RNA–Protein interactions for RNA: ENST00000361339.9

IFT140-201, Transcript of intraflagellar transport 140, humanhuman

TSL 1 (best) BASIC

Gene IFT140, Length 2,987 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-201ENST00000361339 ABCC3O15438 1527 aa21.09■□□□□ 0.97
IFT140-201ENST00000361339 UBE2Q2Q8WVN8 375 aa21.09■□□□□ 0.97
IFT140-201ENST00000361339 YEATS2Q9ULM3 1422 aa21.08■□□□□ 0.96
IFT140-201ENST00000361339 IDI1Q13907 227 aa21.07■□□□□ 0.96
IFT140-201ENST00000361339 NPC1L1Q9UHC9 1359 aa21.07■□□□□ 0.96
IFT140-201ENST00000361339 ADGRB1O14514 1584 aa21.07■□□□□ 0.96
IFT140-201ENST00000361339 CABP2Q9NPB3 220 aa21.06■□□□□ 0.96
IFT140-201ENST00000361339 NEURL4Q96JN8 1562 aa21.06■□□□□ 0.96
IFT140-201ENST00000361339 MORC1Q86VD1 984 aa21.06■□□□□ 0.96
IFT140-201ENST00000361339 CYB5RLQ6IPT4 315 aa21.06■□□□□ 0.96
IFT140-201ENST00000361339 PPLO60437 1756 aa21.04■□□□□ 0.96
IFT140-201ENST00000361339 ARXQ96QS3 562 aa21.03■□□□□ 0.96
IFT140-201ENST00000361339 FBXO31Q5XUX0 539 aaPredicted RBP21.03■□□□□ 0.96
IFT140-201ENST00000361339 QRICH2Q9H0J4 1663 aa21.02■□□□□ 0.95
IFT140-201ENST00000361339 TRMT2AQ8IZ69 625 aaKnown RBP21■□□□□ 0.95
IFT140-201ENST00000361339 MTHFSP49914 203 aa21■□□□□ 0.95
IFT140-201ENST00000361339 SBNO2Q9Y2G9 1366 aa21■□□□□ 0.95
IFT140-201ENST00000361339 MYO3AQ8NEV4 1616 aa21■□□□□ 0.95
IFT140-201ENST00000361339 CAMSAP1Q5T5Y3 1602 aa20.99■□□□□ 0.95
IFT140-201ENST00000361339 DIP2CQ9Y2E4 1556 aa20.99■□□□□ 0.95
IFT140-201ENST00000361339 FRAT2O75474 233 aaPredicted RBP20.99■□□□□ 0.95
IFT140-201ENST00000361339 WWC1Q8IX03 1113 aa20.97■□□□□ 0.95
IFT140-201ENST00000361339 SETBP1Q9Y6X0 1596 aa20.97■□□□□ 0.95
IFT140-201ENST00000361339 KDM2BQ8NHM5 1336 aa20.96■□□□□ 0.95
IFT140-201ENST00000361339 GLI2P10070 1586 aa20.96■□□□□ 0.95
IFT140-201ENST00000361339 CFAP74Q9C0B2 1584 aa20.96■□□□□ 0.95
IFT140-201ENST00000361339 TULP4Q9NRJ4 1543 aa20.95■□□□□ 0.94
IFT140-201ENST00000361339 DDRGK1Q96HY6 314 aa20.95■□□□□ 0.94
IFT140-201ENST00000361339 MINK1Q8N4C8 1332 aaPredicted RBP20.95■□□□□ 0.94
IFT140-201ENST00000361339 TNNQ9UQP3 1299 aa20.95■□□□□ 0.94
IFT140-201ENST00000361339 NEXMIFQ5QGS0 1516 aa20.95■□□□□ 0.94
IFT140-201ENST00000361339 VGFO15240 615 aaPredicted RBP20.94■□□□□ 0.94
IFT140-201ENST00000361339 ZC3H13Q5T200 1668 aaKnown RBP20.94■□□□□ 0.94
IFT140-201ENST00000361339 TCP11L2Q8N4U5 519 aa20.94■□□□□ 0.94
IFT140-201ENST00000361339 BCL2L13Q9BXK5 485 aa20.94■□□□□ 0.94
IFT140-201ENST00000361339 POLR3AO14802 1390 aaPredicted RBP20.94■□□□□ 0.94
IFT140-201ENST00000361339 NKTRP30414 1462 aaKnown RBP20.93■□□□□ 0.94
IFT140-201ENST00000361339 RPGRIP1LQ68CZ1 1315 aa20.93■□□□□ 0.94
IFT140-201ENST00000361339 RGS3P49796 1198 aa20.93■□□□□ 0.94
IFT140-201ENST00000361339 PANK1Q8TE04 598 aa20.92■□□□□ 0.94
IFT140-201ENST00000361339 GGNBP2Q9H3C7 697 aa20.92■□□□□ 0.94
IFT140-201ENST00000361339 E9PSI1 815 aa20.92■□□□□ 0.94
IFT140-201ENST00000361339 SLC24A1O60721 1099 aa20.92■□□□□ 0.94
IFT140-201ENST00000361339 MS4A1P11836 297 aa20.92■□□□□ 0.94
IFT140-201ENST00000361339 SRPK2P78362 688 aaKnown RBP20.92■□□□□ 0.94
IFT140-201ENST00000361339 NEO1Q92859 1461 aa20.92■□□□□ 0.94
IFT140-201ENST00000361339 EVC2Q86UK5 1308 aa20.91■□□□□ 0.94
IFT140-201ENST00000361339 SHPRHQ149N8 1683 aa20.91■□□□□ 0.94
IFT140-201ENST00000361339 CGNL1Q0VF96 1302 aa20.9■□□□□ 0.94
IFT140-201ENST00000361339 MYO5BQ9ULV0 1848 aa20.9■□□□□ 0.94
IFT140-201ENST00000361339 PIK3C2BO00750 1634 aa20.9■□□□□ 0.94
IFT140-201ENST00000361339 PRAM1Q96QH2 718 aa20.89■□□□□ 0.94
IFT140-201ENST00000361339 FBLN1P23142 703 aa20.89■□□□□ 0.93
IFT140-201ENST00000361339 FAM69CQ0P6D2 419 aa20.89■□□□□ 0.93
IFT140-201ENST00000361339 MLECQ14165 292 aa20.89■□□□□ 0.93
IFT140-201ENST00000361339 RICTORQ6R327 1708 aa20.88■□□□□ 0.93
IFT140-201ENST00000361339 COG6Q9Y2V7 657 aa20.88■□□□□ 0.93
IFT140-201ENST00000361339 ARHGEF28Q8N1W1 1705 aaKnown RBP20.88■□□□□ 0.93
IFT140-201ENST00000361339 IGHDP01880 384 aa20.88■□□□□ 0.93
IFT140-201ENST00000361339 U2AF1L5P0DN76 240 aaPredicted RBP20.87■□□□□ 0.93
IFT140-201ENST00000361339 U2AF1Q01081 240 aaKnown RBP eCLIP20.87■□□□□ 0.93
IFT140-201ENST00000361339 A0A1W2PP64 1363 aa20.87■□□□□ 0.93
IFT140-201ENST00000361339 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.86■□□□□ 0.93
IFT140-201ENST00000361339 RUNDC1Q96C34 613 aa20.86■□□□□ 0.93
IFT140-201ENST00000361339 CENPQQ7L2Z9 268 aaPredicted RBP20.85■□□□□ 0.93
IFT140-201ENST00000361339 ANKRD36BQ8N2N9 1353 aa20.84■□□□□ 0.93
IFT140-201ENST00000361339 CANXP27824 592 aaKnown RBP20.83■□□□□ 0.93
IFT140-201ENST00000361339 CLUAP1Q96AJ1 413 aa20.83■□□□□ 0.92
IFT140-201ENST00000361339 POGKQ9P215 609 aa20.83■□□□□ 0.92
IFT140-201ENST00000361339 U2SURPO15042 1029 aaKnown RBP20.82■□□□□ 0.92
IFT140-201ENST00000361339 RLBP1P12271 317 aa20.82■□□□□ 0.92
IFT140-201ENST00000361339 SLC52A1Q9NWF4 448 aa20.82■□□□□ 0.92
IFT140-201ENST00000361339 STAG3Q9UJ98 1225 aa20.82■□□□□ 0.92
IFT140-201ENST00000361339 WAPLQ7Z5K2 1190 aa20.81■□□□□ 0.92
IFT140-201ENST00000361339 TSR2Q969E8 191 aaKnown RBP20.81■□□□□ 0.92
IFT140-201ENST00000361339 IQSEC2Q5JU85 1478 aa20.81■□□□□ 0.92
IFT140-201ENST00000361339 ARHGAP31Q2M1Z3 1444 aa20.8■□□□□ 0.92
IFT140-201ENST00000361339 TSPOAP1O95153 1857 aa20.79■□□□□ 0.92
IFT140-201ENST00000361339 RARSP54136 660 aaKnown RBP20.79■□□□□ 0.92
IFT140-201ENST00000361339 C8orf34Q49A92 452 aa20.79■□□□□ 0.92
IFT140-201ENST00000361339 FYB1O15117 783 aa20.79■□□□□ 0.92
IFT140-201ENST00000361339 CFAP53Q96M91 514 aa20.79■□□□□ 0.92
IFT140-201ENST00000361339 PTPRMP28827 1452 aa20.78■□□□□ 0.92
IFT140-201ENST00000361339 TMEM131LA2VDJ0 1609 aa20.78■□□□□ 0.92
IFT140-201ENST00000361339 PHF23Q9BUL5 403 aaPredicted RBP20.78■□□□□ 0.92
IFT140-201ENST00000361339 SLKQ9H2G2 1235 aaPredicted RBP20.78■□□□□ 0.92
IFT140-201ENST00000361339 CABP1Q9NZU7 370 aa20.78■□□□□ 0.92
IFT140-201ENST00000361339 PREX1Q8TCU6 1659 aa20.77■□□□□ 0.92
IFT140-201ENST00000361339 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.76■□□□□ 0.91
IFT140-201ENST00000361339 CDK19Q9BWU1 502 aa20.76■□□□□ 0.91
IFT140-201ENST00000361339 YTHDC2Q9H6S0 1430 aaKnown RBP20.76■□□□□ 0.91
IFT140-201ENST00000361339 RSPH6AQ9H0K4 717 aa20.76■□□□□ 0.91
IFT140-201ENST00000361339 CD163L1Q9NR16 1453 aa20.74■□□□□ 0.91
IFT140-201ENST00000361339 ABCC11Q96J66 1382 aa20.74■□□□□ 0.91
IFT140-201ENST00000361339 NCKAP5LQ9HCH0 1330 aa20.73■□□□□ 0.91
IFT140-201ENST00000361339 FAM161AQ3B820 660 aa20.72■□□□□ 0.91
IFT140-201ENST00000361339 PCDHB15Q9Y5E8 787 aa20.72■□□□□ 0.91
IFT140-201ENST00000361339 FAM43AQ8N2R8 423 aa20.72■□□□□ 0.91
IFT140-201ENST00000361339 USP32Q8NFA0 1604 aa20.71■□□□□ 0.91
IFT140-201ENST00000361339 RRAGDQ9NQL2 400 aaPredicted RBP20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms