RNA–Protein interactions for RNA: ENST00000358771.4

SIRPA-202, Transcript of signal regulatory protein alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SIRPA, Length 3,996 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-202ENST00000358771 PLEKHH1Q9ULM0 1364 aa18.06■□□□□ 0.48
SIRPA-202ENST00000358771 BACH2Q9BYV9 841 aa18.06■□□□□ 0.48
SIRPA-202ENST00000358771 RTN4Q9NQC3 1192 aaKnown RBP18.06■□□□□ 0.48
SIRPA-202ENST00000358771 LRPPRCP42704 1394 aaKnown RBP18.05■□□□□ 0.48
SIRPA-202ENST00000358771 AMPHP49418 695 aa18.04■□□□□ 0.48
SIRPA-202ENST00000358771 NUTM2GQ5VZR2 741 aa18.04■□□□□ 0.48
SIRPA-202ENST00000358771 GPRASP1Q5JY77 1395 aa18.04■□□□□ 0.48
SIRPA-202ENST00000358771 KDM5CP41229 1560 aa18.04■□□□□ 0.48
SIRPA-202ENST00000358771 RTEL1-TNFRSF6BF6WH68 1400 aa18.03■□□□□ 0.48
SIRPA-202ENST00000358771 THUMPD2Q9BTF0 503 aaKnown RBP18.03■□□□□ 0.48
SIRPA-202ENST00000358771 RRS1Q15050 365 aaKnown RBP18.03■□□□□ 0.48
SIRPA-202ENST00000358771 SLC4A10Q6U841 1118 aa18.03■□□□□ 0.48
SIRPA-202ENST00000358771 ZNF518AQ6AHZ1 1483 aa18.03■□□□□ 0.48
SIRPA-202ENST00000358771 CALD1Q05682 793 aaKnown RBP18.02■□□□□ 0.48
SIRPA-202ENST00000358771 BCORL1Q5H9F3 1711 aa18.01■□□□□ 0.47
SIRPA-202ENST00000358771 MAST1Q9Y2H9 1570 aa18.01■□□□□ 0.47
SIRPA-202ENST00000358771 ATP7AQ04656 1500 aa18■□□□□ 0.47
SIRPA-202ENST00000358771 PREX2Q70Z35 1606 aa18■□□□□ 0.47
SIRPA-202ENST00000358771 MYO5CQ9NQX4 1742 aa17.99■□□□□ 0.47
SIRPA-202ENST00000358771 DMRT2Q9Y5R5 561 aa17.99■□□□□ 0.47
SIRPA-202ENST00000358771 UGGT1Q9NYU2 1555 aa17.99■□□□□ 0.47
SIRPA-202ENST00000358771 CEBPAP49715 358 aaPredicted RBP17.98■□□□□ 0.47
SIRPA-202ENST00000358771 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.98■□□□□ 0.47
SIRPA-202ENST00000358771 TMPOP42166 694 aaKnown RBP17.98■□□□□ 0.47
SIRPA-202ENST00000358771 PDE3AQ14432 1141 aa17.98■□□□□ 0.47
SIRPA-202ENST00000358771 ANKRD45Q5TZF3 282 aa17.98■□□□□ 0.47
SIRPA-202ENST00000358771 ASXL1Q8IXJ9 1541 aa17.98■□□□□ 0.47
SIRPA-202ENST00000358771 NECTIN2Q92692 538 aa17.98■□□□□ 0.47
SIRPA-202ENST00000358771 LNPKQ9C0E8 428 aa17.98■□□□□ 0.47
SIRPA-202ENST00000358771 ATP10AO60312 1499 aa17.97■□□□□ 0.47
SIRPA-202ENST00000358771 CHMP4BQ9H444 224 aaKnown RBP17.97■□□□□ 0.47
SIRPA-202ENST00000358771 ADCY10Q96PN6 1610 aa17.96■□□□□ 0.47
SIRPA-202ENST00000358771 NME9Q86XW9 330 aa17.96■□□□□ 0.47
SIRPA-202ENST00000358771 RARSP54136 660 aaKnown RBP17.96■□□□□ 0.47
SIRPA-202ENST00000358771 DDX19BQ9UMR2 479 aa17.96■□□□□ 0.47
SIRPA-202ENST00000358771 NOB1Q9ULX3 412 aaKnown RBP17.96■□□□□ 0.46
SIRPA-202ENST00000358771 EMILIN1Q9Y6C2 1016 aa17.96■□□□□ 0.46
SIRPA-202ENST00000358771 MAGI2Q86UL8 1455 aa17.95■□□□□ 0.46
SIRPA-202ENST00000358771 WDR63Q8IWG1 891 aa17.95■□□□□ 0.46
SIRPA-202ENST00000358771 C1orf115Q9H7X2 142 aa17.95■□□□□ 0.46
SIRPA-202ENST00000358771 TNNQ9UQP3 1299 aa17.95■□□□□ 0.46
SIRPA-202ENST00000358771 LMOD3Q0VAK6 560 aa17.94■□□□□ 0.46
SIRPA-202ENST00000358771 PDZRN3Q9UPQ7 1066 aa17.94■□□□□ 0.46
SIRPA-202ENST00000358771 ATAD2Q6PL18 1390 aa17.94■□□□□ 0.46
SIRPA-202ENST00000358771 EIF2AK4Q9P2K8 1649 aaKnown RBP17.94■□□□□ 0.46
SIRPA-202ENST00000358771 HSP90AB1P08238 724 aaKnown RBP17.93■□□□□ 0.46
SIRPA-202ENST00000358771 FYB1O15117 783 aa17.93■□□□□ 0.46
SIRPA-202ENST00000358771 NUDT16Q96DE0 195 aaKnown RBP17.93■□□□□ 0.46
SIRPA-202ENST00000358771 CDC42BPBQ9Y5S2 1711 aa17.93■□□□□ 0.46
SIRPA-202ENST00000358771 KDM5DQ9BY66 1539 aa17.92■□□□□ 0.46
SIRPA-202ENST00000358771 SULT6B1Q6IMI4 303 aa17.92■□□□□ 0.46
SIRPA-202ENST00000358771 NKTRP30414 1462 aaKnown RBP17.92■□□□□ 0.46
SIRPA-202ENST00000358771 DCTN1Q14203 1278 aa17.92■□□□□ 0.46
SIRPA-202ENST00000358771 FOXD4L1Q9NU39 408 aa17.92■□□□□ 0.46
SIRPA-202ENST00000358771 ZCCHC11Q5TAX3 1644 aaKnown RBP17.92■□□□□ 0.46
SIRPA-202ENST00000358771 HSCBQ8IWL3 235 aa17.92■□□□□ 0.46
SIRPA-202ENST00000358771 ABCC1P33527 1531 aa17.91■□□□□ 0.46
SIRPA-202ENST00000358771 IGHDP01880 384 aa17.91■□□□□ 0.46
SIRPA-202ENST00000358771 SSH1Q8WYL5 1049 aa17.91■□□□□ 0.46
SIRPA-202ENST00000358771 CCDC61Q9Y6R9 512 aa17.91■□□□□ 0.46
SIRPA-202ENST00000358771 RNF123Q5XPI4 1314 aa17.9■□□□□ 0.46
SIRPA-202ENST00000358771 NCKAP5LQ9HCH0 1330 aa17.9■□□□□ 0.46
SIRPA-202ENST00000358771 A0A0G2JS52 829 aa17.9■□□□□ 0.46
SIRPA-202ENST00000358771 TPRNQ4KMQ1 711 aa17.9■□□□□ 0.46
SIRPA-202ENST00000358771 NPATQ14207 1427 aa17.9■□□□□ 0.46
SIRPA-202ENST00000358771 GZF1Q9H116 711 aaPredicted RBP17.9■□□□□ 0.46
SIRPA-202ENST00000358771 ZRANB1Q9UGI0 708 aa17.89■□□□□ 0.46
SIRPA-202ENST00000358771 NLRP6P59044 892 aa17.89■□□□□ 0.45
SIRPA-202ENST00000358771 RBM33Q96EV2 1170 aaKnown RBP17.89■□□□□ 0.45
SIRPA-202ENST00000358771 GNAI1P63096 354 aa17.89■□□□□ 0.45
SIRPA-202ENST00000358771 STK31Q9BXU1 1019 aa17.89■□□□□ 0.45
SIRPA-202ENST00000358771 HAP1P54257 671 aaPredicted RBP17.89■□□□□ 0.45
SIRPA-202ENST00000358771 KIF16BQ96L93 1317 aa17.88■□□□□ 0.45
SIRPA-202ENST00000358771 ATF7IPQ6VMQ6 1270 aa17.88■□□□□ 0.45
SIRPA-202ENST00000358771 MVPQ14764 893 aaKnown RBP17.87■□□□□ 0.45
SIRPA-202ENST00000358771 UHRF1BP1LA0JNW5 1464 aa17.87■□□□□ 0.45
SIRPA-202ENST00000358771 CROCC2H7BZ55 1655 aa17.86■□□□□ 0.45
SIRPA-202ENST00000358771 TWISTNBQ3B726 338 aaPredicted RBP17.86■□□□□ 0.45
SIRPA-202ENST00000358771 NCLP19338 710 aaKnown RBP17.86■□□□□ 0.45
SIRPA-202ENST00000358771 CASC1Q6TDU7 716 aa17.86■□□□□ 0.45
SIRPA-202ENST00000358771 OS9Q13438 667 aaPredicted RBP17.85■□□□□ 0.45
SIRPA-202ENST00000358771 TMEM57Q8N5G2 664 aa17.85■□□□□ 0.45
SIRPA-202ENST00000358771 WASLO00401 505 aaPredicted RBP17.84■□□□□ 0.45
SIRPA-202ENST00000358771 FCHSD2O94868 740 aa17.84■□□□□ 0.45
SIRPA-202ENST00000358771 RLBP1P12271 317 aa17.84■□□□□ 0.45
SIRPA-202ENST00000358771 ANKRD36BQ8N2N9 1353 aa17.84■□□□□ 0.45
SIRPA-202ENST00000358771 PIK3C2GO75747 1445 aa17.84■□□□□ 0.45
SIRPA-202ENST00000358771 MIS18AQ9NYP9 233 aa17.83■□□□□ 0.44
SIRPA-202ENST00000358771 A0A1W2PP64 1363 aa17.83■□□□□ 0.44
SIRPA-202ENST00000358771 YEATS2Q9ULM3 1422 aa17.82■□□□□ 0.44
SIRPA-202ENST00000358771 FAM83GA6ND36 823 aa17.82■□□□□ 0.44
SIRPA-202ENST00000358771 EIF5BO60841 1220 aaKnown RBP17.82■□□□□ 0.44
SIRPA-202ENST00000358771 EIF2S2P20042 333 aaKnown RBP17.82■□□□□ 0.44
SIRPA-202ENST00000358771 TSPYL4Q9UJ04 414 aa17.82■□□□□ 0.44
SIRPA-202ENST00000358771 PCDHB15Q9Y5E8 787 aa17.82■□□□□ 0.44
SIRPA-202ENST00000358771 POGZQ7Z3K3 1410 aa17.82■□□□□ 0.44
SIRPA-202ENST00000358771 POLR3AO14802 1390 aaPredicted RBP17.82■□□□□ 0.44
SIRPA-202ENST00000358771 TRIM27P14373 513 aa17.82■□□□□ 0.44
SIRPA-202ENST00000358771 NFKBIBQ15653 356 aa17.81■□□□□ 0.44
SIRPA-202ENST00000358771 PTPRTO14522 1441 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms