ENST00000364588 NUTM2AQ8IVF1 878 aaPredicted RBP9.62□□□□□ -0.87
RNU4-4P-201ENST00000364588 NUDT12Q9BQG2 462 aa9.62□□□□□ -0.87
RNU4-4P-201ENST00000364588 CCNYL3P0C7X3 344 aa9.61□□□□□ -0.87
RNU4-4P-201ENST00000364588 LAPTM4AQ15012 233 aa9.61□□□□□ -0.87
RNU4-4P-201ENST00000364588 LIAT1Q6ZQX7 453 aa9.61□□□□□ -0.87
RNU4-4P-201ENST00000364588 ZNF598Q86UK7 904 aaKnown RBP9.61□□□□□ -0.87
RNU4-4P-201ENST00000364588 CABLES1Q8TDN4 633 aa9.61□□□□□ -0.87
RNU4-4P-201ENST00000364588 POLR3EQ9NVU0 708 aa9.61□□□□□ -0.87
RNU4-4P-201ENST00000364588 LILRB3O75022 631 aa9.6□□□□□ -0.87
RNU4-4P-201ENST00000364588 ZNF697Q5TEC3 545 aa9.6□□□□□ -0.87
RNU4-4P-201ENST00000364588 CCDC24Q8N4L8 307 aa9.6□□□□□ -0.87
RNU4-4P-201ENST00000364588 HELBQ8NG08 1087 aaPredicted RBP9.6□□□□□ -0.87
RNU4-4P-201ENST00000364588 EMID1Q96A84 441 aaPredicted RBP9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms