RNA–Protein interactions for RNA: ENST00000364047.1

RNU6-553P-201, Transcript of RNA, U6 small nuclear 553, pseudogene, humanhuman

BASIC

Gene RNU6-553P, Length 96 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-553P-201ENST00000364047 PRDM9Q9NQV7 894 aa9.58□□□□□ -0.88
RNU6-553P-201ENST00000364047 MSS51Q4VC12 460 aa9.57□□□□□ -0.88
RNU6-553P-201ENST00000364047 RSBN1LQ6PCB5 846 aaPredicted RBP9.57□□□□□ -0.88
RNU6-553P-201ENST00000364047 SYMPKQ92797 1274 aaKnown RBP9.57□□□□□ -0.88
RNU6-553P-201ENST00000364047 C6orf229H3BNL8 230 aa9.56□□□□□ -0.88
RNU6-553P-201ENST00000364047 MYSM1Q5VVJ2 828 aa9.56□□□□□ -0.88
RNU6-553P-201ENST00000364047 ANKLE1Q8NAG6 615 aa9.56□□□□□ -0.88
RNU6-553P-201ENST00000364047 DDRGK1Q96HY6 314 aa9.56□□□□□ -0.88
RNU6-553P-201ENST00000364047 FAM117AQ9C073 453 aa9.56□□□□□ -0.88
RNU6-553P-201ENST00000364047 SPTLC1O15269 473 aa9.55□□□□□ -0.88
RNU6-553P-201ENST00000364047 GJA5P36382 358 aa9.55□□□□□ -0.88
RNU6-553P-201ENST00000364047 RIC3Q7Z5B4 369 aa9.55□□□□□ -0.88
RNU6-553P-201ENST00000364047 PRKD2Q9BZL6 878 aa9.55□□□□□ -0.88
RNU6-553P-201ENST00000364047 RETREG3Q86VR2 466 aa9.54□□□□□ -0.88
RNU6-553P-201ENST00000364047 RSPH6AQ9H0K4 717 aa9.54□□□□□ -0.88
RNU6-553P-201ENST00000364047 BRPF1P55201 1214 aaPredicted RBP9.53□□□□□ -0.88
RNU6-553P-201ENST00000364047 CSPP1Q1MSJ5 1256 aa9.53□□□□□ -0.88
RNU6-553P-201ENST00000364047 MTMR2Q13614 643 aa9.52□□□□□ -0.89
RNU6-553P-201ENST00000364047 LIMD1Q9UGP4 676 aa9.52□□□□□ -0.89
RNU6-553P-201ENST00000364047 FCF1Q9Y324 198 aaKnown RBP9.52□□□□□ -0.89
RNU6-553P-201ENST00000364047 PCDHB15Q9Y5E8 787 aa9.52□□□□□ -0.89
RNU6-553P-201ENST00000364047 PLEKHG3A1L390 1219 aa9.51□□□□□ -0.89
RNU6-553P-201ENST00000364047 DXOO77932 396 aaKnown RBP9.51□□□□□ -0.89
RNU6-553P-201ENST00000364047 MMP16P51512 607 aa9.51□□□□□ -0.89
RNU6-553P-201ENST00000364047 POLR3EQ9NVU0 708 aa9.51□□□□□ -0.89
RNU6-553P-201ENST00000364047 V9GY48 417 aaPredicted RBP9.51□□□□□ -0.89
RNU6-553P-201ENST00000364047 CLK2P49760 499 aaKnown RBP9.5□□□□□ -0.89
RNU6-553P-201ENST00000364047 ZBTB3Q9H5J0 574 aa9.5□□□□□ -0.89
RNU6-553P-201ENST00000364047 SPDYE5A6NIY4 337 aa9.49□□□□□ -0.89
RNU6-553P-201ENST00000364047 JUNDP17535 347 aa9.49□□□□□ -0.89
RNU6-553P-201ENST00000364047 SLC19A1P41440 591 aa9.49□□□□□ -0.89
RNU6-553P-201ENST00000364047 PLA2G2CQ5R387 149 aa9.49□□□□□ -0.89
RNU6-553P-201ENST00000364047 HRCP23327 699 aa9.48□□□□□ -0.89
RNU6-553P-201ENST00000364047 PRPF38BQ5VTL8 546 aaKnown RBP9.48□□□□□ -0.89
RNU6-553P-201ENST00000364047 PRR7Q8TB68 274 aa9.48□□□□□ -0.89
RNU6-553P-201ENST00000364047 CABLES1Q8TDN4 633 aa9.48□□□□□ -0.89
RNU6-553P-201ENST00000364047 EMID1Q96A84 441 aaPredicted RBP9.48□□□□□ -0.89
RNU6-553P-201ENST00000364047 QPCTQ16769 361 aa9.47□□□□□ -0.89
RNU6-553P-201ENST00000364047 TUSC1Q2TAM9 212 aa9.47□□□□□ -0.89
RNU6-553P-201ENST00000364047 SH3D19Q5HYK7 790 aa9.47□□□□□ -0.89
RNU6-553P-201ENST00000364047 LIAT1Q6ZQX7 453 aa9.47□□□□□ -0.89
RNU6-553P-201ENST00000364047 NUTM2BA6NNL0 878 aaPredicted RBP9.46□□□□□ -0.9
RNU6-553P-201ENST00000364047 NUTM2EB1AL46 878 aaPredicted RBP9.46□□□□□ -0.9
RNU6-553P-201ENST00000364047 SKIV2LQ15477 1246 aaKnown RBP9.46□□□□□ -0.9
RNU6-553P-201ENST00000364047 NUTM2DQ5VT03 806 aaPredicted RBP9.46□□□□□ -0.9
RNU6-553P-201ENST00000364047 NUTM2AQ8IVF1 878 aaPredicted RBP9.46□□□□□ -0.9
RNU6-553P-201ENST00000364047 IL27Q8NEV9 243 aa9.46□□□□□ -0.9
RNU6-553P-201ENST00000364047 ATP1B4Q9UN42 357 aaPredicted RBP9.46□□□□□ -0.9
RNU6-553P-201ENST00000364047 CCDC24Q8N4L8 307 aa9.45□□□□□ -0.9
RNU6-553P-201ENST00000364047 CFAP99D6REC4 459 aa9.44□□□□□ -0.9
RNU6-553P-201ENST00000364047 LILRB3O75022 631 aa9.44□□□□□ -0.9
RNU6-553P-201ENST00000364047 SPRYD7Q5W111 196 aa9.44□□□□□ -0.9
RNU6-553P-201ENST00000364047 ZBTB24O43167 697 aaPredicted RBP9.43□□□□□ -0.9
RNU6-553P-201ENST00000364047 NUDT12Q9BQG2 462 aa9.43□□□□□ -0.9
RNU6-553P-201ENST00000364047 RPIAP49247 311 aa9.42□□□□□ -0.9
RNU6-553P-201ENST00000364047 DESI1Q6ICB0 168 aa9.42□□□□□ -0.9
RNU6-553P-201ENST00000364047 PROCA1Q8NCQ7 364 aaPredicted RBP9.42□□□□□ -0.9
RNU6-553P-201ENST00000364047 TSC1Q92574 1164 aa9.42□□□□□ -0.9
RNU6-553P-201ENST00000364047 IRX2Q9BZI1 471 aaPredicted RBP9.42□□□□□ -0.9
RNU6-553P-201ENST00000364047 CCNYL3P0C7X3 344 aa9.41□□□□□ -0.9
RNU6-553P-201ENST00000364047 PTPRNQ16849 979 aa9.41□□□□□ -0.9
RNU6-553P-201ENST00000364047 RTL5Q5HYW3 569 aaPredicted RBP9.41□□□□□ -0.9
RNU6-553P-201ENST00000364047 ZNF697Q5TEC3 545 aa9.41□□□□□ -0.9
RNU6-553P-201ENST00000364047 ZNF598Q86UK7 904 aaKnown RBP9.4□□□□□ -0.9
RNU6-553P-201ENST00000364047 CD2BP2O95400 341 aaKnown RBP9.39□□□□□ -0.91
RNU6-553P-201ENST00000364047 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.39□□□□□ -0.91
RNU6-553P-201ENST00000364047 TRIM32Q13049 653 aa9.38□□□□□ -0.91
RNU6-553P-201ENST00000364047 LYPD8Q6UX82 237 aa9.38□□□□□ -0.91
RNU6-553P-201ENST00000364047 HELBQ8NG08 1087 aaPredicted RBP9.38□□□□□ -0.91
RNU6-553P-201ENST00000364047 PCMTD1Q96MG8 357 aaPredicted RBP9.38□□□□□ -0.91
RNU6-553P-201ENST00000364047 GOPCQ9HD26 462 aa9.38□□□□□ -0.91
RNU6-553P-201ENST00000364047 PTCRAQ6ISU1 281 aaPredicted RBP9.36□□□□□ -0.91
RNU6-553P-201ENST00000364047 EVA1BQ9NVM1 165 aa9.36□□□□□ -0.91
RNU6-553P-201ENST00000364047 PDZRN3Q9UPQ7 1066 aa9.36□□□□□ -0.91
RNU6-553P-201ENST00000364047 PER1O15534 1290 aaPredicted RBP9.35□□□□□ -0.91
RNU6-553P-201ENST00000364047 GFRA3O60609 400 aa9.35□□□□□ -0.91
RNU6-553P-201ENST00000364047 FBXO31Q5XUX0 539 aaPredicted RBP9.35□□□□□ -0.91
RNU6-553P-201ENST00000364047 CTHP32929 405 aa9.34□□□□□ -0.91
RNU6-553P-201ENST00000364047 KCNH2Q12809 1159 aa9.34□□□□□ -0.91
RNU6-553P-201ENST00000364047 FOXC1Q12948 553 aa9.34□□□□□ -0.91
RNU6-553P-201ENST00000364047 PPP2R2DQ66LE6 453 aa9.34□□□□□ -0.91
RNU6-553P-201ENST00000364047 TRIM67Q6ZTA4 783 aa9.34□□□□□ -0.91
RNU6-553P-201ENST00000364047 TNFRSF10AO00220 468 aa9.33□□□□□ -0.92
RNU6-553P-201ENST00000364047 LAPTM4AQ15012 233 aa9.33□□□□□ -0.92
RNU6-553P-201ENST00000364047 UNC93B1Q9H1C4 597 aa9.33□□□□□ -0.92
RNU6-553P-201ENST00000364047 MAP10Q9P2G4 905 aa9.32□□□□□ -0.92
RNU6-553P-201ENST00000364047 NRG2O14511 850 aaPredicted RBP9.31□□□□□ -0.92
RNU6-553P-201ENST00000364047 GDF9O60383 454 aa9.31□□□□□ -0.92
RNU6-553P-201ENST00000364047 F12P00748 615 aaPredicted RBP9.31□□□□□ -0.92
RNU6-553P-201ENST00000364047 PRR20EP86478 221 aa9.31□□□□□ -0.92
RNU6-553P-201ENST00000364047 PRR20CP86479 221 aa9.31□□□□□ -0.92
RNU6-553P-201ENST00000364047 PRR20DP86480 221 aa9.31□□□□□ -0.92
RNU6-553P-201ENST00000364047 PRR20BP86481 221 aa9.31□□□□□ -0.92
RNU6-553P-201ENST00000364047 PRR20AP86496 221 aa9.31□□□□□ -0.92
RNU6-553P-201ENST00000364047 CTDSPL2Q05D32 466 aa9.31□□□□□ -0.92
RNU6-553P-201ENST00000364047 PKD2L1Q9P0L9 805 aa9.31□□□□□ -0.92
RNU6-553P-201ENST00000364047 AP1G2O75843 785 aa9.3□□□□□ -0.92
RNU6-553P-201ENST00000364047 RFC5P40937 340 aa9.3□□□□□ -0.92
RNU6-553P-201ENST00000364047 WNT7BP56706 349 aa9.29□□□□□ -0.92
RNU6-553P-201ENST00000364047 WNT7AO00755 349 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms