RNA–Protein interactions for RNA: ENST00000356415.5

RAP1A-201, Transcript of RAP1A, member of RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAP1A, Length 1,586 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1A-201ENST00000356415 C11orf95C9JLR9 678 aaPredicted RBP18.35■□□□□ 0.53
RAP1A-201ENST00000356415 SRPK2P78362 688 aaKnown RBP18.33■□□□□ 0.52
RAP1A-201ENST00000356415 DISP3Q9P2K9 1392 aa18.32■□□□□ 0.52
RAP1A-201ENST00000356415 XRN1Q8IZH2 1706 aaKnown RBP18.32■□□□□ 0.52
RAP1A-201ENST00000356415 NKTRP30414 1462 aaKnown RBP18.32■□□□□ 0.52
RAP1A-201ENST00000356415 CDK19Q9BWU1 502 aa18.32■□□□□ 0.52
RAP1A-201ENST00000356415 ARHGEF28Q8N1W1 1705 aaKnown RBP18.32■□□□□ 0.52
RAP1A-201ENST00000356415 KIF7Q2M1P5 1343 aa18.31■□□□□ 0.52
RAP1A-201ENST00000356415 WASHC2AQ641Q2 1341 aa18.31■□□□□ 0.52
RAP1A-201ENST00000356415 CHD2O14647 1828 aaKnown RBP18.31■□□□□ 0.52
RAP1A-201ENST00000356415 WASLO00401 505 aaPredicted RBP18.31■□□□□ 0.52
RAP1A-201ENST00000356415 KNDC1Q76NI1 1749 aa18.31■□□□□ 0.52
RAP1A-201ENST00000356415 NWD1Q149M9 1564 aa18.3■□□□□ 0.52
RAP1A-201ENST00000356415 CABP2Q9NPB3 220 aa18.3■□□□□ 0.52
RAP1A-201ENST00000356415 TMEM94Q12767 1356 aa18.3■□□□□ 0.52
RAP1A-201ENST00000356415 CCDC7Q96M83 1385 aa18.29■□□□□ 0.52
RAP1A-201ENST00000356415 PUS7Q96PZ0 661 aaKnown RBP18.29■□□□□ 0.52
RAP1A-201ENST00000356415 C19orf44Q9H6X5 657 aa18.29■□□□□ 0.52
RAP1A-201ENST00000356415 NCOA3Q9Y6Q9 1424 aa18.27■□□□□ 0.51
RAP1A-201ENST00000356415 QRICH2Q9H0J4 1663 aa18.26■□□□□ 0.51
RAP1A-201ENST00000356415 NUTM2FA1L443 756 aa18.25■□□□□ 0.51
RAP1A-201ENST00000356415 DDX10Q13206 875 aaKnown RBP18.25■□□□□ 0.51
RAP1A-201ENST00000356415 TMC1Q8TDI8 760 aa18.25■□□□□ 0.51
RAP1A-201ENST00000356415 ADGRL3Q9HAR2 1447 aa18.25■□□□□ 0.51
RAP1A-201ENST00000356415 ATF3P18847 181 aa18.24■□□□□ 0.51
RAP1A-201ENST00000356415 NUDT16Q96DE0 195 aaKnown RBP18.24■□□□□ 0.51
RAP1A-201ENST00000356415 LRRC7Q96NW7 1537 aa18.23■□□□□ 0.51
RAP1A-201ENST00000356415 TULP4Q9NRJ4 1543 aa18.23■□□□□ 0.51
RAP1A-201ENST00000356415 MSH6P52701 1360 aa18.23■□□□□ 0.51
RAP1A-201ENST00000356415 ATAD2Q6PL18 1390 aa18.23■□□□□ 0.51
RAP1A-201ENST00000356415 CCDC61Q9Y6R9 512 aa18.22■□□□□ 0.51
RAP1A-201ENST00000356415 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.21■□□□□ 0.51
RAP1A-201ENST00000356415 CADPS2Q86UW7 1296 aa18.21■□□□□ 0.51
RAP1A-201ENST00000356415 STRCP1A6NGW2 1772 aa18.2■□□□□ 0.5
RAP1A-201ENST00000356415 SLC12A5Q9H2X9 1139 aa18.2■□□□□ 0.5
RAP1A-201ENST00000356415 CABP1Q9NZU7 370 aa18.19■□□□□ 0.5
RAP1A-201ENST00000356415 PRR36Q9H6K5 1346 aa18.18■□□□□ 0.5
RAP1A-201ENST00000356415 ADGRB2O60241 1585 aa18.18■□□□□ 0.5
RAP1A-201ENST00000356415 PANK3Q9H999 370 aa18.17■□□□□ 0.5
RAP1A-201ENST00000356415 LTBP4Q8N2S1 1624 aa18.16■□□□□ 0.5
RAP1A-201ENST00000356415 NINLQ9Y2I6 1382 aa18.16■□□□□ 0.5
RAP1A-201ENST00000356415 DCCP43146 1447 aa18.15■□□□□ 0.5
RAP1A-201ENST00000356415 ESCO1Q5FWF5 840 aa18.15■□□□□ 0.5
RAP1A-201ENST00000356415 TERF2IPQ9NYB0 399 aa18.15■□□□□ 0.5
RAP1A-201ENST00000356415 ANKARQ7Z5J8 1434 aa18.14■□□□□ 0.5
RAP1A-201ENST00000356415 HDGFL2Q7Z4V5 671 aaPredicted RBP18.14■□□□□ 0.49
RAP1A-201ENST00000356415 CDC42BPGQ6DT37 1551 aa18.14■□□□□ 0.49
RAP1A-201ENST00000356415 PPIP5K1Q6PFW1 1433 aa18.14■□□□□ 0.49
RAP1A-201ENST00000356415 PMFBP1Q8TBY8 1022 aa18.13■□□□□ 0.49
RAP1A-201ENST00000356415 PLEKHG3A1L390 1219 aa18.13■□□□□ 0.49
RAP1A-201ENST00000356415 NGDNQ8NEJ9 315 aaKnown RBP18.13■□□□□ 0.49
RAP1A-201ENST00000356415 SLAIN2Q9P270 581 aa18.13■□□□□ 0.49
RAP1A-201ENST00000356415 NALCNQ8IZF0 1738 aa18.12■□□□□ 0.49
RAP1A-201ENST00000356415 ATP7BP35670 1465 aa18.12■□□□□ 0.49
RAP1A-201ENST00000356415 PHF8Q9UPP1 1060 aa18.12■□□□□ 0.49
RAP1A-201ENST00000356415 DIEXFQ68CQ4 756 aaKnown RBP18.11■□□□□ 0.49
RAP1A-201ENST00000356415 ORAI2Q96SN7 254 aa18.11■□□□□ 0.49
RAP1A-201ENST00000356415 ZNF692Q9BU19 519 aaPredicted RBP18.11■□□□□ 0.49
RAP1A-201ENST00000356415 C1orf167Q5SNV9 1468 aa18.1■□□□□ 0.49
RAP1A-201ENST00000356415 ACEP12821 1306 aa18.1■□□□□ 0.49
RAP1A-201ENST00000356415 KNSTRNQ9Y448 316 aa18.09■□□□□ 0.49
RAP1A-201ENST00000356415 ANKRD36BQ8N2N9 1353 aa18.09■□□□□ 0.49
RAP1A-201ENST00000356415 MST1RQ04912 1400 aa18.09■□□□□ 0.49
RAP1A-201ENST00000356415 CERKQ8TCT0 537 aa18.08■□□□□ 0.49
RAP1A-201ENST00000356415 CARD14Q9BXL6 1004 aa18.07■□□□□ 0.48
RAP1A-201ENST00000356415 A0A1W2PP64 1363 aa18.06■□□□□ 0.48
RAP1A-201ENST00000356415 PER1O15534 1290 aaPredicted RBP18.06■□□□□ 0.48
RAP1A-201ENST00000356415 TOM1O60784 492 aa18.06■□□□□ 0.48
RAP1A-201ENST00000356415 FMN2Q9NZ56 1722 aa18.06■□□□□ 0.48
RAP1A-201ENST00000356415 KTN1Q86UP2 1357 aaKnown RBP18.05■□□□□ 0.48
RAP1A-201ENST00000356415 FOXO3O43524 673 aa18.05■□□□□ 0.48
RAP1A-201ENST00000356415 PSME1Q06323 249 aa18.05■□□□□ 0.48
RAP1A-201ENST00000356415 CNGB1Q14028 1251 aaPredicted RBP18.04■□□□□ 0.48
RAP1A-201ENST00000356415 CPSF1Q10570 1443 aaKnown RBP18.04■□□□□ 0.48
RAP1A-201ENST00000356415 POLR3AO14802 1390 aaPredicted RBP18.03■□□□□ 0.48
RAP1A-201ENST00000356415 BRINP3Q76B58 766 aa18.03■□□□□ 0.48
RAP1A-201ENST00000356415 USP32Q8NFA0 1604 aa18.03■□□□□ 0.48
RAP1A-201ENST00000356415 XIRP1Q702N8 1843 aaKnown RBP18.02■□□□□ 0.48
RAP1A-201ENST00000356415 UBAP1LF5GYI3 381 aa18.02■□□□□ 0.48
RAP1A-201ENST00000356415 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.02■□□□□ 0.481e-6■■■□□ 16.6
RAP1A-201ENST00000356415 CD163L1Q9NR16 1453 aa18.02■□□□□ 0.48
RAP1A-201ENST00000356415 NSD3Q9BZ95 1437 aa18.01■□□□□ 0.47
RAP1A-201ENST00000356415 CGNL1Q0VF96 1302 aa18.01■□□□□ 0.47
RAP1A-201ENST00000356415 ANP32CO43423 234 aa18■□□□□ 0.47
RAP1A-201ENST00000356415 NPHP3Q7Z494 1330 aa18■□□□□ 0.47
RAP1A-201ENST00000356415 PAK3O75914 559 aaPredicted RBP18■□□□□ 0.47
RAP1A-201ENST00000356415 CC2D1BQ5T0F9 858 aaKnown RBP18■□□□□ 0.47
RAP1A-201ENST00000356415 KRT28Q7Z3Y7 464 aa18■□□□□ 0.47
RAP1A-201ENST00000356415 MYOM1P52179 1685 aa17.99■□□□□ 0.47
RAP1A-201ENST00000356415 PIP4K2BP78356 416 aa17.99■□□□□ 0.47
RAP1A-201ENST00000356415 XPCQ01831 940 aaPredicted RBP17.99■□□□□ 0.47
RAP1A-201ENST00000356415 POTEDQ86YR6 584 aa17.99■□□□□ 0.47
RAP1A-201ENST00000356415 TTC21BQ7Z4L5 1316 aa17.99■□□□□ 0.47
RAP1A-201ENST00000356415 SCAF1Q9H7N4 1312 aaKnown RBP17.99■□□□□ 0.47
RAP1A-201ENST00000356415 USP6P35125 1406 aa17.98■□□□□ 0.47
RAP1A-201ENST00000356415 IQSEC2Q5JU85 1478 aa17.98■□□□□ 0.47
RAP1A-201ENST00000356415 AMER1Q5JTC6 1135 aaPredicted RBP17.98■□□□□ 0.47
RAP1A-201ENST00000356415 DDX17Q92841 729 aaKnown RBP17.98■□□□□ 0.47
RAP1A-201ENST00000356415 EDC4Q6P2E9 1401 aaKnown RBP17.98■□□□□ 0.47
RAP1A-201ENST00000356415 TOPAZ1Q8N9V7 1692 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms