RNA–Protein interactions for RNA: ENST00000356729.5

ATP2B4-202, Transcript of ATPase plasma membrane Ca2+ transporting 4, humanhuman

TSL 5

Gene ATP2B4, Length 613 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B4-202ENST00000356729 PRAM1Q96QH2 718 aa13.2□□□□□ -0.3
ATP2B4-202ENST00000356729 TRAK1Q9UPV9 953 aa13.2□□□□□ -0.3
ATP2B4-202ENST00000356729 ADGRB2O60241 1585 aa13.2□□□□□ -0.3
ATP2B4-202ENST00000356729 SBNO2Q9Y2G9 1366 aa13.2□□□□□ -0.3
ATP2B4-202ENST00000356729 CADPS2Q86UW7 1296 aa13.19□□□□□ -0.3
ATP2B4-202ENST00000356729 CDC42BPGQ6DT37 1551 aa13.19□□□□□ -0.3
ATP2B4-202ENST00000356729 ARHGEF28Q8N1W1 1705 aaKnown RBP13.19□□□□□ -0.3
ATP2B4-202ENST00000356729 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.19□□□□□ -0.3
ATP2B4-202ENST00000356729 TOM1O60784 492 aa13.18□□□□□ -0.3
ATP2B4-202ENST00000356729 RBM33Q96EV2 1170 aaKnown RBP13.18□□□□□ -0.3
ATP2B4-202ENST00000356729 CARD11Q9BXL7 1154 aa13.18□□□□□ -0.3
ATP2B4-202ENST00000356729 NALCNQ8IZF0 1738 aa13.17□□□□□ -0.3
ATP2B4-202ENST00000356729 FBXO41Q8TF61 875 aa13.17□□□□□ -0.3
ATP2B4-202ENST00000356729 EIF3AQ14152 1382 aaKnown RBP13.17□□□□□ -0.3
ATP2B4-202ENST00000356729 CENPJQ9HC77 1338 aaPredicted RBP13.16□□□□□ -0.3
ATP2B4-202ENST00000356729 MST1RQ04912 1400 aa13.16□□□□□ -0.3
ATP2B4-202ENST00000356729 POGKQ9P215 609 aa13.16□□□□□ -0.3
ATP2B4-202ENST00000356729 SLAIN2Q9P270 581 aa13.16□□□□□ -0.3
ATP2B4-202ENST00000356729 ATF3P18847 181 aa13.15□□□□□ -0.3
ATP2B4-202ENST00000356729 UBAP1LF5GYI3 381 aa13.14□□□□□ -0.31
ATP2B4-202ENST00000356729 SLC24A1O60721 1099 aa13.14□□□□□ -0.31
ATP2B4-202ENST00000356729 ANKARQ7Z5J8 1434 aa13.13□□□□□ -0.31
ATP2B4-202ENST00000356729 C1orf167Q5SNV9 1468 aa13.13□□□□□ -0.31
ATP2B4-202ENST00000356729 WASLO00401 505 aaPredicted RBP13.13□□□□□ -0.31
ATP2B4-202ENST00000356729 C14orf37Q86TY3 774 aa13.13□□□□□ -0.31
ATP2B4-202ENST00000356729 TESK2Q96S53 571 aa13.13□□□□□ -0.31
ATP2B4-202ENST00000356729 PUS7Q96PZ0 661 aaKnown RBP13.12□□□□□ -0.31
ATP2B4-202ENST00000356729 USP47Q96K76 1375 aa13.11□□□□□ -0.31
ATP2B4-202ENST00000356729 FMN2Q9NZ56 1722 aa13.1□□□□□ -0.31
ATP2B4-202ENST00000356729 MINK1Q8N4C8 1332 aaPredicted RBP13.1□□□□□ -0.31
ATP2B4-202ENST00000356729 TULP4Q9NRJ4 1543 aa13.09□□□□□ -0.31
ATP2B4-202ENST00000356729 ST20-MTHFSA0A0A6YYL1 179 aa13.09□□□□□ -0.31
ATP2B4-202ENST00000356729 DCAF8L1A6NGE4 600 aa13.09□□□□□ -0.31
ATP2B4-202ENST00000356729 SAFB2Q14151 953 aaKnown RBP eCLIP13.09□□□□□ -0.31
ATP2B4-202ENST00000356729 BRINP3Q76B58 766 aa13.09□□□□□ -0.31
ATP2B4-202ENST00000356729 QRICH2Q9H0J4 1663 aa13.08□□□□□ -0.32
ATP2B4-202ENST00000356729 HIRIP3Q9BW71 556 aaPredicted RBP13.07□□□□□ -0.32
ATP2B4-202ENST00000356729 CDK19Q9BWU1 502 aa13.07□□□□□ -0.32
ATP2B4-202ENST00000356729 ATP7BP35670 1465 aa13.07□□□□□ -0.32
ATP2B4-202ENST00000356729 EVC2Q86UK5 1308 aa13.07□□□□□ -0.32
ATP2B4-202ENST00000356729 PRR36Q9H6K5 1346 aa13.07□□□□□ -0.32
ATP2B4-202ENST00000356729 AHDC1Q5TGY3 1603 aaPredicted RBP13.06□□□□□ -0.32
ATP2B4-202ENST00000356729 USP32Q8NFA0 1604 aa13.06□□□□□ -0.32
ATP2B4-202ENST00000356729 ZEB1P37275 1124 aaPredicted RBP13.06□□□□□ -0.32
ATP2B4-202ENST00000356729 ROBO1Q9Y6N7 1651 aa13.05□□□□□ -0.32
ATP2B4-202ENST00000356729 PLEKHG3A1L390 1219 aa13.05□□□□□ -0.32
ATP2B4-202ENST00000356729 EIF4G2P78344 907 aaKnown RBP eCLIP13.05□□□□□ -0.32
ATP2B4-202ENST00000356729 CCDC61Q9Y6R9 512 aa13.05□□□□□ -0.32
ATP2B4-202ENST00000356729 NUDT16Q96DE0 195 aaKnown RBP13.04□□□□□ -0.32
ATP2B4-202ENST00000356729 ORAI2Q96SN7 254 aa13.04□□□□□ -0.32
ATP2B4-202ENST00000356729 SOS2Q07890 1332 aaPredicted RBP13.03□□□□□ -0.32
ATP2B4-202ENST00000356729 POLR3AO14802 1390 aaPredicted RBP13.03□□□□□ -0.32
ATP2B4-202ENST00000356729 ATAD2Q6PL18 1390 aa13.03□□□□□ -0.32
ATP2B4-202ENST00000356729 NHSL1Q5SYE7 1610 aa13.02□□□□□ -0.32
ATP2B4-202ENST00000356729 HSPA5P11021 654 aaKnown RBP13.02□□□□□ -0.33
ATP2B4-202ENST00000356729 PIP4K2BP78356 416 aa13.02□□□□□ -0.33
ATP2B4-202ENST00000356729 ESCO1Q5FWF5 840 aa13.02□□□□□ -0.33
ATP2B4-202ENST00000356729 PHF8Q9UPP1 1060 aa13.02□□□□□ -0.33
ATP2B4-202ENST00000356729 KIF1AQ12756 1690 aa13.02□□□□□ -0.33
ATP2B4-202ENST00000356729 TOPAZ1Q8N9V7 1692 aa13.02□□□□□ -0.33
ATP2B4-202ENST00000356729 ILDR1Q86SU0 546 aaPredicted RBP13.01□□□□□ -0.33
ATP2B4-202ENST00000356729 NPHP3Q7Z494 1330 aa13.01□□□□□ -0.33
ATP2B4-202ENST00000356729 PXDNQ92626 1479 aa13□□□□□ -0.33
ATP2B4-202ENST00000356729 BRD4O60885 1362 aaPredicted RBP13□□□□□ -0.33
ATP2B4-202ENST00000356729 DISP3Q9P2K9 1392 aa13□□□□□ -0.33
ATP2B4-202ENST00000356729 NINLQ9Y2I6 1382 aa13□□□□□ -0.33
ATP2B4-202ENST00000356729 TMF1P82094 1093 aa13□□□□□ -0.33
ATP2B4-202ENST00000356729 CDCA8Q53HL2 280 aa13□□□□□ -0.33
ATP2B4-202ENST00000356729 CABP2Q9NPB3 220 aa13□□□□□ -0.33
ATP2B4-202ENST00000356729 HSPA1LP34931 641 aa12.99□□□□□ -0.33
ATP2B4-202ENST00000356729 SRPK2P78362 688 aaKnown RBP12.99□□□□□ -0.33
ATP2B4-202ENST00000356729 COL16A1Q07092 1604 aaPredicted RBP12.99□□□□□ -0.33
ATP2B4-202ENST00000356729 CPSF1Q10570 1443 aaKnown RBP12.98□□□□□ -0.33
ATP2B4-202ENST00000356729 NUTM2FA1L443 756 aa12.98□□□□□ -0.33
ATP2B4-202ENST00000356729 RNF39Q9H2S5 420 aa12.98□□□□□ -0.33
ATP2B4-202ENST00000356729 ITSN1Q15811 1721 aa12.98□□□□□ -0.33
ATP2B4-202ENST00000356729 PPIP5K1Q6PFW1 1433 aa12.97□□□□□ -0.33
ATP2B4-202ENST00000356729 SSH2Q76I76 1423 aa12.97□□□□□ -0.33
ATP2B4-202ENST00000356729 SBNO1A3KN83 1393 aa12.97□□□□□ -0.33
ATP2B4-202ENST00000356729 FOXO3O43524 673 aa12.97□□□□□ -0.33
ATP2B4-202ENST00000356729 RGPD8O14715 1765 aaPredicted RBP12.97□□□□□ -0.33
ATP2B4-202ENST00000356729 LRRC59Q96AG4 307 aaKnown RBP12.96□□□□□ -0.33
ATP2B4-202ENST00000356729 ZNF692Q9BU19 519 aaPredicted RBP12.96□□□□□ -0.33
ATP2B4-202ENST00000356729 CABP1Q9NZU7 370 aa12.96□□□□□ -0.33
ATP2B4-202ENST00000356729 CD163L1Q9NR16 1453 aa12.96□□□□□ -0.34
ATP2B4-202ENST00000356729 ACEP12821 1306 aa12.95□□□□□ -0.34
ATP2B4-202ENST00000356729 SPATA31A3Q5VYP0 1347 aa12.94□□□□□ -0.34
ATP2B4-202ENST00000356729 PSME1Q06323 249 aa12.94□□□□□ -0.34
ATP2B4-202ENST00000356729 KRT28Q7Z3Y7 464 aa12.94□□□□□ -0.34
ATP2B4-202ENST00000356729 PMFBP1Q8TBY8 1022 aa12.94□□□□□ -0.34
ATP2B4-202ENST00000356729 DDX17Q92841 729 aaKnown RBP12.94□□□□□ -0.34
ATP2B4-202ENST00000356729 JCADQ9P266 1359 aa12.94□□□□□ -0.34
ATP2B4-202ENST00000356729 PHLPP1O60346 1717 aa12.93□□□□□ -0.34
ATP2B4-202ENST00000356729 C11orf95C9JLR9 678 aaPredicted RBP12.93□□□□□ -0.34
ATP2B4-202ENST00000356729 USP6P35125 1406 aa12.93□□□□□ -0.34
ATP2B4-202ENST00000356729 NGDNQ8NEJ9 315 aaKnown RBP12.92□□□□□ -0.34
ATP2B4-202ENST00000356729 SLC12A5Q9H2X9 1139 aa12.92□□□□□ -0.34
ATP2B4-202ENST00000356729 TRPM3Q9HCF6 1732 aaPredicted RBP12.92□□□□□ -0.34
ATP2B4-202ENST00000356729 PNPLA6Q8IY17 1366 aa12.92□□□□□ -0.34
ATP2B4-202ENST00000356729 TNS3Q68CZ2 1445 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 122.5 ms