RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 FAM177BA6PVY3 158 aa22.82■■□□□ 1.24
CLIP2-202ENST00000361545 SYNE3Q6ZMZ3 975 aa22.82■■□□□ 1.24
CLIP2-202ENST00000361545 TCP11L2Q8N4U5 519 aa22.82■■□□□ 1.24
CLIP2-202ENST00000361545 CNTLNQ9NXG0 1405 aa22.82■■□□□ 1.24
CLIP2-202ENST00000361545 ROCK1Q13464 1354 aa22.81■■□□□ 1.24
CLIP2-202ENST00000361545 RBM42Q9BTD8 480 aaKnown RBP22.81■■□□□ 1.24
CLIP2-202ENST00000361545 DNMBPQ6XZF7 1577 aa22.81■■□□□ 1.24
CLIP2-202ENST00000361545 PDE4AP27815 886 aa22.8■■□□□ 1.24
CLIP2-202ENST00000361545 NEUROD6Q96NK8 337 aa22.8■■□□□ 1.24
CLIP2-202ENST00000361545 RBM33Q96EV2 1170 aaKnown RBP22.8■■□□□ 1.24
CLIP2-202ENST00000361545 TSHZ2Q9NRE2 1034 aa22.79■■□□□ 1.24
CLIP2-202ENST00000361545 SLC4A3P48751 1232 aa22.79■■□□□ 1.24
CLIP2-202ENST00000361545 PLEKHO1Q53GL0 409 aaPredicted RBP22.79■■□□□ 1.24
CLIP2-202ENST00000361545 GAS2L2Q8NHY3 880 aa22.79■■□□□ 1.24
CLIP2-202ENST00000361545 PANK1Q8TE04 598 aa22.79■■□□□ 1.24
CLIP2-202ENST00000361545 KIAA1107Q9UPP5 1409 aa22.78■■□□□ 1.24
CLIP2-202ENST00000361545 ZKSCAN1P17029 563 aaPredicted RBP22.78■■□□□ 1.24
CLIP2-202ENST00000361545 PPP2R1AP30153 589 aa22.78■■□□□ 1.24
CLIP2-202ENST00000361545 MCTP1Q6DN14 999 aa22.77■■□□□ 1.24
CLIP2-202ENST00000361545 LNPKQ9C0E8 428 aa22.77■■□□□ 1.24
CLIP2-202ENST00000361545 ANO2Q9NQ90 1003 aa22.76■■□□□ 1.23
CLIP2-202ENST00000361545 HECW1Q76N89 1606 aa22.76■■□□□ 1.23
CLIP2-202ENST00000361545 UBTFL1P0CB47 393 aaPredicted RBP22.76■■□□□ 1.23
CLIP2-202ENST00000361545 REC8O95072 547 aa22.76■■□□□ 1.23
CLIP2-202ENST00000361545 XPCQ01831 940 aaPredicted RBP22.76■■□□□ 1.23
CLIP2-202ENST00000361545 NBPF8Q3BBV2 869 aa22.76■■□□□ 1.23
CLIP2-202ENST00000361545 DHX16O60231 1041 aaKnown RBP22.75■■□□□ 1.23
CLIP2-202ENST00000361545 CDK13Q14004 1512 aaKnown RBP22.75■■□□□ 1.23
CLIP2-202ENST00000361545 KIAA0586Q9BVV6 1533 aa22.75■■□□□ 1.23
CLIP2-202ENST00000361545 TOM1L2Q6ZVM7 507 aa22.75■■□□□ 1.23
CLIP2-202ENST00000361545 PIP4K2BP78356 416 aa22.74■■□□□ 1.23
CLIP2-202ENST00000361545 SULT6B1Q6IMI4 303 aa22.74■■□□□ 1.23
CLIP2-202ENST00000361545 POGZQ7Z3K3 1410 aa22.74■■□□□ 1.23
CLIP2-202ENST00000361545 TATP17735 454 aaPredicted RBP22.74■■□□□ 1.23
CLIP2-202ENST00000361545 ERBINQ96RT1 1412 aa22.74■■□□□ 1.23
CLIP2-202ENST00000361545 CPLX2Q6PUV4 134 aaKnown RBP22.74■■□□□ 1.23
CLIP2-202ENST00000361545 DDX54Q8TDD1 881 aaKnown RBP22.74■■□□□ 1.23
CLIP2-202ENST00000361545 HSP90AB4PQ58FF6 505 aa22.73■■□□□ 1.23
CLIP2-202ENST00000361545 CTDP1Q9Y5B0 961 aaPredicted RBP22.73■■□□□ 1.23
CLIP2-202ENST00000361545 ZNF692Q9BU19 519 aaPredicted RBP22.72■■□□□ 1.23
CLIP2-202ENST00000361545 TRDNQ13061 729 aa22.72■■□□□ 1.23
CLIP2-202ENST00000361545 RTEL1-TNFRSF6BF6WH68 1400 aa22.72■■□□□ 1.23
CLIP2-202ENST00000361545 DAPK1P53355 1430 aa22.72■■□□□ 1.23
CLIP2-202ENST00000361545 SMG6Q86US8 1419 aaKnown RBP22.71■■□□□ 1.23
CLIP2-202ENST00000361545 GOLGA6L3A6NEY3 463 aa22.71■■□□□ 1.23
CLIP2-202ENST00000361545 CPLX1O14810 134 aa22.71■■□□□ 1.23
CLIP2-202ENST00000361545 CCDC30Q5VVM6 783 aa22.71■■□□□ 1.23
CLIP2-202ENST00000361545 BRD4O60885 1362 aaPredicted RBP22.7■■□□□ 1.22
CLIP2-202ENST00000361545 PDE4CQ08493 712 aa22.7■■□□□ 1.22
CLIP2-202ENST00000361545 CDCA7LQ96GN5 454 aa22.7■■□□□ 1.22
CLIP2-202ENST00000361545 CHMP4CQ96CF2 233 aa22.7■■□□□ 1.22
CLIP2-202ENST00000361545 PES1O00541 588 aaKnown RBP22.69■■□□□ 1.22
CLIP2-202ENST00000361545 FYB1O15117 783 aa22.69■■□□□ 1.22
CLIP2-202ENST00000361545 SAMD1Q6SPF0 538 aaPredicted RBP22.69■■□□□ 1.22
CLIP2-202ENST00000361545 EXOSC9Q06265 439 aaKnown RBP22.69■■□□□ 1.22
CLIP2-202ENST00000361545 WASHC4Q2M389 1173 aa22.69■■□□□ 1.22
CLIP2-202ENST00000361545 ARHGEF11O15085 1522 aa22.68■■□□□ 1.22
CLIP2-202ENST00000361545 ERC2O15083 957 aa22.68■■□□□ 1.22
CLIP2-202ENST00000361545 CCDC27Q2M243 656 aa22.68■■□□□ 1.22
CLIP2-202ENST00000361545 PRDM11Q9NQV5 511 aa22.68■■□□□ 1.22
CLIP2-202ENST00000361545 ZNF428Q96B54 188 aa22.68■■□□□ 1.22
CLIP2-202ENST00000361545 NFXL1Q6ZNB6 911 aa22.68■■□□□ 1.22
CLIP2-202ENST00000361545 RNF20Q5VTR2 975 aa22.67■■□□□ 1.22
CLIP2-202ENST00000361545 TRIM29Q14134 588 aa22.67■■□□□ 1.22
CLIP2-202ENST00000361545 CD109Q6YHK3 1445 aa22.67■■□□□ 1.22
CLIP2-202ENST00000361545 EPRSP07814 1512 aaKnown RBP22.66■■□□□ 1.22
CLIP2-202ENST00000361545 ZNF530Q6P9A1 599 aaPredicted RBP22.66■■□□□ 1.22
CLIP2-202ENST00000361545 TWISTNBQ3B726 338 aaPredicted RBP22.66■■□□□ 1.22
CLIP2-202ENST00000361545 RRS1Q15050 365 aaKnown RBP22.66■■□□□ 1.22
CLIP2-202ENST00000361545 KIF6Q6ZMV9 814 aa22.66■■□□□ 1.22
CLIP2-202ENST00000361545 ATP6V1DQ9Y5K8 247 aa22.66■■□□□ 1.22
CLIP2-202ENST00000361545 TSR2Q969E8 191 aaKnown RBP22.65■■□□□ 1.22
CLIP2-202ENST00000361545 CABP4P57796 275 aa22.65■■□□□ 1.22
CLIP2-202ENST00000361545 TCEAL9Q9UHQ7 104 aa22.65■■□□□ 1.22
CLIP2-202ENST00000361545 TIAM1Q13009 1591 aa22.64■■□□□ 1.21
CLIP2-202ENST00000361545 RPGRIP1LQ68CZ1 1315 aa22.64■■□□□ 1.21
CLIP2-202ENST00000361545 PHF14O94880 888 aa22.64■■□□□ 1.21
CLIP2-202ENST00000361545 SURF6O75683 361 aaKnown RBP22.64■■□□□ 1.21
CLIP2-202ENST00000361545 TPD52L1Q16890 204 aaPredicted RBP22.64■■□□□ 1.21
CLIP2-202ENST00000361545 ERICH2A1L162 156 aa22.63■■□□□ 1.21
CLIP2-202ENST00000361545 ZC3H6P61129 1189 aaKnown RBP22.63■■□□□ 1.21
CLIP2-202ENST00000361545 DDX49Q9Y6V7 483 aaKnown RBP22.63■■□□□ 1.21
CLIP2-202ENST00000361545 ABCA10Q8WWZ4 1543 aa22.63■■□□□ 1.21
CLIP2-202ENST00000361545 INTS3Q68E01 1043 aaKnown RBP22.63■■□□□ 1.21
CLIP2-202ENST00000361545 PLB1Q6P1J6 1458 aa22.63■■□□□ 1.21
CLIP2-202ENST00000361545 NOC3LQ8WTT2 800 aaKnown RBP22.62■■□□□ 1.21
CLIP2-202ENST00000361545 HDGFL1Q5TGJ6 251 aa22.62■■□□□ 1.21
CLIP2-202ENST00000361545 PPP1R1BQ9UD71 204 aaPredicted RBP22.62■■□□□ 1.21
CLIP2-202ENST00000361545 IQGAP2Q13576 1575 aa22.61■■□□□ 1.21
CLIP2-202ENST00000361545 GNAI3P08754 354 aa22.61■■□□□ 1.21
CLIP2-202ENST00000361545 ANKRD30BQ9BXX2 1392 aa22.61■■□□□ 1.21
CLIP2-202ENST00000361545 SLC4A2P04920 1241 aa22.6■■□□□ 1.21
CLIP2-202ENST00000361545 MAGI1Q96QZ7 1491 aaPredicted RBP22.6■■□□□ 1.21
CLIP2-202ENST00000361545 WAPLQ7Z5K2 1190 aa22.6■■□□□ 1.21
CLIP2-202ENST00000361545 DDX11L8A8MPP1 907 aa22.6■■□□□ 1.21
CLIP2-202ENST00000361545 FOSBP53539 338 aa22.6■■□□□ 1.21
CLIP2-202ENST00000361545 LAMC3Q9Y6N6 1575 aa22.59■■□□□ 1.21
CLIP2-202ENST00000361545 CLASRPQ8N2M8 674 aaKnown RBP22.59■■□□□ 1.21
CLIP2-202ENST00000361545 C1orf115Q9H7X2 142 aa22.59■■□□□ 1.21
CLIP2-202ENST00000361545 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.59■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms