RNA–Protein interactions for RNA: ENST00000358779.9

CDK11A-204, Transcript of cyclin dependent kinase 11A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDK11A, Length 2,419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-204ENST00000358779 NPM1P06748 294 aaKnown RBP eCLIP23.12■■□□□ 1.29
CDK11A-204ENST00000358779 ARHGEF28Q8N1W1 1705 aaKnown RBP23.11■■□□□ 1.29
CDK11A-204ENST00000358779 SLC12A5Q9H2X9 1139 aa23.11■■□□□ 1.29
CDK11A-204ENST00000358779 IQSEC2Q5JU85 1478 aa23.11■■□□□ 1.29
CDK11A-204ENST00000358779 PIK3C2BO00750 1634 aa23.11■■□□□ 1.29
CDK11A-204ENST00000358779 LAS1LQ9Y4W2 734 aaKnown RBP23.1■■□□□ 1.29
CDK11A-204ENST00000358779 FAM161AQ3B820 660 aa23.1■■□□□ 1.29
CDK11A-204ENST00000358779 WWC1Q8IX03 1113 aa23.1■■□□□ 1.29
CDK11A-204ENST00000358779 TMEM132EQ6IEE7 984 aa23.09■■□□□ 1.29
CDK11A-204ENST00000358779 NINLQ9Y2I6 1382 aa23.09■■□□□ 1.29
CDK11A-204ENST00000358779 C8orf34Q49A92 452 aa23.08■■□□□ 1.28
CDK11A-204ENST00000358779 TNNT2P45379 298 aaPredicted RBP23.07■■□□□ 1.28
CDK11A-204ENST00000358779 NEXMIFQ5QGS0 1516 aa23.07■■□□□ 1.28
CDK11A-204ENST00000358779 TULP4Q9NRJ4 1543 aa23.06■■□□□ 1.28
CDK11A-204ENST00000358779 VIRMAQ69YN4 1812 aaKnown RBP23.06■■□□□ 1.28
CDK11A-204ENST00000358779 RUNDC1Q96C34 613 aa23.06■■□□□ 1.28
CDK11A-204ENST00000358779 CGNL1Q0VF96 1302 aa23.05■■□□□ 1.28
CDK11A-204ENST00000358779 PDE3AQ14432 1141 aa23.04■■□□□ 1.28
CDK11A-204ENST00000358779 PPM1GO15355 546 aaPredicted RBP23.04■■□□□ 1.28
CDK11A-204ENST00000358779 RGS3P49796 1198 aa23.04■■□□□ 1.28
CDK11A-204ENST00000358779 DIP2CQ9Y2E4 1556 aa23.03■■□□□ 1.28
CDK11A-204ENST00000358779 NEFMP07197 916 aa23.02■■□□□ 1.28
CDK11A-204ENST00000358779 USP35Q9P2H5 1018 aa23.02■■□□□ 1.28
CDK11A-204ENST00000358779 CANXP27824 592 aaKnown RBP23.01■■□□□ 1.27
CDK11A-204ENST00000358779 EVC2Q86UK5 1308 aa23.01■■□□□ 1.27
CDK11A-204ENST00000358779 PUS7Q96PZ0 661 aaKnown RBP23.01■■□□□ 1.27
CDK11A-204ENST00000358779 RRP7AQ9Y3A4 280 aaKnown RBP23.01■■□□□ 1.27
CDK11A-204ENST00000358779 ANKRD36BQ8N2N9 1353 aa23.01■■□□□ 1.27
CDK11A-204ENST00000358779 NEO1Q92859 1461 aa23.01■■□□□ 1.27
CDK11A-204ENST00000358779 NEUROD2Q15784 382 aa23■■□□□ 1.27
CDK11A-204ENST00000358779 TCP11L2Q8N4U5 519 aa23■■□□□ 1.27
CDK11A-204ENST00000358779 NSD2O96028 1365 aa23■■□□□ 1.27
CDK11A-204ENST00000358779 MTHFSP49914 203 aa22.99■■□□□ 1.27
CDK11A-204ENST00000358779 CFAP53Q96M91 514 aa22.99■■□□□ 1.27
CDK11A-204ENST00000358779 PHF23Q9BUL5 403 aaPredicted RBP22.99■■□□□ 1.27
CDK11A-204ENST00000358779 VGFO15240 615 aaPredicted RBP22.98■■□□□ 1.27
CDK11A-204ENST00000358779 IGHDP01880 384 aa22.98■■□□□ 1.27
CDK11A-204ENST00000358779 NUTM2DQ5VT03 806 aaPredicted RBP22.98■■□□□ 1.27
CDK11A-204ENST00000358779 PANK1Q8TE04 598 aa22.98■■□□□ 1.27
CDK11A-204ENST00000358779 CLUAP1Q96AJ1 413 aa22.98■■□□□ 1.27
CDK11A-204ENST00000358779 WDR63Q8IWG1 891 aa22.97■■□□□ 1.27
CDK11A-204ENST00000358779 COG6Q9Y2V7 657 aa22.97■■□□□ 1.27
CDK11A-204ENST00000358779 ARHGAP31Q2M1Z3 1444 aa22.96■■□□□ 1.27
CDK11A-204ENST00000358779 ADGRB2O60241 1585 aa22.95■■□□□ 1.27
CDK11A-204ENST00000358779 RARSP54136 660 aaKnown RBP22.95■■□□□ 1.26
CDK11A-204ENST00000358779 RICTORQ6R327 1708 aa22.95■■□□□ 1.26
CDK11A-204ENST00000358779 MYO5BQ9ULV0 1848 aa22.95■■□□□ 1.26
CDK11A-204ENST00000358779 RAPGEF3O95398 923 aa22.94■■□□□ 1.26
CDK11A-204ENST00000358779 CCDC27Q2M243 656 aa22.94■■□□□ 1.26
CDK11A-204ENST00000358779 FRAT1Q92837 279 aaPredicted RBP22.93■■□□□ 1.26
CDK11A-204ENST00000358779 OSCARQ8IYS5 282 aa22.93■■□□□ 1.26
CDK11A-204ENST00000358779 DAXXQ9UER7 740 aaPredicted RBP22.92■■□□□ 1.26
CDK11A-204ENST00000358779 ZFYVE9O95405 1425 aa22.91■■□□□ 1.26
CDK11A-204ENST00000358779 SLC4A3P48751 1232 aa22.91■■□□□ 1.26
CDK11A-204ENST00000358779 CABP2Q9NPB3 220 aa22.91■■□□□ 1.26
CDK11A-204ENST00000358779 MAPK8IP3Q9UPT6 1336 aa22.9■■□□□ 1.26
CDK11A-204ENST00000358779 PREX1Q8TCU6 1659 aa22.9■■□□□ 1.26
CDK11A-204ENST00000358779 ANKRD26Q9UPS8 1709 aa22.89■■□□□ 1.26
CDK11A-204ENST00000358779 NCBP3Q53F19 620 aaKnown RBP22.89■■□□□ 1.26
CDK11A-204ENST00000358779 A0A1W2PP64 1363 aa22.88■■□□□ 1.25
CDK11A-204ENST00000358779 ABCC11Q96J66 1382 aa22.88■■□□□ 1.25
CDK11A-204ENST00000358779 IDI1Q13907 227 aa22.88■■□□□ 1.25
CDK11A-204ENST00000358779 U2AF1L5P0DN76 240 aaPredicted RBP22.88■■□□□ 1.25
CDK11A-204ENST00000358779 U2AF1Q01081 240 aaKnown RBP eCLIP22.88■■□□□ 1.25
CDK11A-204ENST00000358779 AAMPQ13685 434 aa22.88■■□□□ 1.25
CDK11A-204ENST00000358779 SAFB2Q14151 953 aaKnown RBP eCLIP22.88■■□□□ 1.252e-7■■■□□ 15.1
CDK11A-204ENST00000358779 MYH16Q9H6N6 1097 aa22.87■■□□□ 1.25
CDK11A-204ENST00000358779 TMEM131LA2VDJ0 1609 aa22.87■■□□□ 1.25
CDK11A-204ENST00000358779 CLTCQ00610 1675 aaKnown RBP22.86■■□□□ 1.25
CDK11A-204ENST00000358779 RLBP1P12271 317 aa22.86■■□□□ 1.25
CDK11A-204ENST00000358779 PTPRMP28827 1452 aa22.85■■□□□ 1.25
CDK11A-204ENST00000358779 PMFBP1Q8TBY8 1022 aa22.85■■□□□ 1.25
CDK11A-204ENST00000358779 BCL2L13Q9BXK5 485 aa22.85■■□□□ 1.25
CDK11A-204ENST00000358779 TNNQ9UQP3 1299 aa22.85■■□□□ 1.25
CDK11A-204ENST00000358779 SLC52A1Q9NWF4 448 aa22.84■■□□□ 1.25
CDK11A-204ENST00000358779 COL3A1P02461 1466 aaPredicted RBP22.84■■□□□ 1.25
CDK11A-204ENST00000358779 YEATS2Q9ULM3 1422 aa22.83■■□□□ 1.25
CDK11A-204ENST00000358779 STK26Q9P289 416 aa22.83■■□□□ 1.25
CDK11A-204ENST00000358779 SRPK2P78362 688 aaKnown RBP22.82■■□□□ 1.24
CDK11A-204ENST00000358779 NFKBIBQ15653 356 aa22.82■■□□□ 1.24
CDK11A-204ENST00000358779 ATAD2Q6PL18 1390 aa22.81■■□□□ 1.24
CDK11A-204ENST00000358779 PCDHB15Q9Y5E8 787 aa22.81■■□□□ 1.24
CDK11A-204ENST00000358779 USP19O94966 1318 aa22.81■■□□□ 1.24
CDK11A-204ENST00000358779 MED14O60244 1454 aa22.79■■□□□ 1.24
CDK11A-204ENST00000358779 GGNBP2Q9H3C7 697 aa22.79■■□□□ 1.24
CDK11A-204ENST00000358779 CD163L1Q9NR16 1453 aa22.79■■□□□ 1.24
CDK11A-204ENST00000358779 SENP3Q9H4L4 574 aaPredicted RBP22.79■■□□□ 1.24
CDK11A-204ENST00000358779 YTHDC2Q9H6S0 1430 aaKnown RBP22.78■■□□□ 1.24
CDK11A-204ENST00000358779 ZMYM3Q14202 1370 aa22.78■■□□□ 1.24
CDK11A-204ENST00000358779 NLRP1Q9C000 1473 aa22.77■■□□□ 1.24
CDK11A-204ENST00000358779 KIF20BQ96Q89 1820 aa22.77■■□□□ 1.24
CDK11A-204ENST00000358779 PLEKHF1Q96S99 279 aa22.77■■□□□ 1.24
CDK11A-204ENST00000358779 MINK1Q8N4C8 1332 aaPredicted RBP22.77■■□□□ 1.24
CDK11A-204ENST00000358779 U2SURPO15042 1029 aaKnown RBP22.77■■□□□ 1.24
CDK11A-204ENST00000358779 CT47B1P0C2W7 299 aaPredicted RBP22.77■■□□□ 1.24
CDK11A-204ENST00000358779 TERF2IPQ9NYB0 399 aa22.76■■□□□ 1.23
CDK11A-204ENST00000358779 MVPQ14764 893 aaKnown RBP22.76■■□□□ 1.23
CDK11A-204ENST00000358779 SEC24BO95487 1268 aa22.75■■□□□ 1.23
CDK11A-204ENST00000358779 ZKSCAN2Q63HK3 967 aa22.75■■□□□ 1.23
CDK11A-204ENST00000358779 TSR2Q969E8 191 aaKnown RBP22.75■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms