RNA–Protein interactions for RNA: ENST00000359867.7

CSNK1E-201, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-201ENST00000359867 QRICH2Q9H0J4 1663 aa18.9■□□□□ 0.62
CSNK1E-201ENST00000359867 PLEKHH1Q9ULM0 1364 aa18.9■□□□□ 0.62
CSNK1E-201ENST00000359867 POGKQ9P215 609 aa18.89■□□□□ 0.62
CSNK1E-201ENST00000359867 DISP3Q9P2K9 1392 aa18.89■□□□□ 0.62
CSNK1E-201ENST00000359867 ROBO2Q9HCK4 1378 aa18.88■□□□□ 0.61
CSNK1E-201ENST00000359867 KNDC1Q76NI1 1749 aa18.87■□□□□ 0.61
CSNK1E-201ENST00000359867 KCNA6P17658 529 aa18.87■□□□□ 0.61
CSNK1E-201ENST00000359867 TECPR2O15040 1411 aa18.87■□□□□ 0.61
CSNK1E-201ENST00000359867 DLC1Q96QB1 1528 aa18.87■□□□□ 0.61
CSNK1E-201ENST00000359867 MINK1Q8N4C8 1332 aaPredicted RBP18.86■□□□□ 0.61
CSNK1E-201ENST00000359867 CPS1P31327 1500 aa18.86■□□□□ 0.61
CSNK1E-201ENST00000359867 XRN1Q8IZH2 1706 aaKnown RBP18.86■□□□□ 0.61
CSNK1E-201ENST00000359867 TMF1P82094 1093 aa18.85■□□□□ 0.61
CSNK1E-201ENST00000359867 CHD2O14647 1828 aaKnown RBP18.85■□□□□ 0.61
CSNK1E-201ENST00000359867 PIK3R4Q99570 1358 aa18.84■□□□□ 0.61
CSNK1E-201ENST00000359867 KTN1Q86UP2 1357 aaKnown RBP18.84■□□□□ 0.61
CSNK1E-201ENST00000359867 RBM33Q96EV2 1170 aaKnown RBP18.83■□□□□ 0.61
CSNK1E-201ENST00000359867 SBNO2Q9Y2G9 1366 aa18.83■□□□□ 0.6
CSNK1E-201ENST00000359867 FAM135BQ49AJ0 1406 aa18.82■□□□□ 0.6
CSNK1E-201ENST00000359867 SLC24A1O60721 1099 aa18.81■□□□□ 0.6
CSNK1E-201ENST00000359867 AEBP2Q6ZN18 517 aaPredicted RBP18.81■□□□□ 0.6
CSNK1E-201ENST00000359867 TULP4Q9NRJ4 1543 aa18.81■□□□□ 0.6
CSNK1E-201ENST00000359867 PTCH1Q13635 1447 aa18.8■□□□□ 0.6
CSNK1E-201ENST00000359867 MRS2Q9HD23 443 aa18.8■□□□□ 0.6
CSNK1E-201ENST00000359867 CCDC184Q52MB2 194 aa18.79■□□□□ 0.6
CSNK1E-201ENST00000359867 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.78■□□□□ 0.6
CSNK1E-201ENST00000359867 CDCA8Q53HL2 280 aa18.78■□□□□ 0.6
CSNK1E-201ENST00000359867 SIRT1Q96EB6 747 aa18.78■□□□□ 0.6
CSNK1E-201ENST00000359867 NEFLP07196 543 aa18.78■□□□□ 0.6
CSNK1E-201ENST00000359867 STRCP1A6NGW2 1772 aa18.78■□□□□ 0.6
CSNK1E-201ENST00000359867 RALBP1Q15311 655 aa18.77■□□□□ 0.6
CSNK1E-201ENST00000359867 NWD1Q149M9 1564 aa18.77■□□□□ 0.59
CSNK1E-201ENST00000359867 CABP2Q9NPB3 220 aa18.76■□□□□ 0.59
CSNK1E-201ENST00000359867 EVC2Q86UK5 1308 aa18.76■□□□□ 0.59
CSNK1E-201ENST00000359867 ZNF335Q9H4Z2 1342 aaPredicted RBP18.75■□□□□ 0.59
CSNK1E-201ENST00000359867 SRPK2P78362 688 aaKnown RBP18.75■□□□□ 0.59
CSNK1E-201ENST00000359867 PER1O15534 1290 aaPredicted RBP18.74■□□□□ 0.59
CSNK1E-201ENST00000359867 HNRNPUQ00839 825 aaKnown RBP eCLIP18.73■□□□□ 0.59
CSNK1E-201ENST00000359867 CDK19Q9BWU1 502 aa18.73■□□□□ 0.59
CSNK1E-201ENST00000359867 PROSER2Q86WR7 435 aaPredicted RBP18.72■□□□□ 0.59
CSNK1E-201ENST00000359867 NUTM2FA1L443 756 aa18.71■□□□□ 0.59
CSNK1E-201ENST00000359867 NALCNQ8IZF0 1738 aa18.71■□□□□ 0.59
CSNK1E-201ENST00000359867 WASLO00401 505 aaPredicted RBP18.71■□□□□ 0.59
CSNK1E-201ENST00000359867 DMRT2Q9Y5R5 561 aa18.71■□□□□ 0.59
CSNK1E-201ENST00000359867 MYBBP1AQ9BQG0 1328 aaKnown RBP18.71■□□□□ 0.59
CSNK1E-201ENST00000359867 MYOM1P52179 1685 aa18.71■□□□□ 0.59
CSNK1E-201ENST00000359867 NKTRP30414 1462 aaKnown RBP18.7■□□□□ 0.58
CSNK1E-201ENST00000359867 C14orf37Q86TY3 774 aa18.7■□□□□ 0.58
CSNK1E-201ENST00000359867 FAM9BQ8IZU0 186 aa18.7■□□□□ 0.58
CSNK1E-201ENST00000359867 BRD4O60885 1362 aaPredicted RBP18.69■□□□□ 0.58
CSNK1E-201ENST00000359867 PARD3Q8TEW0 1356 aa18.69■□□□□ 0.58
CSNK1E-201ENST00000359867 TMC1Q8TDI8 760 aa18.69■□□□□ 0.58
CSNK1E-201ENST00000359867 PANK3Q9H999 370 aa18.69■□□□□ 0.58
CSNK1E-201ENST00000359867 ADGRB2O60241 1585 aa18.69■□□□□ 0.58
CSNK1E-201ENST00000359867 ANO8Q9HCE9 1232 aaPredicted RBP18.68■□□□□ 0.58
CSNK1E-201ENST00000359867 TMEM94Q12767 1356 aa18.67■□□□□ 0.58
CSNK1E-201ENST00000359867 SLC12A5Q9H2X9 1139 aa18.67■□□□□ 0.58
CSNK1E-201ENST00000359867 ADGRL3Q9HAR2 1447 aa18.66■□□□□ 0.58
CSNK1E-201ENST00000359867 IRX6P78412 446 aaPredicted RBP18.66■□□□□ 0.58
CSNK1E-201ENST00000359867 RBM19Q9Y4C8 960 aaKnown RBP18.66■□□□□ 0.58
CSNK1E-201ENST00000359867 PRR36Q9H6K5 1346 aa18.65■□□□□ 0.58
CSNK1E-201ENST00000359867 CNGB1Q14028 1251 aaPredicted RBP18.65■□□□□ 0.58
CSNK1E-201ENST00000359867 ATAD2Q6PL18 1390 aa18.64■□□□□ 0.57
CSNK1E-201ENST00000359867 NUDT16Q96DE0 195 aaKnown RBP18.64■□□□□ 0.57
CSNK1E-201ENST00000359867 ATP7BP35670 1465 aa18.63■□□□□ 0.57
CSNK1E-201ENST00000359867 PNISRQ8TF01 805 aaKnown RBP18.63■□□□□ 0.57
CSNK1E-201ENST00000359867 ZBED9Q6R2W3 1325 aa18.63■□□□□ 0.57
CSNK1E-201ENST00000359867 NLRP13Q86W25 1043 aa18.63■□□□□ 0.57
CSNK1E-201ENST00000359867 PUS7Q96PZ0 661 aaKnown RBP18.62■□□□□ 0.57
CSNK1E-201ENST00000359867 CABP1Q9NZU7 370 aa18.62■□□□□ 0.57
CSNK1E-201ENST00000359867 XIRP1Q702N8 1843 aaKnown RBP18.62■□□□□ 0.57
CSNK1E-201ENST00000359867 LRRC7Q96NW7 1537 aa18.62■□□□□ 0.57
CSNK1E-201ENST00000359867 CDC42BPGQ6DT37 1551 aa18.61■□□□□ 0.57
CSNK1E-201ENST00000359867 RGPD8O14715 1765 aaPredicted RBP18.61■□□□□ 0.57
CSNK1E-201ENST00000359867 USP32Q8NFA0 1604 aa18.61■□□□□ 0.57
CSNK1E-201ENST00000359867 PPIP5K1Q6PFW1 1433 aa18.6■□□□□ 0.57
CSNK1E-201ENST00000359867 FMN2Q9NZ56 1722 aa18.6■□□□□ 0.57
CSNK1E-201ENST00000359867 KNSTRNQ9Y448 316 aa18.59■□□□□ 0.57
CSNK1E-201ENST00000359867 CCDC61Q9Y6R9 512 aa18.59■□□□□ 0.57
CSNK1E-201ENST00000359867 C19orf44Q9H6X5 657 aa18.58■□□□□ 0.57
CSNK1E-201ENST00000359867 NPC1L1Q9UHC9 1359 aa18.58■□□□□ 0.57
CSNK1E-201ENST00000359867 CARD14Q9BXL6 1004 aa18.57■□□□□ 0.56
CSNK1E-201ENST00000359867 A0A1W2PP64 1363 aa18.57■□□□□ 0.56
CSNK1E-201ENST00000359867 CD163L1Q9NR16 1453 aa18.57■□□□□ 0.56
CSNK1E-201ENST00000359867 TOPAZ1Q8N9V7 1692 aa18.56■□□□□ 0.56
CSNK1E-201ENST00000359867 CC2D1BQ5T0F9 858 aaKnown RBP18.56■□□□□ 0.56
CSNK1E-201ENST00000359867 PMFBP1Q8TBY8 1022 aa18.56■□□□□ 0.56
CSNK1E-201ENST00000359867 ANKRD36BQ8N2N9 1353 aa18.55■□□□□ 0.56
CSNK1E-201ENST00000359867 NINLQ9Y2I6 1382 aa18.55■□□□□ 0.56
CSNK1E-201ENST00000359867 AMER1Q5JTC6 1135 aaPredicted RBP18.54■□□□□ 0.56
CSNK1E-201ENST00000359867 MSH6P52701 1360 aa18.54■□□□□ 0.56
CSNK1E-201ENST00000359867 LTBP4Q8N2S1 1624 aa18.54■□□□□ 0.56
CSNK1E-201ENST00000359867 NCOA3Q9Y6Q9 1424 aa18.54■□□□□ 0.56
CSNK1E-201ENST00000359867 NSD3Q9BZ95 1437 aa18.54■□□□□ 0.56
CSNK1E-201ENST00000359867 ATF3P18847 181 aa18.53■□□□□ 0.56
CSNK1E-201ENST00000359867 ANKARQ7Z5J8 1434 aa18.53■□□□□ 0.56
CSNK1E-201ENST00000359867 INSRP06213 1382 aa18.53■□□□□ 0.56
CSNK1E-201ENST00000359867 ITSN1Q15811 1721 aa18.53■□□□□ 0.56
CSNK1E-201ENST00000359867 MSH5O43196 834 aa18.53■□□□□ 0.56
CSNK1E-201ENST00000359867 TERF2IPQ9NYB0 399 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms