RNA–Protein interactions for RNA: ENST00000359060.5

SSU72-202, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2 BASIC

Gene SSU72, Length 4,176 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-202ENST00000359060 HSP90AA1P07900 732 aaKnown RBP14.26□□□□□ -0.13
SSU72-202ENST00000359060 HMOX1P09601 288 aa14.26□□□□□ -0.13
SSU72-202ENST00000359060 ZKSCAN2Q63HK3 967 aa14.26□□□□□ -0.13
SSU72-202ENST00000359060 CDK19Q9BWU1 502 aa14.26□□□□□ -0.13
SSU72-202ENST00000359060 SPINK5Q9NQ38 1064 aaPredicted RBP14.26□□□□□ -0.13
SSU72-202ENST00000359060 UGGT1Q9NYU2 1555 aa14.25□□□□□ -0.13
SSU72-202ENST00000359060 IPO8O15397 1037 aaKnown RBP14.25□□□□□ -0.13
SSU72-202ENST00000359060 WAPLQ7Z5K2 1190 aa14.24□□□□□ -0.13
SSU72-202ENST00000359060 SPRYD3Q8NCJ5 442 aa14.23□□□□□ -0.13
SSU72-202ENST00000359060 EXOSC9Q06265 439 aaKnown RBP14.23□□□□□ -0.13
SSU72-202ENST00000359060 IQGAP3Q86VI3 1631 aa14.23□□□□□ -0.13
SSU72-202ENST00000359060 PLXNC1O60486 1568 aa14.23□□□□□ -0.13
SSU72-202ENST00000359060 TXNDC2Q86VQ3 553 aa14.23□□□□□ -0.13
SSU72-202ENST00000359060 DZIP1LQ8IYY4 767 aaKnown RBP14.22□□□□□ -0.13
SSU72-202ENST00000359060 SLKQ9H2G2 1235 aaPredicted RBP14.22□□□□□ -0.13
SSU72-202ENST00000359060 TRPM1Q7Z4N2 1603 aa14.22□□□□□ -0.13
SSU72-202ENST00000359060 PDE3AQ14432 1141 aa14.22□□□□□ -0.13
SSU72-202ENST00000359060 PRDM15P57071 1507 aaPredicted RBP14.21□□□□□ -0.13
SSU72-202ENST00000359060 UNC13BO14795 1591 aa14.21□□□□□ -0.13
SSU72-202ENST00000359060 COG3Q96JB2 828 aa14.21□□□□□ -0.13
SSU72-202ENST00000359060 DMRT2Q9Y5R5 561 aa14.21□□□□□ -0.14
SSU72-202ENST00000359060 NKTRP30414 1462 aaKnown RBP14.2□□□□□ -0.14
SSU72-202ENST00000359060 ZFYVE16Q7Z3T8 1539 aa14.2□□□□□ -0.14
SSU72-202ENST00000359060 PIK3C2GO75747 1445 aa14.2□□□□□ -0.14
SSU72-202ENST00000359060 FBLN1P23142 703 aa14.19□□□□□ -0.14
SSU72-202ENST00000359060 PRKAR2BP31323 418 aa14.19□□□□□ -0.14
SSU72-202ENST00000359060 WDR63Q8IWG1 891 aa14.19□□□□□ -0.14
SSU72-202ENST00000359060 TRPM2O94759 1503 aa14.19□□□□□ -0.14
SSU72-202ENST00000359060 PTPRTO14522 1441 aa14.18□□□□□ -0.14
SSU72-202ENST00000359060 TRHP20396 242 aaPredicted RBP14.18□□□□□ -0.14
SSU72-202ENST00000359060 BLMP54132 1417 aaPredicted RBP14.18□□□□□ -0.14
SSU72-202ENST00000359060 RARSP54136 660 aaKnown RBP14.18□□□□□ -0.14
SSU72-202ENST00000359060 MFAP1P55081 439 aaKnown RBP14.18□□□□□ -0.14
SSU72-202ENST00000359060 NPATQ14207 1427 aa14.18□□□□□ -0.14
SSU72-202ENST00000359060 CALD1Q05682 793 aaKnown RBP14.18□□□□□ -0.14
SSU72-202ENST00000359060 APBB1O00213 710 aa14.17□□□□□ -0.14
SSU72-202ENST00000359060 ATAD2Q6PL18 1390 aa14.17□□□□□ -0.14
SSU72-202ENST00000359060 TMPOP42166 694 aaKnown RBP14.16□□□□□ -0.14
SSU72-202ENST00000359060 NGDNQ8NEJ9 315 aaKnown RBP14.15□□□□□ -0.14
SSU72-202ENST00000359060 POLR1AO95602 1720 aaPredicted RBP14.15□□□□□ -0.14
SSU72-202ENST00000359060 LMOD2Q6P5Q4 547 aa14.15□□□□□ -0.14
SSU72-202ENST00000359060 EID1Q9Y6B2 187 aa14.15□□□□□ -0.14
SSU72-202ENST00000359060 NPC1L1Q9UHC9 1359 aa14.14□□□□□ -0.15
SSU72-202ENST00000359060 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.14□□□□□ -0.15
SSU72-202ENST00000359060 DDX19BQ9UMR2 479 aa14.14□□□□□ -0.15
SSU72-202ENST00000359060 ZMYM4Q5VZL5 1548 aa14.14□□□□□ -0.15
SSU72-202ENST00000359060 POGZQ7Z3K3 1410 aa14.14□□□□□ -0.15
SSU72-202ENST00000359060 CHMP4BQ9H444 224 aaKnown RBP14.14□□□□□ -0.15
SSU72-202ENST00000359060 PDZRN3Q9UPQ7 1066 aa14.14□□□□□ -0.15
SSU72-202ENST00000359060 POLR3AO14802 1390 aaPredicted RBP14.14□□□□□ -0.15
SSU72-202ENST00000359060 IGHDP01880 384 aa14.14□□□□□ -0.15
SSU72-202ENST00000359060 THUMPD2Q9BTF0 503 aaKnown RBP14.14□□□□□ -0.15
SSU72-202ENST00000359060 CLTCL1P53675 1640 aa14.13□□□□□ -0.15
SSU72-202ENST00000359060 TNNQ9UQP3 1299 aa14.13□□□□□ -0.15
SSU72-202ENST00000359060 SHROOM2Q13796 1616 aa14.13□□□□□ -0.15
SSU72-202ENST00000359060 FYB1O15117 783 aa14.13□□□□□ -0.15
SSU72-202ENST00000359060 RTF1Q92541 710 aaKnown RBP14.13□□□□□ -0.15
SSU72-202ENST00000359060 ERVK-7P63135 1459 aa14.13□□□□□ -0.15
SSU72-202ENST00000359060 RRS1Q15050 365 aaKnown RBP14.13□□□□□ -0.15
SSU72-202ENST00000359060 RTN4Q9NQC3 1192 aaKnown RBP14.13□□□□□ -0.15
SSU72-202ENST00000359060 NOB1Q9ULX3 412 aaKnown RBP14.12□□□□□ -0.15
SSU72-202ENST00000359060 ANKRD36BQ8N2N9 1353 aa14.12□□□□□ -0.15
SSU72-202ENST00000359060 CLASP1Q7Z460 1538 aa14.12□□□□□ -0.15
SSU72-202ENST00000359060 E9PCH4 1651 aa14.11□□□□□ -0.15
SSU72-202ENST00000359060 LMOD3Q0VAK6 560 aa14.11□□□□□ -0.15
SSU72-202ENST00000359060 LTV1Q96GA3 475 aaPredicted RBP14.11□□□□□ -0.15
SSU72-202ENST00000359060 SLC26A8Q96RN1 970 aa14.11□□□□□ -0.15
SSU72-202ENST00000359060 AMPHP49418 695 aa14.1□□□□□ -0.15
SSU72-202ENST00000359060 ANKRD45Q5TZF3 282 aa14.1□□□□□ -0.15
SSU72-202ENST00000359060 NME9Q86XW9 330 aa14.1□□□□□ -0.15
SSU72-202ENST00000359060 SSH1Q8WYL5 1049 aa14.1□□□□□ -0.15
SSU72-202ENST00000359060 LNPKQ9C0E8 428 aa14.1□□□□□ -0.15
SSU72-202ENST00000359060 EMILIN1Q9Y6C2 1016 aa14.1□□□□□ -0.15
SSU72-202ENST00000359060 MVPQ14764 893 aaKnown RBP14.1□□□□□ -0.15
SSU72-202ENST00000359060 KIF16BQ96L93 1317 aa14.09□□□□□ -0.15
SSU72-202ENST00000359060 TET3O43151 1660 aa14.09□□□□□ -0.15
SSU72-202ENST00000359060 ATF7IPQ6VMQ6 1270 aa14.09□□□□□ -0.15
SSU72-202ENST00000359060 NUDT16Q96DE0 195 aaKnown RBP14.09□□□□□ -0.15
SSU72-202ENST00000359060 A0A1W2PP64 1363 aa14.08□□□□□ -0.16
SSU72-202ENST00000359060 INSRP06213 1382 aa14.08□□□□□ -0.16
SSU72-202ENST00000359060 SLC4A10Q6U841 1118 aa14.08□□□□□ -0.16
SSU72-202ENST00000359060 RLBP1P12271 317 aa14.08□□□□□ -0.16
SSU72-202ENST00000359060 GNAI1P63096 354 aa14.08□□□□□ -0.16
SSU72-202ENST00000359060 HSCBQ8IWL3 235 aa14.08□□□□□ -0.16
SSU72-202ENST00000359060 YEATS2Q9ULM3 1422 aa14.07□□□□□ -0.16
SSU72-202ENST00000359060 KDM5AP29375 1690 aaKnown RBP14.07□□□□□ -0.16
SSU72-202ENST00000359060 CCDC61Q9Y6R9 512 aa14.07□□□□□ -0.16
SSU72-202ENST00000359060 ZNF521Q96K83 1311 aa14.07□□□□□ -0.16
SSU72-202ENST00000359060 MADDQ8WXG6 1647 aa14.07□□□□□ -0.16
SSU72-202ENST00000359060 FCHSD2O94868 740 aa14.07□□□□□ -0.16
SSU72-202ENST00000359060 SPHKAPQ2M3C7 1700 aa14.07□□□□□ -0.16
SSU72-202ENST00000359060 C1orf115Q9H7X2 142 aa14.07□□□□□ -0.16
SSU72-202ENST00000359060 ARAP3Q8WWN8 1544 aa14.07□□□□□ -0.16
SSU72-202ENST00000359060 HSP90AB1P08238 724 aaKnown RBP14.06□□□□□ -0.16
SSU72-202ENST00000359060 USP35Q9P2H5 1018 aa14.06□□□□□ -0.16
SSU72-202ENST00000359060 PCDHB15Q9Y5E8 787 aa14.06□□□□□ -0.16
SSU72-202ENST00000359060 NSD2O96028 1365 aa14.06□□□□□ -0.16
SSU72-202ENST00000359060 NINLQ9Y2I6 1382 aa14.06□□□□□ -0.16
SSU72-202ENST00000359060 AAMPQ13685 434 aa14.06□□□□□ -0.16
SSU72-202ENST00000359060 NFKBIBQ15653 356 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms