RNA–Protein interactions for RNA: ENST00000361371.9

LTN1-201, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LTN1, Length 7,685 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-201ENST00000361371 NLRP13Q86W25 1043 aa3.89□□□□□ -1.79
LTN1-201ENST00000361371 EMILIN1Q9Y6C2 1016 aa3.89□□□□□ -1.79
LTN1-201ENST00000361371 MTHFSP49914 203 aa3.89□□□□□ -1.79
LTN1-201ENST00000361371 SPINK5Q9NQ38 1064 aaPredicted RBP3.89□□□□□ -1.79
LTN1-201ENST00000361371 ANKLE2Q86XL3 938 aa3.88□□□□□ -1.79
LTN1-201ENST00000361371 ORAI2Q96SN7 254 aa3.88□□□□□ -1.79
LTN1-201ENST00000361371 NSD3Q9BZ95 1437 aa3.88□□□□□ -1.79
LTN1-201ENST00000361371 CFAP74Q9C0B2 1584 aa3.88□□□□□ -1.79
LTN1-201ENST00000361371 REREQ9P2R6 1566 aa3.88□□□□□ -1.79
LTN1-201ENST00000361371 NEUROD2Q15784 382 aa3.88□□□□□ -1.79
LTN1-201ENST00000361371 MROH2AA6NES4 1674 aa3.88□□□□□ -1.79
LTN1-201ENST00000361371 KTN1Q86UP2 1357 aaKnown RBP3.88□□□□□ -1.79
LTN1-201ENST00000361371 PPM1GO15355 546 aaPredicted RBP3.88□□□□□ -1.79
LTN1-201ENST00000361371 MORC1Q86VD1 984 aa3.88□□□□□ -1.79
LTN1-201ENST00000361371 RRP7AQ9Y3A4 280 aaKnown RBP3.88□□□□□ -1.79
LTN1-201ENST00000361371 SBNO2Q9Y2G9 1366 aa3.88□□□□□ -1.79
LTN1-201ENST00000361371 TULP4Q9NRJ4 1543 aa3.88□□□□□ -1.79
LTN1-201ENST00000361371 TRPM1Q7Z4N2 1603 aa3.88□□□□□ -1.79
LTN1-201ENST00000361371 EIF3AQ14152 1382 aaKnown RBP3.87□□□□□ -1.79
LTN1-201ENST00000361371 PLEKHG1Q9ULL1 1385 aa3.87□□□□□ -1.79
LTN1-201ENST00000361371 RALBP1Q15311 655 aa3.87□□□□□ -1.79
LTN1-201ENST00000361371 CDCA8Q53HL2 280 aa3.87□□□□□ -1.79
LTN1-201ENST00000361371 ACEP12821 1306 aa3.87□□□□□ -1.79
LTN1-201ENST00000361371 CAMSAP1Q5T5Y3 1602 aa3.87□□□□□ -1.79
LTN1-201ENST00000361371 APAF1O14727 1248 aa3.87□□□□□ -1.79
LTN1-201ENST00000361371 RRS1Q15050 365 aaKnown RBP3.87□□□□□ -1.79
LTN1-201ENST00000361371 SUPT16HQ9Y5B9 1047 aaKnown RBP3.87□□□□□ -1.79
LTN1-201ENST00000361371 CCDC61Q9Y6R9 512 aa3.87□□□□□ -1.79
LTN1-201ENST00000361371 ALKQ9UM73 1620 aa3.87□□□□□ -1.79
LTN1-201ENST00000361371 TMEM131LA2VDJ0 1609 aa3.87□□□□□ -1.79
LTN1-201ENST00000361371 HDGFP51858 240 aaKnown RBP3.87□□□□□ -1.79
LTN1-201ENST00000361371 MED14O60244 1454 aa3.87□□□□□ -1.79
LTN1-201ENST00000361371 ZNF335Q9H4Z2 1342 aaPredicted RBP3.87□□□□□ -1.79
LTN1-201ENST00000361371 FOXO3O43524 673 aa3.86□□□□□ -1.79
LTN1-201ENST00000361371 ARHGAP23Q9P227 1491 aa3.86□□□□□ -1.79
LTN1-201ENST00000361371 PROSER2Q86WR7 435 aaPredicted RBP3.86□□□□□ -1.79
LTN1-201ENST00000361371 POLKQ9UBT6 870 aa3.86□□□□□ -1.79
LTN1-201ENST00000361371 CD163L1Q9NR16 1453 aa3.86□□□□□ -1.79
LTN1-201ENST00000361371 CLTCQ00610 1675 aaKnown RBP3.85□□□□□ -1.79
LTN1-201ENST00000361371 FKBP8Q14318 412 aa3.85□□□□□ -1.79
LTN1-201ENST00000361371 NLRP1Q9C000 1473 aa3.85□□□□□ -1.79
LTN1-201ENST00000361371 SIRT1Q96EB6 747 aa3.85□□□□□ -1.79
LTN1-201ENST00000361371 C14orf37Q86TY3 774 aa3.85□□□□□ -1.79
LTN1-201ENST00000361371 ANKRD36BQ8N2N9 1353 aa3.85□□□□□ -1.79
LTN1-201ENST00000361371 TTC21BQ7Z4L5 1316 aa3.85□□□□□ -1.79
LTN1-201ENST00000361371 PLEKHG3A1L390 1219 aa3.85□□□□□ -1.79
LTN1-201ENST00000361371 U2SURPO15042 1029 aaKnown RBP3.85□□□□□ -1.79
LTN1-201ENST00000361371 HSP90AB2PQ58FF8 381 aa3.85□□□□□ -1.79
LTN1-201ENST00000361371 AEBP1Q8IUX7 1158 aa3.85□□□□□ -1.79
LTN1-201ENST00000361371 THUMPD2Q9BTF0 503 aaKnown RBP3.85□□□□□ -1.79
LTN1-201ENST00000361371 SPHKAPQ2M3C7 1700 aa3.85□□□□□ -1.79
LTN1-201ENST00000361371 BRD4O60885 1362 aaPredicted RBP3.85□□□□□ -1.79
LTN1-201ENST00000361371 NGDNQ8NEJ9 315 aaKnown RBP3.85□□□□□ -1.79
LTN1-201ENST00000361371 U2AF1L5P0DN76 240 aaPredicted RBP3.84□□□□□ -1.79
LTN1-201ENST00000361371 U2AF1Q01081 240 aaKnown RBP eCLIP3.84□□□□□ -1.793e-9■■■■□ 22.1
LTN1-201ENST00000361371 ESCO1Q5FWF5 840 aa3.84□□□□□ -1.79
LTN1-201ENST00000361371 HDGFL2Q7Z4V5 671 aaPredicted RBP3.84□□□□□ -1.79
LTN1-201ENST00000361371 TERF2IPQ9NYB0 399 aa3.84□□□□□ -1.79
LTN1-201ENST00000361371 HMOX1P09601 288 aa3.84□□□□□ -1.79
LTN1-201ENST00000361371 PHACTR3Q96KR7 559 aa3.84□□□□□ -1.79
LTN1-201ENST00000361371 PPIP5K1Q6PFW1 1433 aa3.84□□□□□ -1.79
LTN1-201ENST00000361371 CPS1P31327 1500 aa3.84□□□□□ -1.79
LTN1-201ENST00000361371 PLIN1O60240 522 aa3.84□□□□□ -1.79
LTN1-201ENST00000361371 PREX1Q8TCU6 1659 aa3.84□□□□□ -1.79
LTN1-201ENST00000361371 ATAD2Q6PL18 1390 aa3.84□□□□□ -1.79
LTN1-201ENST00000361371 CGNL1Q0VF96 1302 aa3.84□□□□□ -1.79
LTN1-201ENST00000361371 LMOD2Q6P5Q4 547 aa3.84□□□□□ -1.79
LTN1-201ENST00000361371 TCP11L2Q8N4U5 519 aa3.84□□□□□ -1.79
LTN1-201ENST00000361371 CABLES1Q8TDN4 633 aa3.84□□□□□ -1.79
LTN1-201ENST00000361371 PHF8Q9UPP1 1060 aa3.84□□□□□ -1.79
LTN1-201ENST00000361371 NPHP4O75161 1426 aaPredicted RBP3.84□□□□□ -1.8
LTN1-201ENST00000361371 PAK3O75914 559 aaPredicted RBP3.84□□□□□ -1.8
LTN1-201ENST00000361371 PUS7Q96PZ0 661 aaKnown RBP3.84□□□□□ -1.8
LTN1-201ENST00000361371 TECPR2O15040 1411 aa3.83□□□□□ -1.8
LTN1-201ENST00000361371 NLRP6P59044 892 aa3.83□□□□□ -1.8
LTN1-201ENST00000361371 TNNQ9UQP3 1299 aa3.83□□□□□ -1.8
LTN1-201ENST00000361371 TMEM94Q12767 1356 aa3.83□□□□□ -1.8
LTN1-201ENST00000361371 NKTRP30414 1462 aaKnown RBP3.83□□□□□ -1.8
LTN1-201ENST00000361371 ZBTB7CA1YPR0 619 aa3.83□□□□□ -1.8
LTN1-201ENST00000361371 NEURL4Q96JN8 1562 aa3.83□□□□□ -1.8
LTN1-201ENST00000361371 LTV1Q96GA3 475 aaPredicted RBP3.83□□□□□ -1.8
LTN1-201ENST00000361371 WDR43Q15061 677 aaKnown RBP eCLIP3.83□□□□□ -1.8
LTN1-201ENST00000361371 SKAP1Q86WV1 359 aa3.83□□□□□ -1.8
LTN1-201ENST00000361371 ZBED9Q6R2W3 1325 aa3.83□□□□□ -1.8
LTN1-201ENST00000361371 ATP7BP35670 1465 aa3.82□□□□□ -1.8
LTN1-201ENST00000361371 MAP3K19Q56UN5 1328 aa3.82□□□□□ -1.8
LTN1-201ENST00000361371 SLIT1O75093 1534 aa3.82□□□□□ -1.8
LTN1-201ENST00000361371 DLC1Q96QB1 1528 aa3.82□□□□□ -1.8
LTN1-201ENST00000361371 CPSF1Q10570 1443 aaKnown RBP3.82□□□□□ -1.8
LTN1-201ENST00000361371 DCTN1Q14203 1278 aa3.82□□□□□ -1.8
LTN1-201ENST00000361371 USHBP1Q8N6Y0 703 aa3.82□□□□□ -1.8
LTN1-201ENST00000361371 NPC1L1Q9UHC9 1359 aa3.82□□□□□ -1.8
LTN1-201ENST00000361371 FAM135BQ49AJ0 1406 aa3.82□□□□□ -1.8
LTN1-201ENST00000361371 CFAP65Q6ZU64 1925 aaKnown RBP3.82□□□□□ -1.8
LTN1-201ENST00000361371 FAM83GA6ND36 823 aa3.82□□□□□ -1.8
LTN1-201ENST00000361371 C20orf194Q5TEA3 1177 aa3.82□□□□□ -1.8
LTN1-201ENST00000361371 NRXN3Q9Y4C0 1643 aa3.82□□□□□ -1.8
LTN1-201ENST00000361371 TSR2Q969E8 191 aaKnown RBP3.82□□□□□ -1.8
LTN1-201ENST00000361371 ZNF521Q96K83 1311 aa3.82□□□□□ -1.8
LTN1-201ENST00000361371 TCERG1O14776 1098 aaKnown RBP3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms