RNA–Protein interactions for RNA: ENST00000357164.3

GM2A-201, Transcript of GM2 ganglioside activator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GM2A, Length 3,896 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GM2A-201ENST00000357164 KNDC1Q76NI1 1749 aa10.9□□□□□ -0.66
GM2A-201ENST00000357164 ADGRL1O94910 1474 aa10.9□□□□□ -0.66
GM2A-201ENST00000357164 BECN1Q14457 450 aa10.9□□□□□ -0.66
GM2A-201ENST00000357164 SMAP1Q8IYB5 467 aaPredicted RBP10.9□□□□□ -0.66
GM2A-201ENST00000357164 ERVK-7P63135 1459 aa10.9□□□□□ -0.67
GM2A-201ENST00000357164 RAB3GAP1Q15042 981 aa10.89□□□□□ -0.67
GM2A-201ENST00000357164 HS1BP3Q53T59 392 aa10.89□□□□□ -0.67
GM2A-201ENST00000357164 PLB1Q6P1J6 1458 aa10.89□□□□□ -0.67
GM2A-201ENST00000357164 NRXN1Q9ULB1 1477 aa10.89□□□□□ -0.67
GM2A-201ENST00000357164 NCBP3Q53F19 620 aaKnown RBP10.89□□□□□ -0.67
GM2A-201ENST00000357164 UTP14CQ5TAP6 766 aaKnown RBP10.89□□□□□ -0.67
GM2A-201ENST00000357164 CHMP5Q9NZZ3 219 aa10.89□□□□□ -0.67
GM2A-201ENST00000357164 SLKQ9H2G2 1235 aaPredicted RBP10.89□□□□□ -0.67
GM2A-201ENST00000357164 NUP155O75694 1391 aa10.89□□□□□ -0.67
GM2A-201ENST00000357164 RBM10P98175 930 aaKnown RBP10.88□□□□□ -0.67
GM2A-201ENST00000357164 MAP3K4Q9Y6R4 1608 aa10.88□□□□□ -0.67
GM2A-201ENST00000357164 RGS3P49796 1198 aa10.88□□□□□ -0.67
GM2A-201ENST00000357164 MED14O60244 1454 aa10.88□□□□□ -0.67
GM2A-201ENST00000357164 POLR3AO14802 1390 aaPredicted RBP10.88□□□□□ -0.67
GM2A-201ENST00000357164 MROH2AA6NES4 1674 aa10.87□□□□□ -0.67
GM2A-201ENST00000357164 UHRF1BP1LA0JNW5 1464 aa10.87□□□□□ -0.67
GM2A-201ENST00000357164 RLBP1P12271 317 aa10.87□□□□□ -0.67
GM2A-201ENST00000357164 NGEFQ8N5V2 710 aa10.87□□□□□ -0.67
GM2A-201ENST00000357164 MAGI1Q96QZ7 1491 aaPredicted RBP10.87□□□□□ -0.67
GM2A-201ENST00000357164 KIAA1211Q6ZU35 1233 aa10.86□□□□□ -0.67
GM2A-201ENST00000357164 PTPRTO14522 1441 aa10.86□□□□□ -0.67
GM2A-201ENST00000357164 ZSCAN20P17040 1043 aaPredicted RBP10.86□□□□□ -0.67
GM2A-201ENST00000357164 FGD1P98174 961 aa10.86□□□□□ -0.67
GM2A-201ENST00000357164 SCAF11Q99590 1463 aaKnown RBP10.86□□□□□ -0.67
GM2A-201ENST00000357164 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.85□□□□□ -0.67
GM2A-201ENST00000357164 E9PSI1 815 aa10.85□□□□□ -0.67
GM2A-201ENST00000357164 ADGRB1O14514 1584 aa10.85□□□□□ -0.67
GM2A-201ENST00000357164 CYP2E1P05181 493 aaPredicted RBP10.85□□□□□ -0.67
GM2A-201ENST00000357164 SETBP1Q9Y6X0 1596 aa10.85□□□□□ -0.67
GM2A-201ENST00000357164 DDX11L8A8MPP1 907 aa10.85□□□□□ -0.67
GM2A-201ENST00000357164 MYH16Q9H6N6 1097 aa10.85□□□□□ -0.67
GM2A-201ENST00000357164 IFT140Q96RY7 1462 aa10.85□□□□□ -0.67
GM2A-201ENST00000357164 NOS1P29475 1434 aa10.85□□□□□ -0.67
GM2A-201ENST00000357164 NOL7Q9UMY1 257 aaKnown RBP10.84□□□□□ -0.67
GM2A-201ENST00000357164 ATP10BO94823 1461 aa10.84□□□□□ -0.67
GM2A-201ENST00000357164 TET3O43151 1660 aa10.84□□□□□ -0.67
GM2A-201ENST00000357164 ZNF445P59923 1031 aa10.84□□□□□ -0.67
GM2A-201ENST00000357164 CCDC173Q0VFZ6 552 aa10.84□□□□□ -0.67
GM2A-201ENST00000357164 ZSCAN30Q86W11 494 aa10.84□□□□□ -0.67
GM2A-201ENST00000357164 TNPO1Q92973 898 aaKnown RBP10.84□□□□□ -0.67
GM2A-201ENST00000357164 CIZ1Q9ULV3 898 aaPredicted RBP10.84□□□□□ -0.67
GM2A-201ENST00000357164 ZNF518AQ6AHZ1 1483 aa10.84□□□□□ -0.67
GM2A-201ENST00000357164 DMTNQ08495 405 aa10.84□□□□□ -0.67
GM2A-201ENST00000357164 CC2D1BQ5T0F9 858 aaKnown RBP10.84□□□□□ -0.67
GM2A-201ENST00000357164 MROH1Q8NDA8 1641 aa10.84□□□□□ -0.67
GM2A-201ENST00000357164 HSP90AB1P08238 724 aaKnown RBP10.84□□□□□ -0.67
GM2A-201ENST00000357164 PDZRN3Q9UPQ7 1066 aa10.84□□□□□ -0.67
GM2A-201ENST00000357164 COL3A1P02461 1466 aaPredicted RBP10.83□□□□□ -0.68
GM2A-201ENST00000357164 QRICH2Q9H0J4 1663 aa10.83□□□□□ -0.68
GM2A-201ENST00000357164 RARSP54136 660 aaKnown RBP10.83□□□□□ -0.68
GM2A-201ENST00000357164 MYOM2P54296 1465 aa10.82□□□□□ -0.68
GM2A-201ENST00000357164 CDC42BPGQ6DT37 1551 aa10.82□□□□□ -0.68
GM2A-201ENST00000357164 MAP7D2Q96T17 732 aa10.82□□□□□ -0.68
GM2A-201ENST00000357164 GTF2F1P35269 517 aaKnown RBP eCLIP10.81□□□□□ -0.68
GM2A-201ENST00000357164 HDAC1Q13547 482 aaPredicted RBP10.81□□□□□ -0.68
GM2A-201ENST00000357164 TNNQ9UQP3 1299 aa10.81□□□□□ -0.68
GM2A-201ENST00000357164 SYCP2Q9BX26 1530 aa10.81□□□□□ -0.68
GM2A-201ENST00000357164 PPLO60437 1756 aa10.81□□□□□ -0.68
GM2A-201ENST00000357164 WWC1Q8IX03 1113 aa10.81□□□□□ -0.68
GM2A-201ENST00000357164 CCDC27Q2M243 656 aa10.81□□□□□ -0.68
GM2A-201ENST00000357164 PANK1Q8TE04 598 aa10.81□□□□□ -0.68
GM2A-201ENST00000357164 PDS5BQ9NTI5 1447 aa10.8□□□□□ -0.68
GM2A-201ENST00000357164 CD2BP2O95400 341 aaKnown RBP10.8□□□□□ -0.68
GM2A-201ENST00000357164 PMFBP1Q8TBY8 1022 aa10.8□□□□□ -0.68
GM2A-201ENST00000357164 C22orf23Q9BZE7 217 aa10.8□□□□□ -0.68
GM2A-201ENST00000357164 SBNO2Q9Y2G9 1366 aa10.79□□□□□ -0.68
GM2A-201ENST00000357164 ZNF710Q8N1W2 664 aa10.79□□□□□ -0.68
GM2A-201ENST00000357164 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.78□□□□□ -0.68
GM2A-201ENST00000357164 DYNC1I1O14576 645 aa10.78□□□□□ -0.68
GM2A-201ENST00000357164 KLHL40Q2TBA0 621 aa10.78□□□□□ -0.68
GM2A-201ENST00000357164 GZF1Q9H116 711 aaPredicted RBP10.78□□□□□ -0.68
GM2A-201ENST00000357164 SKOR2Q2VWA4 1001 aaPredicted RBP10.77□□□□□ -0.68
GM2A-201ENST00000357164 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.77□□□□□ -0.68
GM2A-201ENST00000357164 ARHGEF28Q8N1W1 1705 aaKnown RBP10.77□□□□□ -0.69
GM2A-201ENST00000357164 ERCC6Q03468 1493 aa10.77□□□□□ -0.69
GM2A-201ENST00000357164 KIF1BO60333 1816 aa10.77□□□□□ -0.69
GM2A-201ENST00000357164 CFDP1Q9UEE9 299 aaPredicted RBP10.77□□□□□ -0.69
GM2A-201ENST00000357164 COG6Q9Y2V7 657 aa10.77□□□□□ -0.69
GM2A-201ENST00000357164 N4BP2Q86UW6 1770 aaPredicted RBP10.77□□□□□ -0.69
GM2A-201ENST00000357164 TMF1P82094 1093 aa10.76□□□□□ -0.69
GM2A-201ENST00000357164 PREX1Q8TCU6 1659 aa10.76□□□□□ -0.69
GM2A-201ENST00000357164 APAF1O14727 1248 aa10.76□□□□□ -0.69
GM2A-201ENST00000357164 CARD14Q9BXL6 1004 aa10.76□□□□□ -0.69
GM2A-201ENST00000357164 PIK3R4Q99570 1358 aa10.76□□□□□ -0.69
GM2A-201ENST00000357164 CD109Q6YHK3 1445 aa10.76□□□□□ -0.69
GM2A-201ENST00000357164 CLTCQ00610 1675 aaKnown RBP10.75□□□□□ -0.69
GM2A-201ENST00000357164 MCM5P33992 734 aa10.75□□□□□ -0.69
GM2A-201ENST00000357164 MTERF4Q7Z6M4 381 aaKnown RBP10.74□□□□□ -0.69
GM2A-201ENST00000357164 GLI2P10070 1586 aa10.74□□□□□ -0.69
GM2A-201ENST00000357164 MVPQ14764 893 aaKnown RBP10.74□□□□□ -0.69
GM2A-201ENST00000357164 CCDC94Q9BW85 323 aaPredicted RBP10.74□□□□□ -0.69
GM2A-201ENST00000357164 PTMSP20962 102 aa10.74□□□□□ -0.69
GM2A-201ENST00000357164 GTF2E1P29083 439 aaPredicted RBP10.74□□□□□ -0.69
GM2A-201ENST00000357164 PPIP5K1Q6PFW1 1433 aa10.73□□□□□ -0.69
GM2A-201ENST00000357164 WDR63Q8IWG1 891 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms