RNA–Protein interactions for RNA: ENST00000360495.9

CCDC144A-203, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 1 (best)

Gene CCDC144A, Length 5,545 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-203ENST00000360495 NFXL1Q6ZNB6 911 aa16.09■□□□□ 0.17
CCDC144A-203ENST00000360495 FMNL2Q96PY5 1086 aa16.09■□□□□ 0.17
CCDC144A-203ENST00000360495 TRAK1Q9UPV9 953 aa16.09■□□□□ 0.17
CCDC144A-203ENST00000360495 FIBPO43427 364 aa16.09■□□□□ 0.17
CCDC144A-203ENST00000360495 RABEP1Q15276 862 aa16.09■□□□□ 0.17
CCDC144A-203ENST00000360495 NEK4P51957 841 aa16.08■□□□□ 0.16
CCDC144A-203ENST00000360495 ZSCAN30Q86W11 494 aa16.08■□□□□ 0.16
CCDC144A-203ENST00000360495 EIF3JO75822 258 aaKnown RBP16.08■□□□□ 0.16
CCDC144A-203ENST00000360495 RIPK4P57078 832 aa16.08■□□□□ 0.16
CCDC144A-203ENST00000360495 MYO6Q9UM54 1294 aa16.08■□□□□ 0.16
CCDC144A-203ENST00000360495 TMX4Q9H1E5 349 aaPredicted RBP16.07■□□□□ 0.16
CCDC144A-203ENST00000360495 OFD1O75665 1012 aa16.07■□□□□ 0.16
CCDC144A-203ENST00000360495 CT47A1Q5JQC4 288 aaPredicted RBP16.07■□□□□ 0.16
CCDC144A-203ENST00000360495 SMARCE1Q969G3 411 aa16.07■□□□□ 0.16
CCDC144A-203ENST00000360495 CCDC192P0DO97 292 aa16.07■□□□□ 0.16
CCDC144A-203ENST00000360495 UBE2Q2Q8WVN8 375 aa16.07■□□□□ 0.16
CCDC144A-203ENST00000360495 PDZRN3Q9UPQ7 1066 aa16.07■□□□□ 0.16
CCDC144A-203ENST00000360495 MCM2P49736 904 aa16.07■□□□□ 0.16
CCDC144A-203ENST00000360495 ERC2O15083 957 aa16.06■□□□□ 0.16
CCDC144A-203ENST00000360495 ERLIN1O75477 346 aa16.06■□□□□ 0.16
CCDC144A-203ENST00000360495 MCM4P33991 863 aa16.06■□□□□ 0.16
CCDC144A-203ENST00000360495 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.06■□□□□ 0.16
CCDC144A-203ENST00000360495 RUNDC1Q96C34 613 aa16.06■□□□□ 0.16
CCDC144A-203ENST00000360495 CNTLNQ9NXG0 1405 aa16.06■□□□□ 0.16
CCDC144A-203ENST00000360495 CCDC7Q96M83 1385 aa16.06■□□□□ 0.16
CCDC144A-203ENST00000360495 NEXNQ0ZGT2 675 aa16.05■□□□□ 0.16
CCDC144A-203ENST00000360495 CBX1P83916 185 aa16.05■□□□□ 0.16
CCDC144A-203ENST00000360495 G3BP1Q13283 466 aaKnown RBP eCLIP16.05■□□□□ 0.16
CCDC144A-203ENST00000360495 HSP90AB2PQ58FF8 381 aa16.05■□□□□ 0.16
CCDC144A-203ENST00000360495 GOLGA6L7A0A1B0GV03 622 aa16.04■□□□□ 0.16
CCDC144A-203ENST00000360495 NUTM2DQ5VT03 806 aaPredicted RBP16.04■□□□□ 0.16
CCDC144A-203ENST00000360495 EIF2S2P20042 333 aaKnown RBP16.04■□□□□ 0.16
CCDC144A-203ENST00000360495 PSMA5P28066 241 aa16.04■□□□□ 0.16
CCDC144A-203ENST00000360495 DHX8Q14562 1220 aaKnown RBP16.04■□□□□ 0.16
CCDC144A-203ENST00000360495 NGDNQ8NEJ9 315 aaKnown RBP16.04■□□□□ 0.16
CCDC144A-203ENST00000360495 CWC22Q9HCG8 908 aaKnown RBP16.04■□□□□ 0.16
CCDC144A-203ENST00000360495 FKBP5Q13451 457 aaPredicted RBP16.04■□□□□ 0.16
CCDC144A-203ENST00000360495 FILIP1LQ4L180 1135 aa16.04■□□□□ 0.16
CCDC144A-203ENST00000360495 CCDC88BA6NC98 1476 aa16.04■□□□□ 0.16
CCDC144A-203ENST00000360495 KIF7Q2M1P5 1343 aa16.04■□□□□ 0.16
CCDC144A-203ENST00000360495 HSP90AB4PQ58FF6 505 aa16.03■□□□□ 0.16
CCDC144A-203ENST00000360495 GOLGA6L10A6NI86 522 aa16.03■□□□□ 0.16
CCDC144A-203ENST00000360495 PDCL3Q9H2J4 239 aa16.03■□□□□ 0.16
CCDC144A-203ENST00000360495 CCDC144AA2RUR9 1427 aa16.03■□□□□ 0.16
CCDC144A-203ENST00000360495 PDCP20941 246 aa16.03■□□□□ 0.16
CCDC144A-203ENST00000360495 ERICH2A1L162 156 aa16.03■□□□□ 0.16
CCDC144A-203ENST00000360495 AEBP1Q8IUX7 1158 aa16.03■□□□□ 0.16
CCDC144A-203ENST00000360495 NECTIN2Q92692 538 aa16.02■□□□□ 0.16
CCDC144A-203ENST00000360495 ABCC8Q09428 1581 aa16.02■□□□□ 0.16
CCDC144A-203ENST00000360495 G3V3G9 751 aa16.02■□□□□ 0.16
CCDC144A-203ENST00000360495 DIAPH1O60610 1272 aaKnown RBP16.02■□□□□ 0.16
CCDC144A-203ENST00000360495 DCAF8Q5TAQ9 597 aa16.02■□□□□ 0.16
CCDC144A-203ENST00000360495 K7ELQ4 463 aaPredicted RBP16.02■□□□□ 0.16
CCDC144A-203ENST00000360495 CDCA7LQ96GN5 454 aa16.02■□□□□ 0.15
CCDC144A-203ENST00000360495 MSH5O43196 834 aa16.02■□□□□ 0.15
CCDC144A-203ENST00000360495 RALYLQ86SE5 291 aaKnown RBP16.02■□□□□ 0.15
CCDC144A-203ENST00000360495 CECR2Q9BXF3 1484 aa16.01■□□□□ 0.15
CCDC144A-203ENST00000360495 ODF2Q5BJF6 829 aa16.01■□□□□ 0.15
CCDC144A-203ENST00000360495 EPS15P42566 896 aa16.01■□□□□ 0.15
CCDC144A-203ENST00000360495 SERPINC1P01008 464 aa16.01■□□□□ 0.15
CCDC144A-203ENST00000360495 BRPF1P55201 1214 aaPredicted RBP16.01■□□□□ 0.15
CCDC144A-203ENST00000360495 DHX37Q8IY37 1157 aaKnown RBP16.01■□□□□ 0.15
CCDC144A-203ENST00000360495 TNMDQ9H2S6 317 aa16.01■□□□□ 0.15
CCDC144A-203ENST00000360495 GTF2E1P29083 439 aaPredicted RBP16.01■□□□□ 0.15
CCDC144A-203ENST00000360495 COG3Q96JB2 828 aa16.01■□□□□ 0.15
CCDC144A-203ENST00000360495 ZMYND15Q9H091 742 aa16.01■□□□□ 0.15
CCDC144A-203ENST00000360495 NINLQ9Y2I6 1382 aa16.01■□□□□ 0.15
CCDC144A-203ENST00000360495 KIF3BO15066 747 aa16■□□□□ 0.15
CCDC144A-203ENST00000360495 DHX16O60231 1041 aaKnown RBP16■□□□□ 0.15
CCDC144A-203ENST00000360495 FAM177A1Q8N128 213 aaPredicted RBP16■□□□□ 0.15
CCDC144A-203ENST00000360495 GIMAP7Q8NHV1 300 aa16■□□□□ 0.15
CCDC144A-203ENST00000360495 TEFQ10587 303 aa16■□□□□ 0.15
CCDC144A-203ENST00000360495 CENPHQ9H3R5 247 aa16■□□□□ 0.15
CCDC144A-203ENST00000360495 TCEAL9Q9UHQ7 104 aa16■□□□□ 0.15
CCDC144A-203ENST00000360495 CGNQ9P2M7 1197 aaKnown RBP15.99■□□□□ 0.15
CCDC144A-203ENST00000360495 AMOTL1Q8IY63 956 aa15.99■□□□□ 0.15
CCDC144A-203ENST00000360495 CCDC102AQ96A19 550 aa15.99■□□□□ 0.15
CCDC144A-203ENST00000360495 HNRNPMP52272 730 aaKnown RBP eCLIP15.99■□□□□ 0.15
CCDC144A-203ENST00000360495 ZRSR2Q15696 482 aaKnown RBP15.99■□□□□ 0.15
CCDC144A-203ENST00000360495 AKNAQ7Z591 1439 aa15.99■□□□□ 0.15
CCDC144A-203ENST00000360495 GNAI1P63096 354 aa15.99■□□□□ 0.15
CCDC144A-203ENST00000360495 CNTROBQ8N137 903 aa15.99■□□□□ 0.15
CCDC144A-203ENST00000360495 CIZ1Q9ULV3 898 aaPredicted RBP15.99■□□□□ 0.15
CCDC144A-203ENST00000360495 BRD4O60885 1362 aaPredicted RBP15.98■□□□□ 0.15
CCDC144A-203ENST00000360495 SMARCA2P51531 1590 aa15.98■□□□□ 0.15
CCDC144A-203ENST00000360495 CCDC18Q5T9S5 1454 aa15.98■□□□□ 0.15
CCDC144A-203ENST00000360495 WDR33Q9C0J8 1336 aaKnown RBP15.98■□□□□ 0.15
CCDC144A-203ENST00000360495 FAM193AP78312 1265 aa15.98■□□□□ 0.15
CCDC144A-203ENST00000360495 CEBPZQ03701 1054 aaKnown RBP15.98■□□□□ 0.15
CCDC144A-203ENST00000360495 ZNF396Q96N95 335 aaPredicted RBP15.98■□□□□ 0.15
CCDC144A-203ENST00000360495 C1orf141Q5JVX7 400 aa15.98■□□□□ 0.15
CCDC144A-203ENST00000360495 EFCAB2Q5VUJ9 269 aa15.98■□□□□ 0.15
CCDC144A-203ENST00000360495 EVC2Q86UK5 1308 aa15.98■□□□□ 0.15
CCDC144A-203ENST00000360495 CALCOCO1Q9P1Z2 691 aa15.97■□□□□ 0.15
CCDC144A-203ENST00000360495 ZFYVE27Q5T4F4 411 aa15.97■□□□□ 0.15
CCDC144A-203ENST00000360495 ZHX1Q9UKY1 873 aaPredicted RBP15.97■□□□□ 0.15
CCDC144A-203ENST00000360495 RAD21O60216 631 aa15.97■□□□□ 0.15
CCDC144A-203ENST00000360495 ERLIN2O94905 339 aa15.97■□□□□ 0.15
CCDC144A-203ENST00000360495 UBXN4Q92575 508 aa15.97■□□□□ 0.15
CCDC144A-203ENST00000360495 STK38Q15208 465 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms