RNA–Protein interactions for RNA: ENST00000357179.9

TOP3B-201, Transcript of DNA topoisomerase III beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3B, Length 2,863 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-201ENST00000357179 PDE3AQ14432 1141 aa18.65■□□□□ 0.58
TOP3B-201ENST00000357179 ISY1Q9ULR0 285 aaKnown RBP18.65■□□□□ 0.58
TOP3B-201ENST00000357179 CGNL1Q0VF96 1302 aa18.65■□□□□ 0.58
TOP3B-201ENST00000357179 TRAK2O60296 914 aa18.64■□□□□ 0.58
TOP3B-201ENST00000357179 GRPEL1Q9HAV7 217 aa18.64■□□□□ 0.58
TOP3B-201ENST00000357179 ERVK-7P63135 1459 aa18.64■□□□□ 0.57
TOP3B-201ENST00000357179 MAP3K4Q9Y6R4 1608 aa18.64■□□□□ 0.57
TOP3B-201ENST00000357179 SPINK5Q9NQ38 1064 aaPredicted RBP18.64■□□□□ 0.57
TOP3B-201ENST00000357179 ERCC6L2Q5T890 1561 aa18.63■□□□□ 0.57
TOP3B-201ENST00000357179 CCDC146Q8IYE0 955 aa18.63■□□□□ 0.57
TOP3B-201ENST00000357179 POLR3AO14802 1390 aaPredicted RBP18.62■□□□□ 0.57
TOP3B-201ENST00000357179 KANK1Q14678 1352 aa18.62■□□□□ 0.57
TOP3B-201ENST00000357179 UPF2Q9HAU5 1272 aaKnown RBP18.62■□□□□ 0.57
TOP3B-201ENST00000357179 MYO3AQ8NEV4 1616 aa18.62■□□□□ 0.57
TOP3B-201ENST00000357179 SBNO2Q9Y2G9 1366 aa18.62■□□□□ 0.57
TOP3B-201ENST00000357179 CALD1Q05682 793 aaKnown RBP18.61■□□□□ 0.57
TOP3B-201ENST00000357179 ZMYM3Q14202 1370 aa18.61■□□□□ 0.57
TOP3B-201ENST00000357179 BCAR3O75815 825 aa18.6■□□□□ 0.57
TOP3B-201ENST00000357179 ABCA6Q8N139 1617 aa18.6■□□□□ 0.57
TOP3B-201ENST00000357179 AAMPQ13685 434 aa18.6■□□□□ 0.57
TOP3B-201ENST00000357179 CHMP5Q9NZZ3 219 aa18.59■□□□□ 0.57
TOP3B-201ENST00000357179 INO80Q9ULG1 1556 aaPredicted RBP18.59■□□□□ 0.57
TOP3B-201ENST00000357179 IFT172Q9UG01 1749 aa18.58■□□□□ 0.56
TOP3B-201ENST00000357179 ATP7AQ04656 1500 aa18.57■□□□□ 0.56
TOP3B-201ENST00000357179 TRIM44Q96DX7 344 aaPredicted RBP18.57■□□□□ 0.56
TOP3B-201ENST00000357179 NRXN1Q9ULB1 1477 aa18.57■□□□□ 0.56
TOP3B-201ENST00000357179 CLUAP1Q96AJ1 413 aa18.56■□□□□ 0.56
TOP3B-201ENST00000357179 CARD14Q9BXL6 1004 aa18.56■□□□□ 0.56
TOP3B-201ENST00000357179 PRDM4Q9UKN5 801 aa18.56■□□□□ 0.56
TOP3B-201ENST00000357179 DDX11L8A8MPP1 907 aa18.55■□□□□ 0.56
TOP3B-201ENST00000357179 WWC1Q8IX03 1113 aa18.55■□□□□ 0.56
TOP3B-201ENST00000357179 AFAP1Q8N556 730 aa18.55■□□□□ 0.56
TOP3B-201ENST00000357179 KIF1BO60333 1816 aa18.54■□□□□ 0.56
TOP3B-201ENST00000357179 PLEKHG5O94827 1062 aa18.54■□□□□ 0.56
TOP3B-201ENST00000357179 CFAP70Q5T0N1 1121 aa18.54■□□□□ 0.56
TOP3B-201ENST00000357179 DMRT2Q9Y5R5 561 aa18.54■□□□□ 0.56
TOP3B-201ENST00000357179 SETBP1Q9Y6X0 1596 aa18.54■□□□□ 0.56
TOP3B-201ENST00000357179 MROH1Q8NDA8 1641 aa18.53■□□□□ 0.56
TOP3B-201ENST00000357179 SHPRHQ149N8 1683 aa18.53■□□□□ 0.56
TOP3B-201ENST00000357179 SPRYD3Q8NCJ5 442 aa18.53■□□□□ 0.56
TOP3B-201ENST00000357179 KIAA1211Q6ZU35 1233 aa18.52■□□□□ 0.56
TOP3B-201ENST00000357179 ABCA9Q8IUA7 1624 aa18.52■□□□□ 0.56
TOP3B-201ENST00000357179 IQSEC2Q5JU85 1478 aa18.51■□□□□ 0.55
TOP3B-201ENST00000357179 EFCAB6Q5THR3 1501 aa18.51■□□□□ 0.55
TOP3B-201ENST00000357179 ADGRF5Q8IZF2 1346 aa18.51■□□□□ 0.55
TOP3B-201ENST00000357179 NCBP3Q53F19 620 aaKnown RBP18.51■□□□□ 0.55
TOP3B-201ENST00000357179 PHF23Q9BUL5 403 aaPredicted RBP18.51■□□□□ 0.55
TOP3B-201ENST00000357179 PMFBP1Q8TBY8 1022 aa18.5■□□□□ 0.55
TOP3B-201ENST00000357179 USP32Q8NFA0 1604 aa18.5■□□□□ 0.55
TOP3B-201ENST00000357179 CANXP27824 592 aaKnown RBP18.49■□□□□ 0.55
TOP3B-201ENST00000357179 RUNDC1Q96C34 613 aa18.49■□□□□ 0.55
TOP3B-201ENST00000357179 ZNF692Q9BU19 519 aaPredicted RBP18.49■□□□□ 0.55
TOP3B-201ENST00000357179 WDR63Q8IWG1 891 aa18.48■□□□□ 0.55
TOP3B-201ENST00000357179 LMTK2Q8IWU2 1503 aa18.48■□□□□ 0.55
TOP3B-201ENST00000357179 TERF1P54274 439 aa18.48■□□□□ 0.55
TOP3B-201ENST00000357179 COG6Q9Y2V7 657 aa18.48■□□□□ 0.55
TOP3B-201ENST00000357179 GAS2L3Q86XJ1 694 aa18.48■□□□□ 0.55
TOP3B-201ENST00000357179 UGGT1Q9NYU2 1555 aa18.47■□□□□ 0.55
TOP3B-201ENST00000357179 KIF3BO15066 747 aa18.47■□□□□ 0.55
TOP3B-201ENST00000357179 RARSP54136 660 aaKnown RBP18.47■□□□□ 0.55
TOP3B-201ENST00000357179 PANK1Q8TE04 598 aa18.47■□□□□ 0.55
TOP3B-201ENST00000357179 FANCAO15360 1455 aa18.47■□□□□ 0.55
TOP3B-201ENST00000357179 MROH2AA6NES4 1674 aa18.47■□□□□ 0.55
TOP3B-201ENST00000357179 CCDC27Q2M243 656 aa18.47■□□□□ 0.55
TOP3B-201ENST00000357179 ZC3H13Q5T200 1668 aaKnown RBP18.47■□□□□ 0.55
TOP3B-201ENST00000357179 OFD1O75665 1012 aa18.46■□□□□ 0.55
TOP3B-201ENST00000357179 NSD3Q9BZ95 1437 aa18.46■□□□□ 0.55
TOP3B-201ENST00000357179 ADGRB3O60242 1522 aa18.46■□□□□ 0.55
TOP3B-201ENST00000357179 NCOA3Q9Y6Q9 1424 aa18.45■□□□□ 0.54
TOP3B-201ENST00000357179 RIPK4P57078 832 aa18.45■□□□□ 0.54
TOP3B-201ENST00000357179 DDIT3P35638 169 aa18.44■□□□□ 0.54
TOP3B-201ENST00000357179 MORC1Q86VD1 984 aa18.44■□□□□ 0.54
TOP3B-201ENST00000357179 MAP7D2Q96T17 732 aa18.44■□□□□ 0.54
TOP3B-201ENST00000357179 PDZRN3Q9UPQ7 1066 aa18.44■□□□□ 0.54
TOP3B-201ENST00000357179 PPP1R9BQ96SB3 815 aa18.44■□□□□ 0.54
TOP3B-201ENST00000357179 C22orf23Q9BZE7 217 aa18.44■□□□□ 0.54
TOP3B-201ENST00000357179 ZSCAN30Q86W11 494 aa18.44■□□□□ 0.54
TOP3B-201ENST00000357179 PPRC1Q5VV67 1664 aaKnown RBP18.43■□□□□ 0.54
TOP3B-201ENST00000357179 CCDC173Q0VFZ6 552 aa18.43■□□□□ 0.54
TOP3B-201ENST00000357179 ZNF518AQ6AHZ1 1483 aa18.43■□□□□ 0.54
TOP3B-201ENST00000357179 RBM10P98175 930 aaKnown RBP18.42■□□□□ 0.54
TOP3B-201ENST00000357179 TCP11L2Q8N4U5 519 aa18.42■□□□□ 0.54
TOP3B-201ENST00000357179 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.42■□□□□ 0.54
TOP3B-201ENST00000357179 ADGRL1O94910 1474 aa18.42■□□□□ 0.54
TOP3B-201ENST00000357179 QRICH2Q9H0J4 1663 aa18.41■□□□□ 0.54
TOP3B-201ENST00000357179 PCDHB15Q9Y5E8 787 aa18.41■□□□□ 0.54
TOP3B-201ENST00000357179 PUS7Q96PZ0 661 aaKnown RBP18.41■□□□□ 0.54
TOP3B-201ENST00000357179 SKOR2Q2VWA4 1001 aaPredicted RBP18.4■□□□□ 0.54
TOP3B-201ENST00000357179 NOS1P29475 1434 aa18.4■□□□□ 0.54
TOP3B-201ENST00000357179 HSCBQ8IWL3 235 aa18.4■□□□□ 0.54
TOP3B-201ENST00000357179 ADGRB1O14514 1584 aa18.4■□□□□ 0.54
TOP3B-201ENST00000357179 RWDD1Q9H446 243 aaPredicted RBP18.4■□□□□ 0.54
TOP3B-201ENST00000357179 CFAP53Q96M91 514 aa18.39■□□□□ 0.53
TOP3B-201ENST00000357179 PPLO60437 1756 aa18.39■□□□□ 0.53
TOP3B-201ENST00000357179 C14orf93Q9H972 538 aaKnown RBP18.39■□□□□ 0.53
TOP3B-201ENST00000357179 NSD2O96028 1365 aa18.39■□□□□ 0.53
TOP3B-201ENST00000357179 TNPO1Q92973 898 aaKnown RBP18.38■□□□□ 0.53
TOP3B-201ENST00000357179 CT47B1P0C2W7 299 aaPredicted RBP18.38■□□□□ 0.53
TOP3B-201ENST00000357179 PTMSP20962 102 aa18.37■□□□□ 0.53
TOP3B-201ENST00000357179 ADGRB2O60241 1585 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms