RNA–Protein interactions for RNA: ENST00000361168.9

CLK2-202, Transcript of CDC like kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLK2, Length 1,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-202ENST00000361168 ZEB1P37275 1124 aaPredicted RBP25.31■■□□□ 1.64
CLK2-202ENST00000361168 NALCNQ8IZF0 1738 aa25.3■■□□□ 1.64
CLK2-202ENST00000361168 ADGRL3Q9HAR2 1447 aa25.28■■□□□ 1.64
CLK2-202ENST00000361168 NUTM2FA1L443 756 aa25.27■■□□□ 1.64
CLK2-202ENST00000361168 HSPA5P11021 654 aaKnown RBP25.27■■□□□ 1.64
CLK2-202ENST00000361168 C19orf44Q9H6X5 657 aa25.27■■□□□ 1.64
CLK2-202ENST00000361168 TESK2Q96S53 571 aa25.25■■□□□ 1.63
CLK2-202ENST00000361168 EIF3AQ14152 1382 aaKnown RBP25.25■■□□□ 1.63
CLK2-202ENST00000361168 EIF4G2P78344 907 aaKnown RBP eCLIP25.24■■□□□ 1.63
CLK2-202ENST00000361168 NCOA3Q9Y6Q9 1424 aa25.24■■□□□ 1.63
CLK2-202ENST00000361168 QRICH2Q9H0J4 1663 aa25.24■■□□□ 1.63
CLK2-202ENST00000361168 MSH6P52701 1360 aa25.24■■□□□ 1.63
CLK2-202ENST00000361168 WASLO00401 505 aaPredicted RBP25.19■■□□□ 1.62
CLK2-202ENST00000361168 ATF3P18847 181 aa25.19■■□□□ 1.62
CLK2-202ENST00000361168 CDK19Q9BWU1 502 aa25.18■■□□□ 1.62
CLK2-202ENST00000361168 TULP4Q9NRJ4 1543 aa25.18■■□□□ 1.62
CLK2-202ENST00000361168 CABP2Q9NPB3 220 aa25.18■■□□□ 1.62
CLK2-202ENST00000361168 DISP3Q9P2K9 1392 aa25.16■■□□□ 1.62
CLK2-202ENST00000361168 UBAP1LF5GYI3 381 aa25.16■■□□□ 1.62
CLK2-202ENST00000361168 CADPS2Q86UW7 1296 aa25.16■■□□□ 1.62
CLK2-202ENST00000361168 ADGRB2O60241 1585 aa25.15■■□□□ 1.62
CLK2-202ENST00000361168 CDC42BPGQ6DT37 1551 aa25.15■■□□□ 1.62
CLK2-202ENST00000361168 PRR36Q9H6K5 1346 aa25.15■■□□□ 1.62
CLK2-202ENST00000361168 C11orf95C9JLR9 678 aaPredicted RBP25.15■■□□□ 1.62
CLK2-202ENST00000361168 SBNO2Q9Y2G9 1366 aa25.14■■□□□ 1.62
CLK2-202ENST00000361168 SLAIN2Q9P270 581 aa25.14■■□□□ 1.62
CLK2-202ENST00000361168 MST1RQ04912 1400 aa25.14■■□□□ 1.61
CLK2-202ENST00000361168 DCCP43146 1447 aa25.13■■□□□ 1.61
CLK2-202ENST00000361168 SRPK2P78362 688 aaKnown RBP25.13■■□□□ 1.61
CLK2-202ENST00000361168 ORAI2Q96SN7 254 aa25.13■■□□□ 1.61
CLK2-202ENST00000361168 PIP4K2BP78356 416 aa25.12■■□□□ 1.61
CLK2-202ENST00000361168 IQSEC2Q5JU85 1478 aa25.12■■□□□ 1.61
CLK2-202ENST00000361168 EVC2Q86UK5 1308 aa25.1■■□□□ 1.61
CLK2-202ENST00000361168 USP32Q8NFA0 1604 aa25.1■■□□□ 1.61
CLK2-202ENST00000361168 FMN2Q9NZ56 1722 aa25.09■■□□□ 1.61
CLK2-202ENST00000361168 C1orf167Q5SNV9 1468 aa25.09■■□□□ 1.61
CLK2-202ENST00000361168 TOM1O60784 492 aa25.08■■□□□ 1.61
CLK2-202ENST00000361168 NUDT16Q96DE0 195 aaKnown RBP25.08■■□□□ 1.61
CLK2-202ENST00000361168 SCAF1Q9H7N4 1312 aaKnown RBP25.07■■□□□ 1.6
CLK2-202ENST00000361168 RGPD8O14715 1765 aaPredicted RBP25.07■■□□□ 1.6
CLK2-202ENST00000361168 ATP7BP35670 1465 aa25.07■■□□□ 1.6
CLK2-202ENST00000361168 ESCO1Q5FWF5 840 aa25.07■■□□□ 1.6
CLK2-202ENST00000361168 TMF1P82094 1093 aa25.06■■□□□ 1.6
CLK2-202ENST00000361168 DDX17Q92841 729 aaKnown RBP25.06■■□□□ 1.6
CLK2-202ENST00000361168 BRINP3Q76B58 766 aa25.06■■□□□ 1.6
CLK2-202ENST00000361168 PMFBP1Q8TBY8 1022 aa25.05■■□□□ 1.6
CLK2-202ENST00000361168 POLR3GLQ9BT43 218 aa25.04■■□□□ 1.6
CLK2-202ENST00000361168 CABP1Q9NZU7 370 aa25.02■■□□□ 1.6
CLK2-202ENST00000361168 CCDC61Q9Y6R9 512 aa25.01■■□□□ 1.59
CLK2-202ENST00000361168 ANKARQ7Z5J8 1434 aa25■■□□□ 1.59
CLK2-202ENST00000361168 FOXO3O43524 673 aa24.99■■□□□ 1.59
CLK2-202ENST00000361168 SLC12A5Q9H2X9 1139 aa24.99■■□□□ 1.59
CLK2-202ENST00000361168 ROBO1Q9Y6N7 1651 aa24.99■■□□□ 1.59
CLK2-202ENST00000361168 KIF7Q2M1P5 1343 aa24.98■■□□□ 1.59
CLK2-202ENST00000361168 XPCQ01831 940 aaPredicted RBP24.98■■□□□ 1.59
CLK2-202ENST00000361168 PPIP5K1Q6PFW1 1433 aa24.97■■□□□ 1.59
CLK2-202ENST00000361168 WASHC2AQ641Q2 1341 aa24.97■■□□□ 1.59
CLK2-202ENST00000361168 TMC1Q8TDI8 760 aa24.97■■□□□ 1.59
CLK2-202ENST00000361168 PHF8Q9UPP1 1060 aa24.97■■□□□ 1.59
CLK2-202ENST00000361168 SLC24A1O60721 1099 aa24.94■■□□□ 1.58
CLK2-202ENST00000361168 TOPAZ1Q8N9V7 1692 aa24.94■■□□□ 1.58
CLK2-202ENST00000361168 ATAD2Q6PL18 1390 aa24.94■■□□□ 1.58
CLK2-202ENST00000361168 ACEP12821 1306 aa24.93■■□□□ 1.58
CLK2-202ENST00000361168 PLEKHG3A1L390 1219 aa24.91■■□□□ 1.58
CLK2-202ENST00000361168 NGDNQ8NEJ9 315 aaKnown RBP24.9■■□□□ 1.58
CLK2-202ENST00000361168 PUS7Q96PZ0 661 aaKnown RBP24.9■■□□□ 1.58
CLK2-202ENST00000361168 CDCA8Q53HL2 280 aa24.9■■□□□ 1.58
CLK2-202ENST00000361168 CD163L1Q9NR16 1453 aa24.89■■□□□ 1.58
CLK2-202ENST00000361168 CCDC7Q96M83 1385 aa24.89■■□□□ 1.58
CLK2-202ENST00000361168 FBXO41Q8TF61 875 aa24.88■■□□□ 1.57
CLK2-202ENST00000361168 ITSN1Q15811 1721 aa24.86■■□□□ 1.57
CLK2-202ENST00000361168 HSPA1LP34931 641 aa24.86■■□□□ 1.57
CLK2-202ENST00000361168 POLR3AO14802 1390 aaPredicted RBP24.86■■□□□ 1.57
CLK2-202ENST00000361168 MYOM1P52179 1685 aa24.86■■□□□ 1.57
CLK2-202ENST00000361168 PSME1Q06323 249 aa24.86■■□□□ 1.57
CLK2-202ENST00000361168 KRT28Q7Z3Y7 464 aa24.84■■□□□ 1.57
CLK2-202ENST00000361168 A0A1W2PP64 1363 aa24.84■■□□□ 1.57
CLK2-202ENST00000361168 NPHP3Q7Z494 1330 aa24.84■■□□□ 1.57
CLK2-202ENST00000361168 CPSF1Q10570 1443 aaKnown RBP24.83■■□□□ 1.57
CLK2-202ENST00000361168 KIF1AQ12756 1690 aa24.83■■□□□ 1.56
CLK2-202ENST00000361168 PXDNQ92626 1479 aa24.82■■□□□ 1.56
CLK2-202ENST00000361168 NHSL1Q5SYE7 1610 aa24.82■■□□□ 1.56
CLK2-202ENST00000361168 SOS2Q07890 1332 aaPredicted RBP24.82■■□□□ 1.56
CLK2-202ENST00000361168 CARD14Q9BXL6 1004 aa24.81■■□□□ 1.56
CLK2-202ENST00000361168 AHDC1Q5TGY3 1603 aaPredicted RBP24.8■■□□□ 1.56
CLK2-202ENST00000361168 ZNF316A6NFI3 1004 aaPredicted RBP24.79■■□□□ 1.56
CLK2-202ENST00000361168 PAK3O75914 559 aaPredicted RBP24.79■■□□□ 1.56
CLK2-202ENST00000361168 PANK3Q9H999 370 aa24.79■■□□□ 1.56
CLK2-202ENST00000361168 USP6P35125 1406 aa24.79■■□□□ 1.56
CLK2-202ENST00000361168 KTN1Q86UP2 1357 aaKnown RBP24.79■■□□□ 1.56
CLK2-202ENST00000361168 PHLPP1O60346 1717 aa24.77■■□□□ 1.56
CLK2-202ENST00000361168 PLEKHG5O94827 1062 aa24.77■■□□□ 1.56
CLK2-202ENST00000361168 TERF2IPQ9NYB0 399 aa24.77■■□□□ 1.56
CLK2-202ENST00000361168 ANKRD36BQ8N2N9 1353 aa24.77■■□□□ 1.56
CLK2-202ENST00000361168 NINLQ9Y2I6 1382 aa24.77■■□□□ 1.56
CLK2-202ENST00000361168 COL16A1Q07092 1604 aaPredicted RBP24.77■■□□□ 1.56
CLK2-202ENST00000361168 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.76■■□□□ 1.55
CLK2-202ENST00000361168 NUTM2GQ5VZR2 741 aa24.76■■□□□ 1.55
CLK2-202ENST00000361168 HDGFL2Q7Z4V5 671 aaPredicted RBP24.76■■□□□ 1.55
CLK2-202ENST00000361168 SSH2Q76I76 1423 aa24.75■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms