RNA–Protein interactions for RNA: ENST00000357508.5

C1orf228-201, Transcript of Uncharacterized protein C1orf228, humanhuman

TSL 1 (best)

Gene C1orf228, Length 2,113 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf228-201ENST00000357508 PPP4R2Q9NY27 417 aa34.78■■■■□ 3.16
C1orf228-201ENST00000357508 ADAMTS8Q9UP79 889 aa34.78■■■■□ 3.16
C1orf228-201ENST00000357508 SALL2Q9Y467 1007 aaPredicted RBP34.78■■■■□ 3.16
C1orf228-201ENST00000357508 EVC2Q86UK5 1308 aa34.77■■■■□ 3.16
C1orf228-201ENST00000357508 NSD3Q9BZ95 1437 aa34.77■■■■□ 3.16
C1orf228-201ENST00000357508 PTPRMP28827 1452 aa34.77■■■■□ 3.16
C1orf228-201ENST00000357508 SLC12A5Q9H2X9 1139 aa34.76■■■■□ 3.16
C1orf228-201ENST00000357508 WDR43Q15061 677 aaKnown RBP eCLIP34.73■■■■□ 3.15
C1orf228-201ENST00000357508 YTHDC2Q9H6S0 1430 aaKnown RBP34.73■■■■□ 3.15
C1orf228-201ENST00000357508 TMEM2Q9UHN6 1383 aa34.73■■■■□ 3.15
C1orf228-201ENST00000357508 ABCF1Q8NE71 845 aaKnown RBP eCLIP34.71■■■■□ 3.15
C1orf228-201ENST00000357508 STK26Q9P289 416 aa34.71■■■■□ 3.15
C1orf228-201ENST00000357508 SETD1AO15047 1707 aaKnown RBP34.7■■■■□ 3.15
C1orf228-201ENST00000357508 HDGFP51858 240 aaKnown RBP34.66■■■■□ 3.14
C1orf228-201ENST00000357508 SAFB2Q14151 953 aaKnown RBP eCLIP34.65■■■■□ 3.14
C1orf228-201ENST00000357508 ANKRD36BQ8N2N9 1353 aa34.64■■■■□ 3.14
C1orf228-201ENST00000357508 CDCA7LQ96GN5 454 aa34.63■■■■□ 3.13
C1orf228-201ENST00000357508 CABP2Q9NPB3 220 aa34.63■■■■□ 3.13
C1orf228-201ENST00000357508 LTKP29376 864 aa34.6■■■■□ 3.13
C1orf228-201ENST00000357508 PRAM1Q96QH2 718 aa34.6■■■■□ 3.13
C1orf228-201ENST00000357508 NRXN3Q9Y4C0 1643 aa34.59■■■■□ 3.13
C1orf228-201ENST00000357508 THEMISQ8N1K5 641 aaPredicted RBP34.59■■■■□ 3.13
C1orf228-201ENST00000357508 POLR3AO14802 1390 aaPredicted RBP34.58■■■■□ 3.13
C1orf228-201ENST00000357508 NINLQ9Y2I6 1382 aa34.58■■■■□ 3.13
C1orf228-201ENST00000357508 CGNL1Q0VF96 1302 aa34.58■■■■□ 3.13
C1orf228-201ENST00000357508 DLC1Q96QB1 1528 aa34.58■■■■□ 3.13
C1orf228-201ENST00000357508 RCAN3Q9UKA8 241 aa34.58■■■■□ 3.13
C1orf228-201ENST00000357508 CEP170BQ9Y4F5 1589 aaPredicted RBP34.57■■■■□ 3.13
C1orf228-201ENST00000357508 MORC1Q86VD1 984 aa34.57■■■■□ 3.12
C1orf228-201ENST00000357508 SHPRHQ149N8 1683 aa34.57■■■■□ 3.12
C1orf228-201ENST00000357508 PLEKHH1Q9ULM0 1364 aa34.57■■■■□ 3.12
C1orf228-201ENST00000357508 SLIT1O75093 1534 aa34.56■■■■□ 3.12
C1orf228-201ENST00000357508 ARHGAP23Q9P227 1491 aa34.56■■■■□ 3.12
C1orf228-201ENST00000357508 TXNDC2Q86VQ3 553 aa34.56■■■■□ 3.12
C1orf228-201ENST00000357508 POGKQ9P215 609 aa34.55■■■■□ 3.12
C1orf228-201ENST00000357508 MINK1Q8N4C8 1332 aaPredicted RBP34.54■■■■□ 3.12
C1orf228-201ENST00000357508 B4GALNT3Q6L9W6 998 aa34.54■■■■□ 3.12
C1orf228-201ENST00000357508 SRPK2P78362 688 aaKnown RBP34.53■■■■□ 3.12
C1orf228-201ENST00000357508 NSD2O96028 1365 aa34.53■■■■□ 3.12
C1orf228-201ENST00000357508 ATAD2Q6PL18 1390 aa34.53■■■■□ 3.12
C1orf228-201ENST00000357508 RRP1P56182 461 aaKnown RBP34.52■■■■□ 3.12
C1orf228-201ENST00000357508 EID1Q9Y6B2 187 aa34.52■■■■□ 3.12
C1orf228-201ENST00000357508 ZNF521Q96K83 1311 aa34.51■■■■□ 3.11
C1orf228-201ENST00000357508 A0A1W2PP64 1363 aa34.5■■■■□ 3.11
C1orf228-201ENST00000357508 SETD1BQ9UPS6 1966 aaKnown RBP34.5■■■■□ 3.11
C1orf228-201ENST00000357508 PLEKHG1Q9ULL1 1385 aa34.49■■■■□ 3.11
C1orf228-201ENST00000357508 ANKRD26Q9UPS8 1709 aa34.47■■■■□ 3.11
C1orf228-201ENST00000357508 METP08581 1390 aa34.47■■■■□ 3.11
C1orf228-201ENST00000357508 CCDC146Q8IYE0 955 aa34.46■■■■□ 3.11
C1orf228-201ENST00000357508 ABCC11Q96J66 1382 aa34.46■■■■□ 3.11
C1orf228-201ENST00000357508 CD163L1Q9NR16 1453 aa34.45■■■■□ 3.11
C1orf228-201ENST00000357508 ZNF142P52746 1687 aaPredicted RBP34.45■■■■□ 3.11
C1orf228-201ENST00000357508 ADAMTS13Q76LX8 1427 aa34.45■■■■□ 3.11
C1orf228-201ENST00000357508 TNNT2P45379 298 aaPredicted RBP34.45■■■■□ 3.1
C1orf228-201ENST00000357508 KNDC1Q76NI1 1749 aa34.43■■■■□ 3.1
C1orf228-201ENST00000357508 CDK19Q9BWU1 502 aa34.4■■■■□ 3.1
C1orf228-201ENST00000357508 APAF1O14727 1248 aa34.39■■■■□ 3.1
C1orf228-201ENST00000357508 GOLGA2Q08379 1002 aa34.39■■■■□ 3.1
C1orf228-201ENST00000357508 DUSP27Q5VZP5 1158 aa34.37■■■■□ 3.09
C1orf228-201ENST00000357508 TERF2IPQ9NYB0 399 aa34.37■■■■□ 3.09
C1orf228-201ENST00000357508 SLC26A8Q96RN1 970 aa34.37■■■■□ 3.09
C1orf228-201ENST00000357508 MTHFSP49914 203 aa34.36■■■■□ 3.09
C1orf228-201ENST00000357508 WAPLQ7Z5K2 1190 aa34.36■■■■□ 3.09
C1orf228-201ENST00000357508 MED14O60244 1454 aa34.36■■■■□ 3.09
C1orf228-201ENST00000357508 KIF20BQ96Q89 1820 aa34.36■■■■□ 3.09
C1orf228-201ENST00000357508 KDM4FA0A1W2PPD8 638 aa34.34■■■■□ 3.09
C1orf228-201ENST00000357508 NGEFQ8N5V2 710 aa34.33■■■■□ 3.09
C1orf228-201ENST00000357508 CCDC136Q96JN2 1154 aa34.33■■■■□ 3.09
C1orf228-201ENST00000357508 SLFN5Q08AF3 891 aa34.31■■■■□ 3.08
C1orf228-201ENST00000357508 CFAP53Q96M91 514 aa34.31■■■■□ 3.08
C1orf228-201ENST00000357508 ANKLE2Q86XL3 938 aa34.31■■■■□ 3.08
C1orf228-201ENST00000357508 CPS1P31327 1500 aa34.3■■■■□ 3.08
C1orf228-201ENST00000357508 TECPR2O15040 1411 aa34.3■■■■□ 3.08
C1orf228-201ENST00000357508 HDGFL2Q7Z4V5 671 aaPredicted RBP34.28■■■■□ 3.08
C1orf228-201ENST00000357508 TRMT2AQ8IZ69 625 aaKnown RBP34.28■■■■□ 3.08
C1orf228-201ENST00000357508 TBX22Q9Y458 520 aa34.28■■■■□ 3.08
C1orf228-201ENST00000357508 CABP1Q9NZU7 370 aa34.28■■■■□ 3.08
C1orf228-201ENST00000357508 ATP7BP35670 1465 aa34.27■■■■□ 3.08
C1orf228-201ENST00000357508 IQSEC2Q5JU85 1478 aa34.27■■■■□ 3.08
C1orf228-201ENST00000357508 EXOC6Q8TAG9 804 aa34.27■■■■□ 3.08
C1orf228-201ENST00000357508 RBM19Q9Y4C8 960 aaKnown RBP34.27■■■■□ 3.08
C1orf228-201ENST00000357508 FAM135BQ49AJ0 1406 aa34.27■■■■□ 3.08
C1orf228-201ENST00000357508 GGNBP2Q9H3C7 697 aa34.27■■■■□ 3.08
C1orf228-201ENST00000357508 FYB1O15117 783 aa34.26■■■■□ 3.08
C1orf228-201ENST00000357508 RUNDC1Q96C34 613 aa34.23■■■■□ 3.07
C1orf228-201ENST00000357508 SIRT1Q96EB6 747 aa34.23■■■■□ 3.07
C1orf228-201ENST00000357508 PTPRUQ92729 1446 aa34.23■■■■□ 3.07
C1orf228-201ENST00000357508 SPINK5Q9NQ38 1064 aaPredicted RBP34.22■■■■□ 3.07
C1orf228-201ENST00000357508 PLIN1O60240 522 aa34.21■■■■□ 3.07
C1orf228-201ENST00000357508 DIP2AQ14689 1571 aa34.21■■■■□ 3.07
C1orf228-201ENST00000357508 COL3A1P02461 1466 aaPredicted RBP34.19■■■■□ 3.06
C1orf228-201ENST00000357508 NKTRP30414 1462 aaKnown RBP34.19■■■■□ 3.06
C1orf228-201ENST00000357508 WASLO00401 505 aaPredicted RBP34.19■■■■□ 3.06
C1orf228-201ENST00000357508 ROBO2Q9HCK4 1378 aa34.19■■■■□ 3.06
C1orf228-201ENST00000357508 E9PSI1 815 aa34.19■■■■□ 3.06
C1orf228-201ENST00000357508 AMOTL2Q9Y2J4 779 aa34.16■■■■□ 3.06
C1orf228-201ENST00000357508 DMRT2Q9Y5R5 561 aa34.16■■■■□ 3.06
C1orf228-201ENST00000357508 WWC1Q8IX03 1113 aa34.16■■■■□ 3.06
C1orf228-201ENST00000357508 ADGRB2O60241 1585 aa34.15■■■■□ 3.06
C1orf228-201ENST00000357508 TCP11L2Q8N4U5 519 aa34.13■■■■□ 3.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms