RNA–Protein interactions for RNA: ENST00000356005.8

FN1-204, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,846 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-204ENST00000356005 KIAA0586Q9BVV6 1533 aa13.79□□□□□ -0.2
FN1-204ENST00000356005 CD109Q6YHK3 1445 aa13.79□□□□□ -0.2
FN1-204ENST00000356005 RPGRIP1LQ68CZ1 1315 aa13.79□□□□□ -0.2
FN1-204ENST00000356005 NUTM2BA6NNL0 878 aaPredicted RBP13.78□□□□□ -0.2
FN1-204ENST00000356005 NUTM2EB1AL46 878 aaPredicted RBP13.78□□□□□ -0.2
FN1-204ENST00000356005 DHX16O60231 1041 aaKnown RBP13.78□□□□□ -0.2
FN1-204ENST00000356005 SLC3A2P08195 630 aaKnown RBP13.78□□□□□ -0.2
FN1-204ENST00000356005 NUTM2AQ8IVF1 878 aaPredicted RBP13.78□□□□□ -0.2
FN1-204ENST00000356005 CLUAP1Q96AJ1 413 aa13.78□□□□□ -0.2
FN1-204ENST00000356005 REC8O95072 547 aa13.78□□□□□ -0.2
FN1-204ENST00000356005 PPP1R1BQ9UD71 204 aaPredicted RBP13.78□□□□□ -0.2
FN1-204ENST00000356005 RRP7AQ9Y3A4 280 aaKnown RBP13.78□□□□□ -0.2
FN1-204ENST00000356005 GNL3LQ9NVN8 582 aaKnown RBP13.77□□□□□ -0.21
FN1-204ENST00000356005 ANKRD45Q5TZF3 282 aa13.77□□□□□ -0.21
FN1-204ENST00000356005 LRPPRCP42704 1394 aaKnown RBP13.76□□□□□ -0.21
FN1-204ENST00000356005 TPM1P09493 284 aa13.76□□□□□ -0.21
FN1-204ENST00000356005 CCDC30Q5VVM6 783 aa13.76□□□□□ -0.21
FN1-204ENST00000356005 DAPK1P53355 1430 aa13.76□□□□□ -0.21
FN1-204ENST00000356005 TEX14Q8IWB6 1497 aa13.76□□□□□ -0.21
FN1-204ENST00000356005 WWC2Q6AWC2 1192 aa13.76□□□□□ -0.21
FN1-204ENST00000356005 TPM3P06753 285 aa13.75□□□□□ -0.21
FN1-204ENST00000356005 PNISRQ8TF01 805 aaKnown RBP13.75□□□□□ -0.21
FN1-204ENST00000356005 CPLX1O14810 134 aa13.75□□□□□ -0.21
FN1-204ENST00000356005 TBC1D2BQ9UPU7 963 aa13.74□□□□□ -0.21
FN1-204ENST00000356005 SPRYD3Q8NCJ5 442 aa13.74□□□□□ -0.21
FN1-204ENST00000356005 R3HCC1Q9Y3T6 440 aaKnown RBP13.74□□□□□ -0.21
FN1-204ENST00000356005 CREBRFQ8IUR6 639 aa13.74□□□□□ -0.21
FN1-204ENST00000356005 PRDM11Q9NQV5 511 aa13.74□□□□□ -0.21
FN1-204ENST00000356005 ELL2O00472 640 aaPredicted RBP13.74□□□□□ -0.21
FN1-204ENST00000356005 CABP4P57796 275 aa13.74□□□□□ -0.21
FN1-204ENST00000356005 AAMPQ13685 434 aa13.74□□□□□ -0.21
FN1-204ENST00000356005 NINLQ9Y2I6 1382 aa13.74□□□□□ -0.21
FN1-204ENST00000356005 XBP1P17861 261 aa13.74□□□□□ -0.21
FN1-204ENST00000356005 NUTM2GQ5VZR2 741 aa13.73□□□□□ -0.21
FN1-204ENST00000356005 BRMS1Q9HCU9 246 aa13.73□□□□□ -0.21
FN1-204ENST00000356005 CCDC27Q2M243 656 aa13.73□□□□□ -0.21
FN1-204ENST00000356005 ANKRD30BQ9BXX2 1392 aa13.73□□□□□ -0.21
FN1-204ENST00000356005 NFXL1Q6ZNB6 911 aa13.73□□□□□ -0.21
FN1-204ENST00000356005 ANKRD20A12PQ8NF67 263 aa13.73□□□□□ -0.21
FN1-204ENST00000356005 CCDC141Q6ZP82 1450 aa13.73□□□□□ -0.21
FN1-204ENST00000356005 FAM135AQ9P2D6 1515 aa13.73□□□□□ -0.21
FN1-204ENST00000356005 CENPQQ7L2Z9 268 aaPredicted RBP13.73□□□□□ -0.21
FN1-204ENST00000356005 SAFBQ15424 915 aaKnown RBP eCLIP13.73□□□□□ -0.21
FN1-204ENST00000356005 CABP2Q9NPB3 220 aa13.73□□□□□ -0.21
FN1-204ENST00000356005 PRAM1Q96QH2 718 aa13.72□□□□□ -0.21
FN1-204ENST00000356005 RTEL1-TNFRSF6BF6WH68 1400 aa13.72□□□□□ -0.21
FN1-204ENST00000356005 NECTIN2Q92692 538 aa13.72□□□□□ -0.21
FN1-204ENST00000356005 RALYLQ86SE5 291 aaKnown RBP13.72□□□□□ -0.21
FN1-204ENST00000356005 KCNH5Q8NCM2 988 aa13.72□□□□□ -0.21
FN1-204ENST00000356005 WDHD1O75717 1129 aaPredicted RBP13.72□□□□□ -0.21
FN1-204ENST00000356005 ZNF644Q9H582 1327 aaPredicted RBP13.71□□□□□ -0.21
FN1-204ENST00000356005 ABCA10Q8WWZ4 1543 aa13.71□□□□□ -0.21
FN1-204ENST00000356005 PES1O00541 588 aaKnown RBP13.71□□□□□ -0.21
FN1-204ENST00000356005 TIAM1Q13009 1591 aa13.71□□□□□ -0.21
FN1-204ENST00000356005 AKNAQ7Z591 1439 aa13.71□□□□□ -0.21
FN1-204ENST00000356005 PPP6R1Q9UPN7 881 aa13.71□□□□□ -0.21
FN1-204ENST00000356005 SART3Q15020 963 aaKnown RBP13.71□□□□□ -0.21
FN1-204ENST00000356005 RBM42Q9BTD8 480 aaKnown RBP13.71□□□□□ -0.21
FN1-204ENST00000356005 A0A0U1RQG5 324 aaPredicted RBP13.7□□□□□ -0.22
FN1-204ENST00000356005 ZNF652Q9Y2D9 606 aa13.7□□□□□ -0.22
FN1-204ENST00000356005 HMOX1P09601 288 aa13.7□□□□□ -0.22
FN1-204ENST00000356005 AIMP1Q12904 312 aaKnown RBP13.7□□□□□ -0.22
FN1-204ENST00000356005 ERBINQ96RT1 1412 aa13.7□□□□□ -0.22
FN1-204ENST00000356005 UBTFL1P0CB47 393 aaPredicted RBP13.7□□□□□ -0.22
FN1-204ENST00000356005 IKQ13123 557 aaPredicted RBP13.7□□□□□ -0.22
FN1-204ENST00000356005 PTPN23Q9H3S7 1636 aa13.69□□□□□ -0.22
FN1-204ENST00000356005 ADGRL1O94910 1474 aa13.69□□□□□ -0.22
FN1-204ENST00000356005 CNTLNQ9NXG0 1405 aa13.69□□□□□ -0.22
FN1-204ENST00000356005 BICRAQ9NZM4 1560 aa13.69□□□□□ -0.22
FN1-204ENST00000356005 TMEM132EQ6IEE7 984 aa13.69□□□□□ -0.22
FN1-204ENST00000356005 CDK19Q9BWU1 502 aa13.69□□□□□ -0.22
FN1-204ENST00000356005 RAPGEF3O95398 923 aa13.69□□□□□ -0.22
FN1-204ENST00000356005 GRIN2AQ12879 1464 aa13.69□□□□□ -0.22
FN1-204ENST00000356005 ATAD2Q6PL18 1390 aa13.68□□□□□ -0.22
FN1-204ENST00000356005 ERC1Q8IUD2 1116 aa13.68□□□□□ -0.22
FN1-204ENST00000356005 HIP1O00291 1037 aa13.68□□□□□ -0.22
FN1-204ENST00000356005 CCDC7Q96M83 1385 aa13.68□□□□□ -0.22
FN1-204ENST00000356005 GOLGA6L19H0YKK7 550 aa13.68□□□□□ -0.22
FN1-204ENST00000356005 MTHFSP49914 203 aa13.68□□□□□ -0.22
FN1-204ENST00000356005 MCTP1Q6DN14 999 aa13.67□□□□□ -0.22
FN1-204ENST00000356005 DZIP1LQ8IYY4 767 aaKnown RBP13.67□□□□□ -0.22
FN1-204ENST00000356005 NEUROD6Q96NK8 337 aa13.67□□□□□ -0.22
FN1-204ENST00000356005 PLB1Q6P1J6 1458 aa13.67□□□□□ -0.22
FN1-204ENST00000356005 KIAA1107Q9UPP5 1409 aa13.67□□□□□ -0.22
FN1-204ENST00000356005 STARD3NLO95772 234 aa13.66□□□□□ -0.22
FN1-204ENST00000356005 KIF21AQ7Z4S6 1674 aa13.66□□□□□ -0.22
FN1-204ENST00000356005 GNAI3P08754 354 aa13.66□□□□□ -0.22
FN1-204ENST00000356005 GOLGA6L1Q8N7Z2 621 aa13.66□□□□□ -0.22
FN1-204ENST00000356005 CNNM1Q9NRU3 951 aa13.66□□□□□ -0.22
FN1-204ENST00000356005 DDX54Q8TDD1 881 aaKnown RBP13.66□□□□□ -0.22
FN1-204ENST00000356005 APAF1O14727 1248 aa13.66□□□□□ -0.22
FN1-204ENST00000356005 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.66□□□□□ -0.22
FN1-204ENST00000356005 BIVM-ERCC5R4GMW8 1640 aa13.65□□□□□ -0.22
FN1-204ENST00000356005 PLIN1O60240 522 aa13.65□□□□□ -0.22
FN1-204ENST00000356005 NAP1L5Q96NT1 182 aaPredicted RBP13.65□□□□□ -0.22
FN1-204ENST00000356005 ANO2Q9NQ90 1003 aa13.65□□□□□ -0.22
FN1-204ENST00000356005 IPO7O95373 1038 aaKnown RBP13.64□□□□□ -0.23
FN1-204ENST00000356005 CCDC70Q6NSX1 233 aa13.64□□□□□ -0.23
FN1-204ENST00000356005 ZBED9Q6R2W3 1325 aa13.64□□□□□ -0.23
FN1-204ENST00000356005 SETD1BQ9UPS6 1966 aaKnown RBP13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms