RNA–Protein interactions for RNA: ENST00000358779.9

CDK11A-204, Transcript of cyclin dependent kinase 11A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDK11A, Length 2,419 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-204ENST00000358779 NPM1P06748 294 aaKnown RBP eCLIP23.12■■□□□ 1.29
CDK11A-204ENST00000358779 ARHGEF28Q8N1W1 1705 aaKnown RBP23.11■■□□□ 1.29
CDK11A-204ENST00000358779 SLC12A5Q9H2X9 1139 aa23.11■■□□□ 1.29
CDK11A-204ENST00000358779 IQSEC2Q5JU85 1478 aa23.11■■□□□ 1.29
CDK11A-204ENST00000358779 PIK3C2BO00750 1634 aa23.11■■□□□ 1.29
CDK11A-204ENST00000358779 LAS1LQ9Y4W2 734 aaKnown RBP23.1■■□□□ 1.29
CDK11A-204ENST00000358779 FAM161AQ3B820 660 aa23.1■■□□□ 1.29
CDK11A-204ENST00000358779 WWC1Q8IX03 1113 aa23.1■■□□□ 1.29
CDK11A-204ENST00000358779 TMEM132EQ6IEE7 984 aa23.09■■□□□ 1.29
CDK11A-204ENST00000358779 NINLQ9Y2I6 1382 aa23.09■■□□□ 1.29
CDK11A-204ENST00000358779 C8orf34Q49A92 452 aa23.08■■□□□ 1.28
CDK11A-204ENST00000358779 TNNT2P45379 298 aaPredicted RBP23.07■■□□□ 1.28
CDK11A-204ENST00000358779 NEXMIFQ5QGS0 1516 aa23.07■■□□□ 1.28
CDK11A-204ENST00000358779 TULP4Q9NRJ4 1543 aa23.06■■□□□ 1.28
CDK11A-204ENST00000358779 VIRMAQ69YN4 1812 aaKnown RBP23.06■■□□□ 1.28
CDK11A-204ENST00000358779 RUNDC1Q96C34 613 aa23.06■■□□□ 1.28
CDK11A-204ENST00000358779 CGNL1Q0VF96 1302 aa23.05■■□□□ 1.28
CDK11A-204ENST00000358779 PDE3AQ14432 1141 aa23.04■■□□□ 1.28
CDK11A-204ENST00000358779 PPM1GO15355 546 aaPredicted RBP23.04■■□□□ 1.28
CDK11A-204ENST00000358779 RGS3P49796 1198 aa23.04■■□□□ 1.28
CDK11A-204ENST00000358779 DIP2CQ9Y2E4 1556 aa23.03■■□□□ 1.28
CDK11A-204ENST00000358779 NEFMP07197 916 aa23.02■■□□□ 1.28
CDK11A-204ENST00000358779 USP35Q9P2H5 1018 aa23.02■■□□□ 1.28
CDK11A-204ENST00000358779 CANXP27824 592 aaKnown RBP23.01■■□□□ 1.27
CDK11A-204ENST00000358779 EVC2Q86UK5 1308 aa23.01■■□□□ 1.27
CDK11A-204ENST00000358779 PUS7Q96PZ0 661 aaKnown RBP23.01■■□□□ 1.27
CDK11A-204ENST00000358779 RRP7AQ9Y3A4 280 aaKnown RBP23.01■■□□□ 1.27
CDK11A-204ENST00000358779 ANKRD36BQ8N2N9 1353 aa23.01■■□□□ 1.27
CDK11A-204ENST00000358779 NEO1Q92859 1461 aa23.01■■□□□ 1.27
CDK11A-204ENST00000358779 NEUROD2Q15784 382 aa23■■□□□ 1.27
CDK11A-204ENST00000358779 TCP11L2Q8N4U5 519 aa23■■□□□ 1.27
CDK11A-204ENST00000358779 NSD2O96028 1365 aa23■■□□□ 1.27
CDK11A-204ENST00000358779 MTHFSP49914 203 aa22.99■■□□□ 1.27
CDK11A-204ENST00000358779 CFAP53Q96M91 514 aa22.99■■□□□ 1.27
CDK11A-204ENST00000358779 PHF23Q9BUL5 403 aaPredicted RBP22.99■■□□□ 1.27
CDK11A-204ENST00000358779 VGFO15240 615 aaPredicted RBP22.98■■□□□ 1.27
CDK11A-204ENST00000358779 IGHDP01880 384 aa22.98■■□□□ 1.27
CDK11A-204ENST00000358779 NUTM2DQ5VT03 806 aaPredicted RBP22.98■■□□□ 1.27
CDK11A-204ENST00000358779 PANK1Q8TE04 598 aa22.98■■□□□ 1.27
CDK11A-204ENST00000358779 CLUAP1Q96AJ1 413 aa22.98■■□□□ 1.27
CDK11A-204ENST00000358779 WDR63Q8IWG1 891 aa22.97■■□□□ 1.27
CDK11A-204ENST00000358779 COG6Q9Y2V7 657 aa22.97■■□□□ 1.27
CDK11A-204ENST00000358779 ARHGAP31Q2M1Z3 1444 aa22.96■■□□□ 1.27
CDK11A-204ENST00000358779 ADGRB2O60241 1585 aa22.95■■□□□ 1.27
CDK11A-204ENST00000358779 RARSP54136 660 aaKnown RBP22.95■■□□□ 1.26
CDK11A-204ENST00000358779 RICTORQ6R327 1708 aa22.95■■□□□ 1.26
CDK11A-204ENST00000358779 MYO5BQ9ULV0 1848 aa22.95■■□□□ 1.26
CDK11A-204ENST00000358779 RAPGEF3O95398 923 aa22.94■■□□□ 1.26
CDK11A-204ENST00000358779 CCDC27Q2M243 656 aa22.94■■□□□ 1.26
CDK11A-204ENST00000358779 FRAT1Q92837 279 aaPredicted RBP22.93■■□□□ 1.26
CDK11A-204ENST00000358779 OSCARQ8IYS5 282 aa22.93■■□□□ 1.26
CDK11A-204ENST00000358779 DAXXQ9UER7 740 aaPredicted RBP22.92■■□□□ 1.26
CDK11A-204ENST00000358779 ZFYVE9O95405 1425 aa22.91■■□□□ 1.26
CDK11A-204ENST00000358779 SLC4A3P48751 1232 aa22.91■■□□□ 1.26
CDK11A-204ENST00000358779 CABP2Q9NPB3 220 aa22.91■■□□□ 1.26
CDK11A-204ENST00000358779 MAPK8IP3Q9UPT6 1336 aa22.9■■□□□ 1.26
CDK11A-204ENST00000358779 PREX1Q8TCU6 1659 aa22.9■■□□□ 1.26
CDK11A-204ENST00000358779 ANKRD26Q9UPS8 1709 aa22.89■■□□□ 1.26
CDK11A-204ENST00000358779 NCBP3Q53F19 620 aaKnown RBP22.89■■□□□ 1.26
CDK11A-204ENST00000358779 A0A1W2PP64 1363 aa22.88■■□□□ 1.25
CDK11A-204ENST00000358779 ABCC11Q96J66 1382 aa22.88■■□□□ 1.25
CDK11A-204ENST00000358779 IDI1Q13907 227 aa22.88■■□□□ 1.25
CDK11A-204ENST00000358779 U2AF1L5P0DN76 240 aaPredicted RBP22.88■■□□□ 1.25
CDK11A-204ENST00000358779 U2AF1Q01081 240 aaKnown RBP eCLIP22.88■■□□□ 1.25
CDK11A-204ENST00000358779 AAMPQ13685 434 aa22.88■■□□□ 1.25
CDK11A-204ENST00000358779 SAFB2Q14151 953 aaKnown RBP eCLIP22.88■■□□□ 1.252e-7■■■□□ 15.1
CDK11A-204ENST00000358779 MYH16Q9H6N6 1097 aa22.87■■□□□ 1.25
CDK11A-204ENST00000358779 TMEM131LA2VDJ0 1609 aa22.87■■□□□ 1.25
CDK11A-204ENST00000358779 CLTCQ00610 1675 aaKnown RBP22.86■■□□□ 1.25
CDK11A-204ENST00000358779 RLBP1P12271 317 aa22.86■■□□□ 1.25
CDK11A-204ENST00000358779 PTPRMP28827 1452 aa22.85■■□□□ 1.25
CDK11A-204ENST00000358779 PMFBP1Q8TBY8 1022 aa22.85■■□□□ 1.25
CDK11A-204ENST00000358779 BCL2L13Q9BXK5 485 aa22.85■■□□□ 1.25
CDK11A-204ENST00000358779 TNNQ9UQP3 1299 aa22.85■■□□□ 1.25
CDK11A-204ENST00000358779 SLC52A1Q9NWF4 448 aa22.84■■□□□ 1.25
CDK11A-204ENST00000358779 COL3A1P02461 1466 aaPredicted RBP22.84■■□□□ 1.25
CDK11A-204ENST00000358779 YEATS2Q9ULM3 1422 aa22.83■■□□□ 1.25
CDK11A-204ENST00000358779 STK26Q9P289 416 aa22.83■■□□□ 1.25
CDK11A-204ENST00000358779 SRPK2P78362 688 aaKnown RBP22.82■■□□□ 1.24
CDK11A-204ENST00000358779 NFKBIBQ15653 356 aa22.82■■□□□ 1.24
CDK11A-204ENST00000358779 ATAD2Q6PL18 1390 aa22.81■■□□□ 1.24
CDK11A-204ENST00000358779 PCDHB15Q9Y5E8 787 aa22.81■■□□□ 1.24
CDK11A-204ENST00000358779 USP19O94966 1318 aa22.81■■□□□ 1.24
CDK11A-204ENST00000358779 MED14O60244 1454 aa22.79■■□□□ 1.24
CDK11A-204ENST00000358779 GGNBP2Q9H3C7 697 aa22.79■■□□□ 1.24
CDK11A-204ENST00000358779 CD163L1Q9NR16 1453 aa22.79■■□□□ 1.24
CDK11A-204ENST00000358779 SENP3Q9H4L4 574 aaPredicted RBP22.79■■□□□ 1.24
CDK11A-204ENST00000358779 YTHDC2Q9H6S0 1430 aaKnown RBP22.78■■□□□ 1.24
CDK11A-204ENST00000358779 ZMYM3Q14202 1370 aa22.78■■□□□ 1.24
CDK11A-204ENST00000358779 NLRP1Q9C000 1473 aa22.77■■□□□ 1.24
CDK11A-204ENST00000358779 KIF20BQ96Q89 1820 aa22.77■■□□□ 1.24
CDK11A-204ENST00000358779 PLEKHF1Q96S99 279 aa22.77■■□□□ 1.24
CDK11A-204ENST00000358779 MINK1Q8N4C8 1332 aaPredicted RBP22.77■■□□□ 1.24
CDK11A-204ENST00000358779 U2SURPO15042 1029 aaKnown RBP22.77■■□□□ 1.24
CDK11A-204ENST00000358779 CT47B1P0C2W7 299 aaPredicted RBP22.77■■□□□ 1.24
CDK11A-204ENST00000358779 TERF2IPQ9NYB0 399 aa22.76■■□□□ 1.23
CDK11A-204ENST00000358779 MVPQ14764 893 aaKnown RBP22.76■■□□□ 1.23
CDK11A-204ENST00000358779 SEC24BO95487 1268 aa22.75■■□□□ 1.23
CDK11A-204ENST00000358779 ZKSCAN2Q63HK3 967 aa22.75■■□□□ 1.23
CDK11A-204ENST00000358779 TSR2Q969E8 191 aaKnown RBP22.75■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms