RNA–Protein interactions for RNA: ENST00000364007.1

RNU6-560P-201, Transcript of RNA, U6 small nuclear 560, pseudogene, humanhuman

BASIC

Gene RNU6-560P, Length 108 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-560P-201ENST00000364007 BLOC1S3Q6QNY0 202 aa8.93□□□□□ -0.98
RNU6-560P-201ENST00000364007 NUTM2AQ8IVF1 878 aaPredicted RBP8.93□□□□□ -0.98
RNU6-560P-201ENST00000364007 SCUBE3Q8IX30 993 aa8.92□□□□□ -0.98
RNU6-560P-201ENST00000364007 C6orf229H3BNL8 230 aa8.91□□□□□ -0.98
RNU6-560P-201ENST00000364007 PRPF38BQ5VTL8 546 aaKnown RBP8.91□□□□□ -0.98
RNU6-560P-201ENST00000364007 ZBTB3Q9H5J0 574 aa8.91□□□□□ -0.98
RNU6-560P-201ENST00000364007 COPS2P61201 443 aa8.9□□□□□ -0.98
RNU6-560P-201ENST00000364007 MTMR2Q13614 643 aa8.9□□□□□ -0.98
RNU6-560P-201ENST00000364007 RNF19BQ6ZMZ0 732 aa8.89□□□□□ -0.99
RNU6-560P-201ENST00000364007 C14orf37Q86TY3 774 aa8.88□□□□□ -0.99
RNU6-560P-201ENST00000364007 RNF166Q96A37 237 aaPredicted RBP8.88□□□□□ -0.99
RNU6-560P-201ENST00000364007 CFAP99D6REC4 459 aa8.87□□□□□ -0.99
RNU6-560P-201ENST00000364007 NR1I2O75469 434 aa8.87□□□□□ -0.99
RNU6-560P-201ENST00000364007 BRICD5Q6PL45 260 aa8.87□□□□□ -0.99
RNU6-560P-201ENST00000364007 THAP11Q96EK4 314 aa8.87□□□□□ -0.99
RNU6-560P-201ENST00000364007 SNRKQ9NRH2 765 aa8.87□□□□□ -0.99
RNU6-560P-201ENST00000364007 AP1G2O75843 785 aa8.86□□□□□ -0.99
RNU6-560P-201ENST00000364007 Q3C1V9 767 aa8.86□□□□□ -0.99
RNU6-560P-201ENST00000364007 TMEM259Q4ZIN3 620 aa8.86□□□□□ -0.99
RNU6-560P-201ENST00000364007 NYAP1Q6ZVC0 841 aa8.86□□□□□ -0.99
RNU6-560P-201ENST00000364007 PRR7Q8TB68 274 aa8.86□□□□□ -0.99
RNU6-560P-201ENST00000364007 TSC1Q92574 1164 aa8.86□□□□□ -0.99
RNU6-560P-201ENST00000364007 ZNF516Q92618 1163 aa8.86□□□□□ -0.99
RNU6-560P-201ENST00000364007 MTRQ99707 1265 aa8.86□□□□□ -0.99
RNU6-560P-201ENST00000364007 CTDSPL2Q05D32 466 aa8.85□□□□□ -0.99
RNU6-560P-201ENST00000364007 TJAP1Q5JTD0 557 aa8.85□□□□□ -0.99
RNU6-560P-201ENST00000364007 SPDYE5A6NIY4 337 aa8.84□□□□□ -0.99
RNU6-560P-201ENST00000364007 FMNL1O95466 1100 aaPredicted RBP8.84□□□□□ -0.99
RNU6-560P-201ENST00000364007 FLIIQ13045 1269 aa8.84□□□□□ -0.99
RNU6-560P-201ENST00000364007 RETREG3Q86VR2 466 aa8.84□□□□□ -0.99
RNU6-560P-201ENST00000364007 SALL2Q9Y467 1007 aaPredicted RBP8.84□□□□□ -0.99
RNU6-560P-201ENST00000364007 TLL1O43897 1013 aa8.83□□□□□ -1
RNU6-560P-201ENST00000364007 ZPR1O75312 459 aa8.83□□□□□ -1
RNU6-560P-201ENST00000364007 MCM6Q14566 821 aa8.83□□□□□ -1
RNU6-560P-201ENST00000364007 BANK1Q8NDB2 785 aa8.83□□□□□ -1
RNU6-560P-201ENST00000364007 USB1Q9BQ65 265 aaKnown RBP8.83□□□□□ -1
RNU6-560P-201ENST00000364007 MMRN1Q13201 1228 aa8.82□□□□□ -1
RNU6-560P-201ENST00000364007 FAM160A2Q8N612 972 aaPredicted RBP8.82□□□□□ -1
RNU6-560P-201ENST00000364007 SPSB2Q99619 263 aa8.82□□□□□ -1
RNU6-560P-201ENST00000364007 HCSTQ9UBK5 93 aa8.82□□□□□ -1
RNU6-560P-201ENST00000364007 PER1O15534 1290 aaPredicted RBP8.81□□□□□ -1
RNU6-560P-201ENST00000364007 USP17L8P0C7I0 530 aa8.81□□□□□ -1
RNU6-560P-201ENST00000364007 LRRN4Q8WUT4 740 aa8.81□□□□□ -1
RNU6-560P-201ENST00000364007 IL21Q9HBE4 155 aa8.81□□□□□ -1
RNU6-560P-201ENST00000364007 NKX2-3Q8TAU0 364 aa8.8□□□□□ -1
RNU6-560P-201ENST00000364007 MTMR14Q8NCE2 650 aa8.79□□□□□ -1
RNU6-560P-201ENST00000364007 HELBQ8NG08 1087 aaPredicted RBP8.79□□□□□ -1
RNU6-560P-201ENST00000364007 ERICH6Q7L0X2 663 aa8.78□□□□□ -1
RNU6-560P-201ENST00000364007 CLUAP1Q96AJ1 413 aa8.78□□□□□ -1
RNU6-560P-201ENST00000364007 POM121Q96HA1 1249 aa8.78□□□□□ -1
RNU6-560P-201ENST00000364007 HMX1Q9NP08 348 aaPredicted RBP8.78□□□□□ -1
RNU6-560P-201ENST00000364007 PRDM9Q9NQV7 894 aa8.78□□□□□ -1
RNU6-560P-201ENST00000364007 ADH1BP00325 375 aa8.77□□□□□ -1.01
RNU6-560P-201ENST00000364007 UBTFP17480 764 aaKnown RBP8.77□□□□□ -1.01
RNU6-560P-201ENST00000364007 ZMYND15Q9H091 742 aa8.77□□□□□ -1.01
RNU6-560P-201ENST00000364007 MSS51Q4VC12 460 aa8.76□□□□□ -1.01
RNU6-560P-201ENST00000364007 DESI1Q6ICB0 168 aa8.76□□□□□ -1.01
RNU6-560P-201ENST00000364007 LYPD8Q6UX82 237 aa8.76□□□□□ -1.01
RNU6-560P-201ENST00000364007 EPS8L1Q8TE68 723 aa8.76□□□□□ -1.01
RNU6-560P-201ENST00000364007 JUNDP17535 347 aa8.75□□□□□ -1.01
RNU6-560P-201ENST00000364007 GJD4Q96KN9 370 aaPredicted RBP8.75□□□□□ -1.01
RNU6-560P-201ENST00000364007 COG6Q9Y2V7 657 aa8.74□□□□□ -1.01
RNU6-560P-201ENST00000364007 DXOO77932 396 aaKnown RBP8.73□□□□□ -1.01
RNU6-560P-201ENST00000364007 MMP16P51512 607 aa8.73□□□□□ -1.01
RNU6-560P-201ENST00000364007 KCNC4Q03721 635 aa8.73□□□□□ -1.01
RNU6-560P-201ENST00000364007 NR6A1Q15406 480 aa8.73□□□□□ -1.01
RNU6-560P-201ENST00000364007 TRIM34Q9BYJ4 488 aa8.73□□□□□ -1.01
RNU6-560P-201ENST00000364007 SLC6A16Q9GZN6 736 aa8.73□□□□□ -1.01
RNU6-560P-201ENST00000364007 ITGBL1O95965 494 aaPredicted RBP8.72□□□□□ -1.01
RNU6-560P-201ENST00000364007 GDPD2Q9HCC8 539 aa8.72□□□□□ -1.01
RNU6-560P-201ENST00000364007 S1PR4O95977 384 aa8.71□□□□□ -1.02
RNU6-560P-201ENST00000364007 TBC1D2BQ9UPU7 963 aa8.71□□□□□ -1.02
RNU6-560P-201ENST00000364007 PPEF1O14829 653 aaPredicted RBP8.7□□□□□ -1.02
RNU6-560P-201ENST00000364007 PTPRNQ16849 979 aa8.7□□□□□ -1.02
RNU6-560P-201ENST00000364007 MAP10Q9P2G4 905 aa8.7□□□□□ -1.02
RNU6-560P-201ENST00000364007 A6NJR5 290 aa8.69□□□□□ -1.02
RNU6-560P-201ENST00000364007 SUPT5HO00267 1087 aaKnown RBP8.69□□□□□ -1.02
RNU6-560P-201ENST00000364007 SOCS7O14512 581 aa8.69□□□□□ -1.02
RNU6-560P-201ENST00000364007 RAD21O60216 631 aa8.69□□□□□ -1.02
RNU6-560P-201ENST00000364007 F12P00748 615 aaPredicted RBP8.69□□□□□ -1.02
RNU6-560P-201ENST00000364007 NUDT12Q9BQG2 462 aa8.69□□□□□ -1.02
RNU6-560P-201ENST00000364007 CTHP32929 405 aa8.68□□□□□ -1.02
RNU6-560P-201ENST00000364007 CCDC24Q8N4L8 307 aa8.68□□□□□ -1.02
RNU6-560P-201ENST00000364007 EVA1BQ9NVM1 165 aa8.68□□□□□ -1.02
RNU6-560P-201ENST00000364007 GPR37L1O60883 481 aa8.67□□□□□ -1.02
RNU6-560P-201ENST00000364007 CCNYL3P0C7X3 344 aa8.67□□□□□ -1.02
RNU6-560P-201ENST00000364007 ABL2P42684 1182 aa8.67□□□□□ -1.02
RNU6-560P-201ENST00000364007 KCNH2Q12809 1159 aa8.66□□□□□ -1.02
RNU6-560P-201ENST00000364007 PTCRAQ6ISU1 281 aaPredicted RBP8.66□□□□□ -1.02
RNU6-560P-201ENST00000364007 PROSER2Q86WR7 435 aaPredicted RBP8.66□□□□□ -1.02
RNU6-560P-201ENST00000364007 FNBP4Q8N3X1 1017 aaPredicted RBP8.66□□□□□ -1.02
RNU6-560P-201ENST00000364007 NDUFB9Q9Y6M9 179 aa8.66□□□□□ -1.02
RNU6-560P-201ENST00000364007 APBB1O00213 710 aa8.65□□□□□ -1.02
RNU6-560P-201ENST00000364007 TRAK2O60296 914 aa8.65□□□□□ -1.02
RNU6-560P-201ENST00000364007 IRF5Q13568 498 aa8.65□□□□□ -1.02
RNU6-560P-201ENST00000364007 PRM3Q9NNZ6 103 aa8.65□□□□□ -1.02
RNU6-560P-201ENST00000364007 FCF1Q9Y324 198 aaKnown RBP8.65□□□□□ -1.02
RNU6-560P-201ENST00000364007 RNF223E7ERA6 249 aa8.64□□□□□ -1.03
RNU6-560P-201ENST00000364007 PPP1R18Q6NYC8 613 aa8.64□□□□□ -1.03
RNU6-560P-201ENST00000364007 ARID3CA6NKF2 412 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms