RNA–Protein interactions for RNA: ENST00000358392.6

COL11A1-202, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL11A1, Length 7,327 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-202ENST00000358392 LEKR1Q6ZMV7 388 aa13.48□□□□□ -0.25
COL11A1-202ENST00000358392 C22orf23Q9BZE7 217 aa13.48□□□□□ -0.25
COL11A1-202ENST00000358392 NAT10Q9H0A0 1025 aaKnown RBP13.48□□□□□ -0.25
COL11A1-202ENST00000358392 PAF1Q8N7H5 531 aa13.47□□□□□ -0.25
COL11A1-202ENST00000358392 SDF4Q9BRK5 362 aa13.47□□□□□ -0.25
COL11A1-202ENST00000358392 FKBP5Q13451 457 aaPredicted RBP13.47□□□□□ -0.25
COL11A1-202ENST00000358392 PKNOX2Q96KN3 472 aa13.47□□□□□ -0.25
COL11A1-202ENST00000358392 BRPF3Q9ULD4 1205 aa13.47□□□□□ -0.25
COL11A1-202ENST00000358392 NUCB2P80303 420 aa13.47□□□□□ -0.25
COL11A1-202ENST00000358392 AIMP1Q12904 312 aaKnown RBP13.47□□□□□ -0.25
COL11A1-202ENST00000358392 DDX19BQ9UMR2 479 aa13.46□□□□□ -0.25
COL11A1-202ENST00000358392 PHLDB1Q86UU1 1377 aa13.46□□□□□ -0.25
COL11A1-202ENST00000358392 ST20-MTHFSA0A0A6YYL1 179 aa13.46□□□□□ -0.25
COL11A1-202ENST00000358392 IKQ13123 557 aaPredicted RBP13.46□□□□□ -0.25
COL11A1-202ENST00000358392 FAM193AP78312 1265 aa13.45□□□□□ -0.26
COL11A1-202ENST00000358392 DZIP1LQ8IYY4 767 aaKnown RBP13.45□□□□□ -0.26
COL11A1-202ENST00000358392 ERCC4Q92889 916 aaPredicted RBP13.45□□□□□ -0.26
COL11A1-202ENST00000358392 ENOX2Q16206 610 aaKnown RBP13.45□□□□□ -0.26
COL11A1-202ENST00000358392 ZNF428Q96B54 188 aa13.45□□□□□ -0.26
COL11A1-202ENST00000358392 RIPK4P57078 832 aa13.45□□□□□ -0.26
COL11A1-202ENST00000358392 RALYLQ86SE5 291 aaKnown RBP13.45□□□□□ -0.26
COL11A1-202ENST00000358392 FAM177A1Q8N128 213 aaPredicted RBP13.45□□□□□ -0.26
COL11A1-202ENST00000358392 CENPHQ9H3R5 247 aa13.45□□□□□ -0.26
COL11A1-202ENST00000358392 CT47B1P0C2W7 299 aaPredicted RBP13.45□□□□□ -0.26
COL11A1-202ENST00000358392 CCDC66A2RUB6 948 aa13.44□□□□□ -0.26
COL11A1-202ENST00000358392 CARMIL1Q5VZK9 1371 aa13.44□□□□□ -0.26
COL11A1-202ENST00000358392 WASHC2CQ9Y4E1 1318 aa13.44□□□□□ -0.26
COL11A1-202ENST00000358392 MYO6Q9UM54 1294 aa13.44□□□□□ -0.26
COL11A1-202ENST00000358392 CUX2O14529 1486 aa13.44□□□□□ -0.26
COL11A1-202ENST00000358392 SOGA1O94964 1423 aa13.44□□□□□ -0.26
COL11A1-202ENST00000358392 BRMS1Q9HCU9 246 aa13.44□□□□□ -0.26
COL11A1-202ENST00000358392 ANKRD30AQ9BXX3 1397 aa13.43□□□□□ -0.26
COL11A1-202ENST00000358392 TSPY26PQ9H489 355 aa13.43□□□□□ -0.26
COL11A1-202ENST00000358392 MINK1Q8N4C8 1332 aaPredicted RBP13.43□□□□□ -0.26
COL11A1-202ENST00000358392 FANCIQ9NVI1 1328 aa13.43□□□□□ -0.26
COL11A1-202ENST00000358392 IL27Q8NEV9 243 aa13.43□□□□□ -0.26
COL11A1-202ENST00000358392 PRPF40AO75400 957 aaKnown RBP13.43□□□□□ -0.26
COL11A1-202ENST00000358392 PANK1Q8TE04 598 aa13.43□□□□□ -0.26
COL11A1-202ENST00000358392 TRAK2O60296 914 aa13.42□□□□□ -0.26
COL11A1-202ENST00000358392 RBM33Q96EV2 1170 aaKnown RBP13.42□□□□□ -0.26
COL11A1-202ENST00000358392 ERICH4A6NGS2 130 aa13.42□□□□□ -0.26
COL11A1-202ENST00000358392 SEPT7Q16181 437 aaKnown RBP13.42□□□□□ -0.26
COL11A1-202ENST00000358392 MAGEC2Q9UBF1 373 aaPredicted RBP13.42□□□□□ -0.26
COL11A1-202ENST00000358392 HMOX1P09601 288 aa13.42□□□□□ -0.26
COL11A1-202ENST00000358392 TAX1BP1Q86VP1 789 aa13.42□□□□□ -0.26
COL11A1-202ENST00000358392 MRE11P49959 708 aa13.41□□□□□ -0.26
COL11A1-202ENST00000358392 FAM177BA6PVY3 158 aa13.41□□□□□ -0.26
COL11A1-202ENST00000358392 SMARCE1Q969G3 411 aa13.41□□□□□ -0.26
COL11A1-202ENST00000358392 SYCP1Q15431 976 aa13.4□□□□□ -0.26
COL11A1-202ENST00000358392 RIC3Q7Z5B4 369 aa13.4□□□□□ -0.26
COL11A1-202ENST00000358392 CDK5RAP3Q96JB5 506 aa13.4□□□□□ -0.26
COL11A1-202ENST00000358392 DDX58O95786 925 aaKnown RBP13.4□□□□□ -0.26
COL11A1-202ENST00000358392 DNAJC2Q99543 621 aaKnown RBP13.4□□□□□ -0.26
COL11A1-202ENST00000358392 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.4□□□□□ -0.26
COL11A1-202ENST00000358392 TSPYL4Q9UJ04 414 aa13.4□□□□□ -0.26
COL11A1-202ENST00000358392 ERC2O15083 957 aa13.39□□□□□ -0.27
COL11A1-202ENST00000358392 IBSPP21815 317 aaPredicted RBP13.39□□□□□ -0.27
COL11A1-202ENST00000358392 ZBED9Q6R2W3 1325 aa13.39□□□□□ -0.27
COL11A1-202ENST00000358392 KIAA0754O94854 1291 aa13.39□□□□□ -0.27
COL11A1-202ENST00000358392 FIBPO43427 364 aa13.39□□□□□ -0.27
COL11A1-202ENST00000358392 GOLGA6L10A6NI86 522 aa13.39□□□□□ -0.27
COL11A1-202ENST00000358392 STK3Q13188 491 aa13.39□□□□□ -0.27
COL11A1-202ENST00000358392 FILIP1LQ4L180 1135 aa13.38□□□□□ -0.27
COL11A1-202ENST00000358392 FMN1Q68DA7 1419 aa13.38□□□□□ -0.27
COL11A1-202ENST00000358392 ROCK1Q13464 1354 aa13.38□□□□□ -0.27
COL11A1-202ENST00000358392 KINO60870 393 aaKnown RBP13.38□□□□□ -0.27
COL11A1-202ENST00000358392 KRT18P05783 430 aaKnown RBP13.38□□□□□ -0.27
COL11A1-202ENST00000358392 SERPINC1P01008 464 aa13.38□□□□□ -0.27
COL11A1-202ENST00000358392 XBP1P17861 261 aa13.38□□□□□ -0.27
COL11A1-202ENST00000358392 DIAPH1O60610 1272 aaKnown RBP13.38□□□□□ -0.27
COL11A1-202ENST00000358392 ZRSR2Q15696 482 aaKnown RBP13.38□□□□□ -0.27
COL11A1-202ENST00000358392 MEX3CQ5U5Q3 659 aaKnown RBP13.37□□□□□ -0.27
COL11A1-202ENST00000358392 FSD1Q9BTV5 496 aa13.37□□□□□ -0.27
COL11A1-202ENST00000358392 ZHX3Q9H4I2 956 aa13.37□□□□□ -0.27
COL11A1-202ENST00000358392 NINLQ9Y2I6 1382 aa13.37□□□□□ -0.27
COL11A1-202ENST00000358392 CCDC181Q5TID7 509 aa13.37□□□□□ -0.27
COL11A1-202ENST00000358392 API5Q9BZZ5 524 aaKnown RBP13.37□□□□□ -0.27
COL11A1-202ENST00000358392 MAP4K4O95819 1239 aaPredicted RBP13.36□□□□□ -0.27
COL11A1-202ENST00000358392 MTERF4Q7Z6M4 381 aaKnown RBP13.36□□□□□ -0.27
COL11A1-202ENST00000358392 CDC45O75419 566 aa13.36□□□□□ -0.27
COL11A1-202ENST00000358392 ERLIN2O94905 339 aa13.36□□□□□ -0.27
COL11A1-202ENST00000358392 C1orf115Q9H7X2 142 aa13.36□□□□□ -0.27
COL11A1-202ENST00000358392 UQCRHLA0A096LP55 91 aa13.36□□□□□ -0.27
COL11A1-202ENST00000358392 UQCRHP07919 91 aa13.36□□□□□ -0.27
COL11A1-202ENST00000358392 CNTROBQ8N137 903 aa13.36□□□□□ -0.27
COL11A1-202ENST00000358392 TANGO6Q9C0B7 1094 aa13.36□□□□□ -0.27
COL11A1-202ENST00000358392 DEF6Q9H4E7 631 aa13.36□□□□□ -0.27
COL11A1-202ENST00000358392 NUTM2GQ5VZR2 741 aa13.35□□□□□ -0.27
COL11A1-202ENST00000358392 EVC2Q86UK5 1308 aa13.35□□□□□ -0.27
COL11A1-202ENST00000358392 PRKRIP1Q9H875 184 aaPredicted RBP13.35□□□□□ -0.27
COL11A1-202ENST00000358392 SEPT11Q9NVA2 429 aaKnown RBP13.35□□□□□ -0.27
COL11A1-202ENST00000358392 LETM1O95202 739 aaPredicted RBP13.35□□□□□ -0.27
COL11A1-202ENST00000358392 PSMA5P28066 241 aa13.35□□□□□ -0.27
COL11A1-202ENST00000358392 ATP2B2Q01814 1243 aa13.35□□□□□ -0.27
COL11A1-202ENST00000358392 CCAR1Q8IX12 1150 aaKnown RBP13.35□□□□□ -0.27
COL11A1-202ENST00000358392 VPS8Q8N3P4 1428 aa13.35□□□□□ -0.27
COL11A1-202ENST00000358392 EFCAB2Q5VUJ9 269 aa13.34□□□□□ -0.27
COL11A1-202ENST00000358392 ABCC8Q09428 1581 aa13.34□□□□□ -0.27
COL11A1-202ENST00000358392 PODXL2Q9NZ53 605 aa13.34□□□□□ -0.27
COL11A1-202ENST00000358392 NEK4P51957 841 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms