RNA–Protein interactions for RNA: ENST00000356537.8

CCDC25-201, Transcript of coiled-coil domain containing 25, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC25, Length 3,626 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC25-201ENST00000356537 PPP4R2Q9NY27 417 aa12.68□□□□□ -0.38
CCDC25-201ENST00000356537 STK26Q9P289 416 aa12.68□□□□□ -0.38
CCDC25-201ENST00000356537 PPP6R1Q9UPN7 881 aa12.67□□□□□ -0.38
CCDC25-201ENST00000356537 ANKRD26Q9UPS8 1709 aa12.67□□□□□ -0.38
CCDC25-201ENST00000356537 ZMYM3Q14202 1370 aa12.67□□□□□ -0.38
CCDC25-201ENST00000356537 NLRP1Q9C000 1473 aa12.66□□□□□ -0.38
CCDC25-201ENST00000356537 SLC24A1O60721 1099 aa12.66□□□□□ -0.38
CCDC25-201ENST00000356537 RIMS2Q9UQ26 1411 aa12.65□□□□□ -0.38
CCDC25-201ENST00000356537 A0A1W2PP64 1363 aa12.65□□□□□ -0.38
CCDC25-201ENST00000356537 ANKRD36BQ8N2N9 1353 aa12.65□□□□□ -0.38
CCDC25-201ENST00000356537 PRAM1Q96QH2 718 aa12.65□□□□□ -0.38
CCDC25-201ENST00000356537 CCDC146Q8IYE0 955 aa12.64□□□□□ -0.39
CCDC25-201ENST00000356537 SPINK5Q9NQ38 1064 aaPredicted RBP12.64□□□□□ -0.39
CCDC25-201ENST00000356537 EVC2Q86UK5 1308 aa12.64□□□□□ -0.39
CCDC25-201ENST00000356537 DMRT2Q9Y5R5 561 aa12.63□□□□□ -0.39
CCDC25-201ENST00000356537 POLR3AO14802 1390 aaPredicted RBP12.63□□□□□ -0.39
CCDC25-201ENST00000356537 PDE3BQ13370 1112 aa12.63□□□□□ -0.39
CCDC25-201ENST00000356537 PUS7Q96PZ0 661 aaKnown RBP12.63□□□□□ -0.39
CCDC25-201ENST00000356537 DLC1Q96QB1 1528 aa12.63□□□□□ -0.39
CCDC25-201ENST00000356537 RRP1P56182 461 aaKnown RBP12.63□□□□□ -0.39
CCDC25-201ENST00000356537 KIF20BQ96Q89 1820 aa12.63□□□□□ -0.39
CCDC25-201ENST00000356537 METP08581 1390 aa12.63□□□□□ -0.39
CCDC25-201ENST00000356537 KNDC1Q76NI1 1749 aa12.62□□□□□ -0.39
CCDC25-201ENST00000356537 RCAN3Q9UKA8 241 aa12.62□□□□□ -0.39
CCDC25-201ENST00000356537 MINK1Q8N4C8 1332 aaPredicted RBP12.62□□□□□ -0.39
CCDC25-201ENST00000356537 C3P01024 1663 aa12.62□□□□□ -0.39
CCDC25-201ENST00000356537 TNNT2P45379 298 aaPredicted RBP12.62□□□□□ -0.39
CCDC25-201ENST00000356537 IQSEC2Q5JU85 1478 aa12.61□□□□□ -0.39
CCDC25-201ENST00000356537 DUSP27Q5VZP5 1158 aa12.61□□□□□ -0.39
CCDC25-201ENST00000356537 ABCC11Q96J66 1382 aa12.61□□□□□ -0.39
CCDC25-201ENST00000356537 WAPLQ7Z5K2 1190 aa12.61□□□□□ -0.39
CCDC25-201ENST00000356537 WDR43Q15061 677 aaKnown RBP eCLIP12.6□□□□□ -0.39
CCDC25-201ENST00000356537 COL3A1P02461 1466 aaPredicted RBP12.59□□□□□ -0.39
CCDC25-201ENST00000356537 PLIN1O60240 522 aa12.59□□□□□ -0.39
CCDC25-201ENST00000356537 TRMT2AQ8IZ69 625 aaKnown RBP12.59□□□□□ -0.39
CCDC25-201ENST00000356537 RBM19Q9Y4C8 960 aaKnown RBP12.59□□□□□ -0.39
CCDC25-201ENST00000356537 APAF1O14727 1248 aa12.59□□□□□ -0.39
CCDC25-201ENST00000356537 EXOC6Q8TAG9 804 aa12.58□□□□□ -0.4
CCDC25-201ENST00000356537 MORC1Q86VD1 984 aa12.58□□□□□ -0.4
CCDC25-201ENST00000356537 CGNL1Q0VF96 1302 aa12.57□□□□□ -0.4
CCDC25-201ENST00000356537 STAG3Q9UJ98 1225 aa12.57□□□□□ -0.4
CCDC25-201ENST00000356537 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.57□□□□□ -0.4
CCDC25-201ENST00000356537 FER1L4A9Z1Z3 1794 aa12.57□□□□□ -0.4
CCDC25-201ENST00000356537 CPS1P31327 1500 aa12.57□□□□□ -0.4
CCDC25-201ENST00000356537 MTHFSP49914 203 aa12.57□□□□□ -0.4
CCDC25-201ENST00000356537 CDK19Q9BWU1 502 aa12.57□□□□□ -0.4
CCDC25-201ENST00000356537 SRPK2P78362 688 aaKnown RBP12.56□□□□□ -0.4
CCDC25-201ENST00000356537 C20orf194Q5TEA3 1177 aa12.56□□□□□ -0.4
CCDC25-201ENST00000356537 TNRQ92752 1358 aa12.56□□□□□ -0.4
CCDC25-201ENST00000356537 ADGRB2O60241 1585 aa12.56□□□□□ -0.4
CCDC25-201ENST00000356537 SLFN5Q08AF3 891 aa12.56□□□□□ -0.4
CCDC25-201ENST00000356537 ADAMTS13Q76LX8 1427 aa12.56□□□□□ -0.4
CCDC25-201ENST00000356537 FYB1O15117 783 aa12.55□□□□□ -0.4
CCDC25-201ENST00000356537 MAP2P11137 1827 aaKnown RBP12.55□□□□□ -0.4
CCDC25-201ENST00000356537 NINLQ9Y2I6 1382 aa12.55□□□□□ -0.4
CCDC25-201ENST00000356537 CEBPAP49715 358 aaPredicted RBP12.55□□□□□ -0.4
CCDC25-201ENST00000356537 AKAP12Q02952 1782 aa12.55□□□□□ -0.4
CCDC25-201ENST00000356537 NSD2O96028 1365 aa12.55□□□□□ -0.4
CCDC25-201ENST00000356537 MON2Q7Z3U7 1717 aa12.55□□□□□ -0.4
CCDC25-201ENST00000356537 MED14O60244 1454 aa12.54□□□□□ -0.4
CCDC25-201ENST00000356537 TECPR2O15040 1411 aa12.54□□□□□ -0.4
CCDC25-201ENST00000356537 ATAD2Q6PL18 1390 aa12.54□□□□□ -0.4
CCDC25-201ENST00000356537 TMEM2Q9UHN6 1383 aa12.54□□□□□ -0.4
CCDC25-201ENST00000356537 GGNBP2Q9H3C7 697 aa12.54□□□□□ -0.4
CCDC25-201ENST00000356537 POGKQ9P215 609 aa12.54□□□□□ -0.4
CCDC25-201ENST00000356537 CABP1Q9NZU7 370 aa12.54□□□□□ -0.4
CCDC25-201ENST00000356537 NCKAP5LQ9HCH0 1330 aa12.53□□□□□ -0.4
CCDC25-201ENST00000356537 LTKP29376 864 aa12.53□□□□□ -0.4
CCDC25-201ENST00000356537 GOLGA2Q08379 1002 aa12.52□□□□□ -0.4
CCDC25-201ENST00000356537 TOPAZ1Q8N9V7 1692 aa12.52□□□□□ -0.41
CCDC25-201ENST00000356537 CPSF1Q10570 1443 aaKnown RBP12.52□□□□□ -0.41
CCDC25-201ENST00000356537 FBLN1P23142 703 aa12.51□□□□□ -0.41
CCDC25-201ENST00000356537 TXNDC2Q86VQ3 553 aa12.51□□□□□ -0.41
CCDC25-201ENST00000356537 ROBO2Q9HCK4 1378 aa12.51□□□□□ -0.41
CCDC25-201ENST00000356537 WWC1Q8IX03 1113 aa12.51□□□□□ -0.41
CCDC25-201ENST00000356537 PTPRUQ92729 1446 aa12.51□□□□□ -0.41
CCDC25-201ENST00000356537 ATP7BP35670 1465 aa12.51□□□□□ -0.41
CCDC25-201ENST00000356537 NRKQ7Z2Y5 1582 aa12.5□□□□□ -0.41
CCDC25-201ENST00000356537 NKTRP30414 1462 aaKnown RBP12.5□□□□□ -0.41
CCDC25-201ENST00000356537 CCDC136Q96JN2 1154 aa12.5□□□□□ -0.41
CCDC25-201ENST00000356537 RRP7AQ9Y3A4 280 aaKnown RBP12.5□□□□□ -0.41
CCDC25-201ENST00000356537 ITSN1Q15811 1721 aa12.5□□□□□ -0.41
CCDC25-201ENST00000356537 CDC42BPGQ6DT37 1551 aa12.5□□□□□ -0.41
CCDC25-201ENST00000356537 FAM135BQ49AJ0 1406 aa12.49□□□□□ -0.41
CCDC25-201ENST00000356537 RGPD8O14715 1765 aaPredicted RBP12.49□□□□□ -0.41
CCDC25-201ENST00000356537 CRBNQ96SW2 442 aa12.49□□□□□ -0.41
CCDC25-201ENST00000356537 SLIT1O75093 1534 aa12.49□□□□□ -0.41
CCDC25-201ENST00000356537 ARHGAP23Q9P227 1491 aa12.48□□□□□ -0.41
CCDC25-201ENST00000356537 PLEKHF1Q96S99 279 aa12.48□□□□□ -0.41
CCDC25-201ENST00000356537 PRR36Q9H6K5 1346 aa12.48□□□□□ -0.41
CCDC25-201ENST00000356537 PNPLA6Q8IY17 1366 aa12.48□□□□□ -0.41
CCDC25-201ENST00000356537 TCP11L2Q8N4U5 519 aa12.48□□□□□ -0.41
CCDC25-201ENST00000356537 PPIP5K1Q6PFW1 1433 aa12.48□□□□□ -0.41
CCDC25-201ENST00000356537 WASLO00401 505 aaPredicted RBP12.47□□□□□ -0.41
CCDC25-201ENST00000356537 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.47□□□□□ -0.41
CCDC25-201ENST00000356537 BCAR3O75815 825 aa12.47□□□□□ -0.41
CCDC25-201ENST00000356537 SKAP1Q86WV1 359 aa12.47□□□□□ -0.41
CCDC25-201ENST00000356537 ESF1Q9H501 851 aaKnown RBP12.47□□□□□ -0.41
CCDC25-201ENST00000356537 PLEKHG1Q9ULL1 1385 aa12.47□□□□□ -0.41
CCDC25-201ENST00000356537 RUNDC1Q96C34 613 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 155.8 ms