RNA–Protein interactions for RNA: ENST00000358966.6

GGPS1-202, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GGPS1, Length 2,740 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-202ENST00000358966 SRPK2P78362 688 aaKnown RBP17.02■□□□□ 0.31
GGPS1-202ENST00000358966 RBM19Q9Y4C8 960 aaKnown RBP17.02■□□□□ 0.31
GGPS1-202ENST00000358966 METP08581 1390 aa17.02■□□□□ 0.31
GGPS1-202ENST00000358966 LTKP29376 864 aa17.01■□□□□ 0.31
GGPS1-202ENST00000358966 IRX6P78412 446 aaPredicted RBP17.01■□□□□ 0.31
GGPS1-202ENST00000358966 C3P01024 1663 aa17■□□□□ 0.31
GGPS1-202ENST00000358966 FER1L4A9Z1Z3 1794 aa17■□□□□ 0.31
GGPS1-202ENST00000358966 PPP2R1AP30153 589 aa17■□□□□ 0.31
GGPS1-202ENST00000358966 FKBP8Q14318 412 aa17■□□□□ 0.31
GGPS1-202ENST00000358966 NRXN3Q9Y4C0 1643 aa16.99■□□□□ 0.31
GGPS1-202ENST00000358966 NSD3Q9BZ95 1437 aa16.99■□□□□ 0.31
GGPS1-202ENST00000358966 ZBED9Q6R2W3 1325 aa16.99■□□□□ 0.31
GGPS1-202ENST00000358966 EVC2Q86UK5 1308 aa16.99■□□□□ 0.31
GGPS1-202ENST00000358966 UBR1Q8IWV7 1749 aa16.99■□□□□ 0.31
GGPS1-202ENST00000358966 TXNDC2Q86VQ3 553 aa16.99■□□□□ 0.31
GGPS1-202ENST00000358966 MSH5O43196 834 aa16.98■□□□□ 0.31
GGPS1-202ENST00000358966 SETD1AO15047 1707 aaKnown RBP16.97■□□□□ 0.31
GGPS1-202ENST00000358966 LRPPRCP42704 1394 aaKnown RBP16.97■□□□□ 0.31
GGPS1-202ENST00000358966 TMEM2Q9UHN6 1383 aa16.97■□□□□ 0.31
GGPS1-202ENST00000358966 SLC26A8Q96RN1 970 aa16.97■□□□□ 0.31
GGPS1-202ENST00000358966 DEKP35659 375 aaKnown RBP16.96■□□□□ 0.3
GGPS1-202ENST00000358966 NCKAP5LQ9HCH0 1330 aa16.93■□□□□ 0.3
GGPS1-202ENST00000358966 CDK19Q9BWU1 502 aa16.93■□□□□ 0.3
GGPS1-202ENST00000358966 ADAMTS8Q9UP79 889 aa16.93■□□□□ 0.3
GGPS1-202ENST00000358966 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.92■□□□□ 0.3
GGPS1-202ENST00000358966 A0A1W2PP64 1363 aa16.91■□□□□ 0.3
GGPS1-202ENST00000358966 NUTM2FA1L443 756 aa16.9■□□□□ 0.3
GGPS1-202ENST00000358966 RIMS1Q86UR5 1692 aaKnown RBP16.9■□□□□ 0.3
GGPS1-202ENST00000358966 CABP1Q9NZU7 370 aa16.9■□□□□ 0.3
GGPS1-202ENST00000358966 ADAMTS13Q76LX8 1427 aa16.89■□□□□ 0.29
GGPS1-202ENST00000358966 MORC1Q86VD1 984 aa16.89■□□□□ 0.29
GGPS1-202ENST00000358966 CCDC146Q8IYE0 955 aa16.89■□□□□ 0.29
GGPS1-202ENST00000358966 NLRP1Q9C000 1473 aa16.88■□□□□ 0.29
GGPS1-202ENST00000358966 GGNBP2Q9H3C7 697 aa16.88■□□□□ 0.29
GGPS1-202ENST00000358966 ANKRD36BQ8N2N9 1353 aa16.87■□□□□ 0.29
GGPS1-202ENST00000358966 ABCC11Q96J66 1382 aa16.87■□□□□ 0.29
GGPS1-202ENST00000358966 ROBO2Q9HCK4 1378 aa16.87■□□□□ 0.29
GGPS1-202ENST00000358966 NPC1L1Q9UHC9 1359 aa16.86■□□□□ 0.29
GGPS1-202ENST00000358966 NEFLP07196 543 aa16.86■□□□□ 0.29
GGPS1-202ENST00000358966 ERICH6BQ5W0A0 696 aa16.86■□□□□ 0.29
GGPS1-202ENST00000358966 CDCA7LQ96GN5 454 aa16.86■□□□□ 0.29
GGPS1-202ENST00000358966 HDGFP51858 240 aaKnown RBP16.85■□□□□ 0.29
GGPS1-202ENST00000358966 WDR43Q15061 677 aaKnown RBP eCLIP16.85■□□□□ 0.29
GGPS1-202ENST00000358966 CD163L1Q9NR16 1453 aa16.85■□□□□ 0.29
GGPS1-202ENST00000358966 FBLN1P23142 703 aa16.85■□□□□ 0.29
GGPS1-202ENST00000358966 CGNL1Q0VF96 1302 aa16.85■□□□□ 0.29
GGPS1-202ENST00000358966 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.84■□□□□ 0.29
GGPS1-202ENST00000358966 EID1Q9Y6B2 187 aa16.84■□□□□ 0.29
GGPS1-202ENST00000358966 PLEKHG5O94827 1062 aa16.84■□□□□ 0.29
GGPS1-202ENST00000358966 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.83■□□□□ 0.29
GGPS1-202ENST00000358966 PTPRUQ92729 1446 aa16.83■□□□□ 0.28
GGPS1-202ENST00000358966 ATAD2Q6PL18 1390 aa16.83■□□□□ 0.28
GGPS1-202ENST00000358966 PLEKHG1Q9ULL1 1385 aa16.82■□□□□ 0.28
GGPS1-202ENST00000358966 DLC1Q96QB1 1528 aa16.82■□□□□ 0.28
GGPS1-202ENST00000358966 BLMP54132 1417 aaPredicted RBP16.81■□□□□ 0.28
GGPS1-202ENST00000358966 WASLO00401 505 aaPredicted RBP16.81■□□□□ 0.28
GGPS1-202ENST00000358966 MTHFSP49914 203 aa16.81■□□□□ 0.28
GGPS1-202ENST00000358966 RBM33Q96EV2 1170 aaKnown RBP16.81■□□□□ 0.28
GGPS1-202ENST00000358966 THEMISQ8N1K5 641 aaPredicted RBP16.81■□□□□ 0.28
GGPS1-202ENST00000358966 NUDCQ9Y266 331 aa16.81■□□□□ 0.28
GGPS1-202ENST00000358966 FYB1O15117 783 aa16.79■□□□□ 0.28
GGPS1-202ENST00000358966 PKNOX2Q96KN3 472 aa16.79■□□□□ 0.28
GGPS1-202ENST00000358966 DAXXQ9UER7 740 aaPredicted RBP16.79■□□□□ 0.28
GGPS1-202ENST00000358966 AMOTL2Q9Y2J4 779 aa16.79■□□□□ 0.28
GGPS1-202ENST00000358966 PRR36Q9H6K5 1346 aa16.79■□□□□ 0.28
GGPS1-202ENST00000358966 PUS7Q96PZ0 661 aaKnown RBP16.79■□□□□ 0.28
GGPS1-202ENST00000358966 TERF2IPQ9NYB0 399 aa16.79■□□□□ 0.28
GGPS1-202ENST00000358966 ARHGAP23Q9P227 1491 aa16.78■□□□□ 0.28
GGPS1-202ENST00000358966 CEP170BQ9Y4F5 1589 aaPredicted RBP16.78■□□□□ 0.28
GGPS1-202ENST00000358966 SMG6Q86US8 1419 aaKnown RBP16.78■□□□□ 0.28
GGPS1-202ENST00000358966 NUDT16Q96DE0 195 aaKnown RBP16.78■□□□□ 0.28
GGPS1-202ENST00000358966 ZRANB1Q9UGI0 708 aa16.78■□□□□ 0.28
GGPS1-202ENST00000358966 SLIT1O75093 1534 aa16.78■□□□□ 0.28
GGPS1-202ENST00000358966 PPIP5K1Q6PFW1 1433 aa16.77■□□□□ 0.28
GGPS1-202ENST00000358966 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.77■□□□□ 0.27
GGPS1-202ENST00000358966 HDGFL2Q7Z4V5 671 aaPredicted RBP16.76■□□□□ 0.27
GGPS1-202ENST00000358966 CPS1P31327 1500 aa16.76■□□□□ 0.27
GGPS1-202ENST00000358966 TECPR2O15040 1411 aa16.76■□□□□ 0.27
GGPS1-202ENST00000358966 APAF1O14727 1248 aa16.76■□□□□ 0.27
GGPS1-202ENST00000358966 MED14O60244 1454 aa16.75■□□□□ 0.27
GGPS1-202ENST00000358966 USP32Q8NFA0 1604 aa16.75■□□□□ 0.27
GGPS1-202ENST00000358966 KNDC1Q76NI1 1749 aa16.75■□□□□ 0.27
GGPS1-202ENST00000358966 ADAMTSL3P82987 1691 aa16.74■□□□□ 0.27
GGPS1-202ENST00000358966 FAM135BQ49AJ0 1406 aa16.74■□□□□ 0.27
GGPS1-202ENST00000358966 KCNA6P17658 529 aa16.74■□□□□ 0.27
GGPS1-202ENST00000358966 NEUROD2Q15784 382 aa16.74■□□□□ 0.27
GGPS1-202ENST00000358966 NME9Q86XW9 330 aa16.74■□□□□ 0.27
GGPS1-202ENST00000358966 NINLQ9Y2I6 1382 aa16.73■□□□□ 0.27
GGPS1-202ENST00000358966 PPM1GO15355 546 aaPredicted RBP16.73■□□□□ 0.27
GGPS1-202ENST00000358966 RRP7AQ9Y3A4 280 aaKnown RBP16.73■□□□□ 0.27
GGPS1-202ENST00000358966 SHPRHQ149N8 1683 aa16.72■□□□□ 0.27
GGPS1-202ENST00000358966 POLR3AO14802 1390 aaPredicted RBP16.72■□□□□ 0.27
GGPS1-202ENST00000358966 ATP7BP35670 1465 aa16.72■□□□□ 0.27
GGPS1-202ENST00000358966 DMRT2Q9Y5R5 561 aa16.71■□□□□ 0.27
GGPS1-202ENST00000358966 CCDC61Q9Y6R9 512 aa16.71■□□□□ 0.27
GGPS1-202ENST00000358966 PMFBP1Q8TBY8 1022 aa16.7■□□□□ 0.26
GGPS1-202ENST00000358966 TBX22Q9Y458 520 aa16.7■□□□□ 0.26
GGPS1-202ENST00000358966 SPINK5Q9NQ38 1064 aaPredicted RBP16.7■□□□□ 0.26
GGPS1-202ENST00000358966 NSD2O96028 1365 aa16.68■□□□□ 0.26
GGPS1-202ENST00000358966 U2SURPO15042 1029 aaKnown RBP16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms