RNA–Protein interactions for RNA: ENST00000363574.1

RNU6-1339P-201, Transcript of RNA, U6 small nuclear 1339, pseudogene, humanhuman

BASIC

Gene RNU6-1339P, Length 91 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1339P-201ENST00000363574 CCDC9Q9Y3X0 531 aaKnown RBP8.17□□□□□ -1.1
RNU6-1339P-201ENST00000363574 C6orf229H3BNL8 230 aa8.16□□□□□ -1.1
RNU6-1339P-201ENST00000363574 HDGFP51858 240 aaKnown RBP8.16□□□□□ -1.1
RNU6-1339P-201ENST00000363574 DMRTA1Q5VZB9 504 aa8.16□□□□□ -1.1
RNU6-1339P-201ENST00000363574 SLF2Q8IX21 1173 aa8.16□□□□□ -1.1
RNU6-1339P-201ENST00000363574 TSC1Q92574 1164 aa8.16□□□□□ -1.1
RNU6-1339P-201ENST00000363574 CFHP08603 1231 aa8.15□□□□□ -1.1
RNU6-1339P-201ENST00000363574 VAC14Q08AM6 782 aa8.15□□□□□ -1.1
RNU6-1339P-201ENST00000363574 GRIPAP1Q4V328 841 aa8.15□□□□□ -1.1
RNU6-1339P-201ENST00000363574 AEBP1Q8IUX7 1158 aa8.15□□□□□ -1.1
RNU6-1339P-201ENST00000363574 EPS8L1Q8TE68 723 aa8.15□□□□□ -1.1
RNU6-1339P-201ENST00000363574 ACIN1Q9UKV3 1341 aaKnown RBP8.14□□□□□ -1.11
RNU6-1339P-201ENST00000363574 SLC4A3P48751 1232 aa8.14□□□□□ -1.11
RNU6-1339P-201ENST00000363574 VARS2Q5ST30 1063 aaKnown RBP8.14□□□□□ -1.11
RNU6-1339P-201ENST00000363574 CFAP70Q5T0N1 1121 aa8.14□□□□□ -1.11
RNU6-1339P-201ENST00000363574 SAMD7Q7Z3H4 446 aa8.14□□□□□ -1.11
RNU6-1339P-201ENST00000363574 PBXIP1Q96AQ6 731 aa8.14□□□□□ -1.11
RNU6-1339P-201ENST00000363574 AXIN2Q9Y2T1 843 aa8.14□□□□□ -1.11
RNU6-1339P-201ENST00000363574 ATP6V1AP38606 617 aa8.13□□□□□ -1.11
RNU6-1339P-201ENST00000363574 RANGAP1P46060 587 aaPredicted RBP8.13□□□□□ -1.11
RNU6-1339P-201ENST00000363574 NPM2Q86SE8 214 aaKnown RBP8.13□□□□□ -1.11
RNU6-1339P-201ENST00000363574 SYMPKQ92797 1274 aaKnown RBP8.13□□□□□ -1.11
RNU6-1339P-201ENST00000363574 ALG2Q9H553 416 aa8.13□□□□□ -1.11
RNU6-1339P-201ENST00000363574 VPS9D1Q9Y2B5 631 aa8.13□□□□□ -1.11
RNU6-1339P-201ENST00000363574 PRR7Q8TB68 274 aa8.12□□□□□ -1.11
RNU6-1339P-201ENST00000363574 ERBB3P21860 1342 aa8.11□□□□□ -1.11
RNU6-1339P-201ENST00000363574 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.11□□□□□ -1.11
RNU6-1339P-201ENST00000363574 RFX1P22670 979 aa8.11□□□□□ -1.11
RNU6-1339P-201ENST00000363574 SRPK2P78362 688 aaKnown RBP8.11□□□□□ -1.11
RNU6-1339P-201ENST00000363574 LAPTM4BQ86VI4 370 aa8.11□□□□□ -1.11
RNU6-1339P-201ENST00000363574 PPP1R12CQ9BZL4 782 aa8.11□□□□□ -1.11
RNU6-1339P-201ENST00000363574 PER1O15534 1290 aaPredicted RBP8.1□□□□□ -1.11
RNU6-1339P-201ENST00000363574 PBX2P40425 430 aa8.1□□□□□ -1.11
RNU6-1339P-201ENST00000363574 NR6A1Q15406 480 aa8.1□□□□□ -1.11
RNU6-1339P-201ENST00000363574 BHMG1C9JSJ3 638 aaPredicted RBP8.09□□□□□ -1.11
RNU6-1339P-201ENST00000363574 RNF40O75150 1001 aa8.09□□□□□ -1.11
RNU6-1339P-201ENST00000363574 OTUD5Q96G74 571 aa8.09□□□□□ -1.11
RNU6-1339P-201ENST00000363574 PALM3A6NDB9 673 aaPredicted RBP8.08□□□□□ -1.12
RNU6-1339P-201ENST00000363574 PDE4CQ08493 712 aa8.08□□□□□ -1.12
RNU6-1339P-201ENST00000363574 KMT5BQ4FZB7 885 aa8.08□□□□□ -1.12
RNU6-1339P-201ENST00000363574 MORN1Q5T089 497 aa8.08□□□□□ -1.12
RNU6-1339P-201ENST00000363574 RETREG3Q86VR2 466 aa8.08□□□□□ -1.12
RNU6-1339P-201ENST00000363574 UCN2Q96RP3 112 aa8.08□□□□□ -1.12
RNU6-1339P-201ENST00000363574 NBPF3Q9H094 633 aa8.08□□□□□ -1.12
RNU6-1339P-201ENST00000363574 ACTN4O43707 911 aaKnown RBP8.07□□□□□ -1.12
RNU6-1339P-201ENST00000363574 SOX11P35716 441 aa8.07□□□□□ -1.12
RNU6-1339P-201ENST00000363574 ZFRQ96KR1 1074 aaKnown RBP8.07□□□□□ -1.12
RNU6-1339P-201ENST00000363574 SLC27A5Q9Y2P5 690 aa8.07□□□□□ -1.12
RNU6-1339P-201ENST00000363574 PUS10Q3MIT2 529 aaKnown RBP8.06□□□□□ -1.12
RNU6-1339P-201ENST00000363574 DESI1Q6ICB0 168 aa8.06□□□□□ -1.12
RNU6-1339P-201ENST00000363574 USTQ9Y2C2 406 aa8.06□□□□□ -1.12
RNU6-1339P-201ENST00000363574 LMOD1P29536 600 aaPredicted RBP8.05□□□□□ -1.12
RNU6-1339P-201ENST00000363574 Q3C1V9 767 aa8.05□□□□□ -1.12
RNU6-1339P-201ENST00000363574 ZNF687Q8N1G0 1237 aa8.05□□□□□ -1.12
RNU6-1339P-201ENST00000363574 TFIP11Q9UBB9 837 aaKnown RBP8.05□□□□□ -1.12
RNU6-1339P-201ENST00000363574 GZF1Q9H116 711 aaPredicted RBP8.04□□□□□ -1.12
RNU6-1339P-201ENST00000363574 TK2O00142 265 aa8.03□□□□□ -1.12
RNU6-1339P-201ENST00000363574 CSB-PGBD3P0DP91 1061 aa8.03□□□□□ -1.12
RNU6-1339P-201ENST00000363574 EMP3P54852 163 aa8.03□□□□□ -1.12
RNU6-1339P-201ENST00000363574 SEMA3FQ13275 785 aa8.03□□□□□ -1.12
RNU6-1339P-201ENST00000363574 LYPD8Q6UX82 237 aa8.03□□□□□ -1.12
RNU6-1339P-201ENST00000363574 ST18O60284 1047 aa8.02□□□□□ -1.13
RNU6-1339P-201ENST00000363574 RNF19BQ6ZMZ0 732 aa8.02□□□□□ -1.13
RNU6-1339P-201ENST00000363574 MRPL50Q8N5N7 158 aaKnown RBP8.02□□□□□ -1.13
RNU6-1339P-201ENST00000363574 PNMA1Q8ND90 353 aa8.02□□□□□ -1.13
RNU6-1339P-201ENST00000363574 LRCH3Q96II8 777 aa8.02□□□□□ -1.13
RNU6-1339P-201ENST00000363574 MAFBQ9Y5Q3 323 aaPredicted RBP8.02□□□□□ -1.13
RNU6-1339P-201ENST00000363574 CARNS1A5YM72 827 aa8.01□□□□□ -1.13
RNU6-1339P-201ENST00000363574 BRD1O95696 1058 aa8.01□□□□□ -1.13
RNU6-1339P-201ENST00000363574 EIF4G2P78344 907 aaKnown RBP eCLIP8.01□□□□□ -1.13
RNU6-1339P-201ENST00000363574 NR1H3Q13133 447 aa8.01□□□□□ -1.13
RNU6-1339P-201ENST00000363574 TMCO4Q5TGY1 634 aa8.01□□□□□ -1.13
RNU6-1339P-201ENST00000363574 BLOC1S3Q6QNY0 202 aa8.01□□□□□ -1.13
RNU6-1339P-201ENST00000363574 TBC1D9Q6ZT07 1266 aa8.01□□□□□ -1.13
RNU6-1339P-201ENST00000363574 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.01□□□□□ -1.13
RNU6-1339P-201ENST00000363574 ATG7O95352 703 aa8□□□□□ -1.13
RNU6-1339P-201ENST00000363574 KCNA1Q09470 495 aa8□□□□□ -1.13
RNU6-1339P-201ENST00000363574 BRICD5Q6PL45 260 aa8□□□□□ -1.13
RNU6-1339P-201ENST00000363574 MARVELD3Q96A59 401 aa8□□□□□ -1.13
RNU6-1339P-201ENST00000363574 USB1Q9BQ65 265 aaKnown RBP8□□□□□ -1.13
RNU6-1339P-201ENST00000363574 PRR14Q9BWN1 585 aa8□□□□□ -1.13
RNU6-1339P-201ENST00000363574 FAM205CA6NFA0 338 aa7.99□□□□□ -1.13
RNU6-1339P-201ENST00000363574 PATL2C9JE40 543 aaKnown RBP7.99□□□□□ -1.13
RNU6-1339P-201ENST00000363574 FBXO45P0C2W1 286 aa7.99□□□□□ -1.13
RNU6-1339P-201ENST00000363574 CDCA8Q53HL2 280 aa7.99□□□□□ -1.13
RNU6-1339P-201ENST00000363574 SALL2Q9Y467 1007 aaPredicted RBP7.99□□□□□ -1.13
RNU6-1339P-201ENST00000363574 ZBBXA8MT70 800 aa7.98□□□□□ -1.13
RNU6-1339P-201ENST00000363574 ATP9BO43861 1147 aa7.98□□□□□ -1.13
RNU6-1339P-201ENST00000363574 F12P00748 615 aaPredicted RBP7.98□□□□□ -1.13
RNU6-1339P-201ENST00000363574 ADGRD1Q6QNK2 874 aa7.98□□□□□ -1.13
RNU6-1339P-201ENST00000363574 RGS22Q8NE09 1264 aa7.98□□□□□ -1.13
RNU6-1339P-201ENST00000363574 FKBPLQ9UIM3 349 aa7.98□□□□□ -1.13
RNU6-1339P-201ENST00000363574 TMEM88BA6NKF7 163 aa7.97□□□□□ -1.13
RNU6-1339P-201ENST00000363574 HRO43593 1189 aa7.97□□□□□ -1.13
RNU6-1339P-201ENST00000363574 MFAP1P55081 439 aaKnown RBP7.97□□□□□ -1.13
RNU6-1339P-201ENST00000363574 THAP11Q96EK4 314 aa7.97□□□□□ -1.13
RNU6-1339P-201ENST00000363574 POTEB3A0JP26 581 aa7.96□□□□□ -1.14
RNU6-1339P-201ENST00000363574 APLP1P51693 650 aa7.96□□□□□ -1.14
RNU6-1339P-201ENST00000363574 POTEBQ6S5H4 581 aa7.96□□□□□ -1.14
RNU6-1339P-201ENST00000363574 MAP10Q9P2G4 905 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms