RNA–Protein interactions for RNA: ENST00000357348.9

RTFDC1-202, Transcript of Protein RTF2 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTFDC1, Length 2,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-202ENST00000357348 NCKAP5LQ9HCH0 1330 aa17.09■□□□□ 0.33
RTFDC1-202ENST00000357348 WAPLQ7Z5K2 1190 aa17.09■□□□□ 0.33
RTFDC1-202ENST00000357348 POGKQ9P215 609 aa17.09■□□□□ 0.33
RTFDC1-202ENST00000357348 MINK1Q8N4C8 1332 aaPredicted RBP17.06■□□□□ 0.32
RTFDC1-202ENST00000357348 ERICH6Q7L0X2 663 aa17.05■□□□□ 0.32
RTFDC1-202ENST00000357348 PLEKHH1Q9ULM0 1364 aa17.05■□□□□ 0.32
RTFDC1-202ENST00000357348 MRS2Q9HD23 443 aa17.04■□□□□ 0.32
RTFDC1-202ENST00000357348 SMG6Q86US8 1419 aaKnown RBP17.04■□□□□ 0.32
RTFDC1-202ENST00000357348 RNF123Q5XPI4 1314 aa17.03■□□□□ 0.32
RTFDC1-202ENST00000357348 LRPPRCP42704 1394 aaKnown RBP17.03■□□□□ 0.32
RTFDC1-202ENST00000357348 AMOTL2Q9Y2J4 779 aa17.02■□□□□ 0.32
RTFDC1-202ENST00000357348 PTPRUQ92729 1446 aa17.02■□□□□ 0.31
RTFDC1-202ENST00000357348 TBX22Q9Y458 520 aa17.01■□□□□ 0.31
RTFDC1-202ENST00000357348 MED14O60244 1454 aa17.01■□□□□ 0.31
RTFDC1-202ENST00000357348 FAM9BQ8IZU0 186 aa17.01■□□□□ 0.31
RTFDC1-202ENST00000357348 ABCC11Q96J66 1382 aa17■□□□□ 0.31
RTFDC1-202ENST00000357348 B4GALNT3Q6L9W6 998 aa17■□□□□ 0.31
RTFDC1-202ENST00000357348 AEBP2Q6ZN18 517 aaPredicted RBP17■□□□□ 0.31
RTFDC1-202ENST00000357348 CABP2Q9NPB3 220 aa17■□□□□ 0.31
RTFDC1-202ENST00000357348 NPHP4O75161 1426 aaPredicted RBP16.99■□□□□ 0.31
RTFDC1-202ENST00000357348 RBM33Q96EV2 1170 aaKnown RBP16.99■□□□□ 0.31
RTFDC1-202ENST00000357348 ROBO2Q9HCK4 1378 aa16.99■□□□□ 0.31
RTFDC1-202ENST00000357348 LMTK3Q96Q04 1460 aa16.99■□□□□ 0.31
RTFDC1-202ENST00000357348 SRPK2P78362 688 aaKnown RBP16.97■□□□□ 0.31
RTFDC1-202ENST00000357348 TMC1Q8TDI8 760 aa16.97■□□□□ 0.31
RTFDC1-202ENST00000357348 KCNA6P17658 529 aa16.97■□□□□ 0.31
RTFDC1-202ENST00000357348 CDCA8Q53HL2 280 aa16.97■□□□□ 0.31
RTFDC1-202ENST00000357348 TULP4Q9NRJ4 1543 aa16.96■□□□□ 0.31
RTFDC1-202ENST00000357348 PANK3Q9H999 370 aa16.96■□□□□ 0.31
RTFDC1-202ENST00000357348 EVC2Q86UK5 1308 aa16.96■□□□□ 0.31
RTFDC1-202ENST00000357348 SBNO2Q9Y2G9 1366 aa16.96■□□□□ 0.31
RTFDC1-202ENST00000357348 KNDC1Q76NI1 1749 aa16.95■□□□□ 0.3
RTFDC1-202ENST00000357348 DLC1Q96QB1 1528 aa16.95■□□□□ 0.3
RTFDC1-202ENST00000357348 DIP2AQ14689 1571 aa16.95■□□□□ 0.3
RTFDC1-202ENST00000357348 NUTM2FA1L443 756 aa16.94■□□□□ 0.3
RTFDC1-202ENST00000357348 CDK19Q9BWU1 502 aa16.94■□□□□ 0.3
RTFDC1-202ENST00000357348 CPS1P31327 1500 aa16.94■□□□□ 0.3
RTFDC1-202ENST00000357348 NUDCQ9Y266 331 aa16.93■□□□□ 0.3
RTFDC1-202ENST00000357348 MYOM1P52179 1685 aa16.93■□□□□ 0.3
RTFDC1-202ENST00000357348 SLC24A1O60721 1099 aa16.93■□□□□ 0.3
RTFDC1-202ENST00000357348 SLC12A5Q9H2X9 1139 aa16.93■□□□□ 0.3
RTFDC1-202ENST00000357348 TECPR2O15040 1411 aa16.92■□□□□ 0.3
RTFDC1-202ENST00000357348 CHD2O14647 1828 aaKnown RBP16.92■□□□□ 0.3
RTFDC1-202ENST00000357348 NOP58Q9Y2X3 529 aaKnown RBP16.92■□□□□ 0.3
RTFDC1-202ENST00000357348 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.91■□□□□ 0.3
RTFDC1-202ENST00000357348 FAM135BQ49AJ0 1406 aa16.9■□□□□ 0.3
RTFDC1-202ENST00000357348 XRN1Q8IZH2 1706 aaKnown RBP16.9■□□□□ 0.3
RTFDC1-202ENST00000357348 STRCQ7RTU9 1775 aa16.89■□□□□ 0.29
RTFDC1-202ENST00000357348 WASLO00401 505 aaPredicted RBP16.88■□□□□ 0.29
RTFDC1-202ENST00000357348 CC2D1BQ5T0F9 858 aaKnown RBP16.88■□□□□ 0.29
RTFDC1-202ENST00000357348 SIRT1Q96EB6 747 aa16.88■□□□□ 0.29
RTFDC1-202ENST00000357348 PIK3R4Q99570 1358 aa16.87■□□□□ 0.29
RTFDC1-202ENST00000357348 DEKP35659 375 aaKnown RBP16.87■□□□□ 0.29
RTFDC1-202ENST00000357348 PER1O15534 1290 aaPredicted RBP16.86■□□□□ 0.29
RTFDC1-202ENST00000357348 PTCH1Q13635 1447 aa16.85■□□□□ 0.29
RTFDC1-202ENST00000357348 CABP1Q9NZU7 370 aa16.85■□□□□ 0.29
RTFDC1-202ENST00000357348 C14orf37Q86TY3 774 aa16.85■□□□□ 0.29
RTFDC1-202ENST00000357348 CARD14Q9BXL6 1004 aa16.84■□□□□ 0.29
RTFDC1-202ENST00000357348 KNSTRNQ9Y448 316 aa16.84■□□□□ 0.29
RTFDC1-202ENST00000357348 PNISRQ8TF01 805 aaKnown RBP16.83■□□□□ 0.28
RTFDC1-202ENST00000357348 PAK3O75914 559 aaPredicted RBP16.82■□□□□ 0.28
RTFDC1-202ENST00000357348 NUDT16Q96DE0 195 aaKnown RBP16.82■□□□□ 0.28
RTFDC1-202ENST00000357348 STRCP1A6NGW2 1772 aa16.82■□□□□ 0.28
RTFDC1-202ENST00000357348 PROSER2Q86WR7 435 aaPredicted RBP16.82■□□□□ 0.28
RTFDC1-202ENST00000357348 IPO9Q96P70 1041 aaKnown RBP16.81■□□□□ 0.28
RTFDC1-202ENST00000357348 PRR36Q9H6K5 1346 aa16.81■□□□□ 0.28
RTFDC1-202ENST00000357348 ATAD2Q6PL18 1390 aa16.81■□□□□ 0.28
RTFDC1-202ENST00000357348 RGPD8O14715 1765 aaPredicted RBP16.81■□□□□ 0.28
RTFDC1-202ENST00000357348 NALCNQ8IZF0 1738 aa16.8■□□□□ 0.28
RTFDC1-202ENST00000357348 CCDC136Q96JN2 1154 aa16.8■□□□□ 0.28
RTFDC1-202ENST00000357348 KTN1Q86UP2 1357 aaKnown RBP16.79■□□□□ 0.28
RTFDC1-202ENST00000357348 PUS7Q96PZ0 661 aaKnown RBP16.79■□□□□ 0.28
RTFDC1-202ENST00000357348 PPIP5K1Q6PFW1 1433 aa16.79■□□□□ 0.28
RTFDC1-202ENST00000357348 NSD3Q9BZ95 1437 aa16.79■□□□□ 0.28
RTFDC1-202ENST00000357348 A0A1W2PP64 1363 aa16.79■□□□□ 0.28
RTFDC1-202ENST00000357348 ZNF335Q9H4Z2 1342 aaPredicted RBP16.78■□□□□ 0.28
RTFDC1-202ENST00000357348 ADGRB2O60241 1585 aa16.77■□□□□ 0.28
RTFDC1-202ENST00000357348 PMFBP1Q8TBY8 1022 aa16.77■□□□□ 0.28
RTFDC1-202ENST00000357348 CCDC61Q9Y6R9 512 aa16.77■□□□□ 0.28
RTFDC1-202ENST00000357348 ATP7BP35670 1465 aa16.77■□□□□ 0.27
RTFDC1-202ENST00000357348 ANP32AP39687 249 aaKnown RBP16.77■□□□□ 0.27
RTFDC1-202ENST00000357348 AMER1Q5JTC6 1135 aaPredicted RBP16.77■□□□□ 0.27
RTFDC1-202ENST00000357348 ANKRD36BQ8N2N9 1353 aa16.76■□□□□ 0.27
RTFDC1-202ENST00000357348 NWD1Q149M9 1564 aa16.76■□□□□ 0.27
RTFDC1-202ENST00000357348 BRD4O60885 1362 aaPredicted RBP16.76■□□□□ 0.27
RTFDC1-202ENST00000357348 TERF2IPQ9NYB0 399 aa16.76■□□□□ 0.27
RTFDC1-202ENST00000357348 CD163L1Q9NR16 1453 aa16.75■□□□□ 0.27
RTFDC1-202ENST00000357348 HDGFL2Q7Z4V5 671 aaPredicted RBP16.75■□□□□ 0.27
RTFDC1-202ENST00000357348 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.75■□□□□ 0.27
RTFDC1-202ENST00000357348 USP32Q8NFA0 1604 aa16.74■□□□□ 0.27
RTFDC1-202ENST00000357348 TNNT2P45379 298 aaPredicted RBP16.74■□□□□ 0.27
RTFDC1-202ENST00000357348 TMEM94Q12767 1356 aa16.74■□□□□ 0.27
RTFDC1-202ENST00000357348 NINLQ9Y2I6 1382 aa16.72■□□□□ 0.27
RTFDC1-202ENST00000357348 ADGRL3Q9HAR2 1447 aa16.72■□□□□ 0.27
RTFDC1-202ENST00000357348 FMN2Q9NZ56 1722 aa16.71■□□□□ 0.27
RTFDC1-202ENST00000357348 RALBP1Q15311 655 aa16.71■□□□□ 0.27
RTFDC1-202ENST00000357348 GGNBP2Q9H3C7 697 aa16.71■□□□□ 0.27
RTFDC1-202ENST00000357348 ACEP12821 1306 aa16.71■□□□□ 0.27
RTFDC1-202ENST00000357348 NKTRP30414 1462 aaKnown RBP16.71■□□□□ 0.27
RTFDC1-202ENST00000357348 PARD3Q8TEW0 1356 aa16.71■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms