RNA–Protein interactions for RNA: ENST00000355547.9

PDZD3-202, Transcript of PDZ domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZD3, Length 2,252 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD3-202ENST00000355547 NOS1P29475 1434 aa23.45■■□□□ 1.34
PDZD3-202ENST00000355547 CFAP74Q9C0B2 1584 aa23.45■■□□□ 1.34
PDZD3-202ENST00000355547 CGNL1Q0VF96 1302 aa23.45■■□□□ 1.34
PDZD3-202ENST00000355547 C14orf93Q9H972 538 aaKnown RBP23.43■■□□□ 1.34
PDZD3-202ENST00000355547 NSD3Q9BZ95 1437 aa23.41■■□□□ 1.34
PDZD3-202ENST00000355547 SHPRHQ149N8 1683 aa23.41■■□□□ 1.34
PDZD3-202ENST00000355547 ZNF518AQ6AHZ1 1483 aa23.41■■□□□ 1.34
PDZD3-202ENST00000355547 RGS3P49796 1198 aa23.4■■□□□ 1.34
PDZD3-202ENST00000355547 PHF23Q9BUL5 403 aaPredicted RBP23.4■■□□□ 1.34
PDZD3-202ENST00000355547 ADGRB1O14514 1584 aa23.4■■□□□ 1.34
PDZD3-202ENST00000355547 MORC1Q86VD1 984 aa23.4■■□□□ 1.34
PDZD3-202ENST00000355547 ZC3H13Q5T200 1668 aaKnown RBP23.39■■□□□ 1.34
PDZD3-202ENST00000355547 IGHDP01880 384 aa23.39■■□□□ 1.34
PDZD3-202ENST00000355547 RUNDC1Q96C34 613 aa23.38■■□□□ 1.33
PDZD3-202ENST00000355547 USP32Q8NFA0 1604 aa23.38■■□□□ 1.33
PDZD3-202ENST00000355547 NPATQ14207 1427 aa23.37■■□□□ 1.33
PDZD3-202ENST00000355547 IQSEC2Q5JU85 1478 aa23.37■■□□□ 1.33
PDZD3-202ENST00000355547 PPLO60437 1756 aa23.37■■□□□ 1.33
PDZD3-202ENST00000355547 RPGRIP1LQ68CZ1 1315 aa23.37■■□□□ 1.33
PDZD3-202ENST00000355547 CLUAP1Q96AJ1 413 aa23.36■■□□□ 1.33
PDZD3-202ENST00000355547 SLC12A5Q9H2X9 1139 aa23.36■■□□□ 1.33
PDZD3-202ENST00000355547 DAXXQ9UER7 740 aaPredicted RBP23.36■■□□□ 1.33
PDZD3-202ENST00000355547 TRAK1Q9UPV9 953 aa23.36■■□□□ 1.33
PDZD3-202ENST00000355547 POGZQ7Z3K3 1410 aa23.36■■□□□ 1.33
PDZD3-202ENST00000355547 SLC4A3P48751 1232 aa23.36■■□□□ 1.33
PDZD3-202ENST00000355547 NFKBIBQ15653 356 aa23.35■■□□□ 1.33
PDZD3-202ENST00000355547 PUS7Q96PZ0 661 aaKnown RBP23.35■■□□□ 1.33
PDZD3-202ENST00000355547 QRICH2Q9H0J4 1663 aa23.35■■□□□ 1.33
PDZD3-202ENST00000355547 AAMPQ13685 434 aa23.35■■□□□ 1.33
PDZD3-202ENST00000355547 WDR63Q8IWG1 891 aa23.34■■□□□ 1.33
PDZD3-202ENST00000355547 NCBP3Q53F19 620 aaKnown RBP23.34■■□□□ 1.33
PDZD3-202ENST00000355547 RICTORQ6R327 1708 aa23.33■■□□□ 1.32
PDZD3-202ENST00000355547 CHGAP10645 457 aaKnown RBP23.33■■□□□ 1.32
PDZD3-202ENST00000355547 RARSP54136 660 aaKnown RBP23.33■■□□□ 1.32
PDZD3-202ENST00000355547 CCDC27Q2M243 656 aa23.33■■□□□ 1.32
PDZD3-202ENST00000355547 TCP11L2Q8N4U5 519 aa23.33■■□□□ 1.32
PDZD3-202ENST00000355547 PANK1Q8TE04 598 aa23.33■■□□□ 1.32
PDZD3-202ENST00000355547 MAPK8IP3Q9UPT6 1336 aa23.32■■□□□ 1.32
PDZD3-202ENST00000355547 FRMPD1Q5SYB0 1578 aa23.32■■□□□ 1.32
PDZD3-202ENST00000355547 COG6Q9Y2V7 657 aa23.31■■□□□ 1.32
PDZD3-202ENST00000355547 MLH3Q9UHC1 1453 aa23.31■■□□□ 1.32
PDZD3-202ENST00000355547 CANXP27824 592 aaKnown RBP23.3■■□□□ 1.32
PDZD3-202ENST00000355547 USP19O94966 1318 aa23.29■■□□□ 1.32
PDZD3-202ENST00000355547 VIRMAQ69YN4 1812 aaKnown RBP23.29■■□□□ 1.32
PDZD3-202ENST00000355547 MTHFSP49914 203 aa23.29■■□□□ 1.32
PDZD3-202ENST00000355547 TMEM132EQ6IEE7 984 aa23.28■■□□□ 1.32
PDZD3-202ENST00000355547 TNNT2P45379 298 aaPredicted RBP23.28■■□□□ 1.32
PDZD3-202ENST00000355547 CFAP53Q96M91 514 aa23.27■■□□□ 1.32
PDZD3-202ENST00000355547 RRP7AQ9Y3A4 280 aaKnown RBP23.27■■□□□ 1.32
PDZD3-202ENST00000355547 NSD2O96028 1365 aa23.27■■□□□ 1.32
PDZD3-202ENST00000355547 HECW2Q9P2P5 1572 aa23.27■■□□□ 1.31
PDZD3-202ENST00000355547 GSE1Q14687 1217 aa23.26■■□□□ 1.31
PDZD3-202ENST00000355547 NEUROD2Q15784 382 aa23.26■■□□□ 1.31
PDZD3-202ENST00000355547 ABCC3O15438 1527 aa23.25■■□□□ 1.31
PDZD3-202ENST00000355547 PMFBP1Q8TBY8 1022 aa23.25■■□□□ 1.31
PDZD3-202ENST00000355547 ZMYM3Q14202 1370 aa23.25■■□□□ 1.31
PDZD3-202ENST00000355547 ANKRD36BQ8N2N9 1353 aa23.25■■□□□ 1.31
PDZD3-202ENST00000355547 FRAT1Q92837 279 aaPredicted RBP23.24■■□□□ 1.31
PDZD3-202ENST00000355547 GGT6Q6P531 493 aa23.24■■□□□ 1.31
PDZD3-202ENST00000355547 EVC2Q86UK5 1308 aa23.23■■□□□ 1.31
PDZD3-202ENST00000355547 TULP4Q9NRJ4 1543 aa23.22■■□□□ 1.31
PDZD3-202ENST00000355547 YEATS2Q9ULM3 1422 aa23.22■■□□□ 1.31
PDZD3-202ENST00000355547 RLBP1P12271 317 aa23.22■■□□□ 1.31
PDZD3-202ENST00000355547 PCDHB15Q9Y5E8 787 aa23.21■■□□□ 1.31
PDZD3-202ENST00000355547 MYH16Q9H6N6 1097 aa23.2■■□□□ 1.3
PDZD3-202ENST00000355547 PIK3C2BO00750 1634 aa23.2■■□□□ 1.3
PDZD3-202ENST00000355547 VGFO15240 615 aaPredicted RBP23.2■■□□□ 1.3
PDZD3-202ENST00000355547 CFAP65Q6ZU64 1925 aaKnown RBP23.19■■□□□ 1.3
PDZD3-202ENST00000355547 ARHGEF28Q8N1W1 1705 aaKnown RBP23.19■■□□□ 1.3
PDZD3-202ENST00000355547 SEC24BO95487 1268 aa23.19■■□□□ 1.3
PDZD3-202ENST00000355547 ADGRB2O60241 1585 aa23.18■■□□□ 1.3
PDZD3-202ENST00000355547 CAMSAP1Q5T5Y3 1602 aa23.18■■□□□ 1.3
PDZD3-202ENST00000355547 NEXMIFQ5QGS0 1516 aa23.18■■□□□ 1.3
PDZD3-202ENST00000355547 IL27Q8NEV9 243 aa23.18■■□□□ 1.3
PDZD3-202ENST00000355547 NLRP1Q9C000 1473 aa23.17■■□□□ 1.3
PDZD3-202ENST00000355547 TNNQ9UQP3 1299 aa23.17■■□□□ 1.3
PDZD3-202ENST00000355547 CT47B1P0C2W7 299 aaPredicted RBP23.16■■□□□ 1.3
PDZD3-202ENST00000355547 SIGLEC1Q9BZZ2 1709 aa23.16■■□□□ 1.3
PDZD3-202ENST00000355547 U2AF1L5P0DN76 240 aaPredicted RBP23.15■■□□□ 1.3
PDZD3-202ENST00000355547 U2AF1Q01081 240 aaKnown RBP eCLIP23.15■■□□□ 1.3
PDZD3-202ENST00000355547 ZFYVE9O95405 1425 aa23.14■■□□□ 1.3
PDZD3-202ENST00000355547 FRAT2O75474 233 aaPredicted RBP23.14■■□□□ 1.29
PDZD3-202ENST00000355547 RWDD1Q9H446 243 aaPredicted RBP23.14■■□□□ 1.29
PDZD3-202ENST00000355547 DIP2CQ9Y2E4 1556 aa23.13■■□□□ 1.29
PDZD3-202ENST00000355547 PDZRN3Q9UPQ7 1066 aa23.13■■□□□ 1.29
PDZD3-202ENST00000355547 ARHGAP31Q2M1Z3 1444 aa23.13■■□□□ 1.29
PDZD3-202ENST00000355547 ABCC11Q96J66 1382 aa23.13■■□□□ 1.29
PDZD3-202ENST00000355547 BCL2L13Q9BXK5 485 aa23.12■■□□□ 1.29
PDZD3-202ENST00000355547 MVPQ14764 893 aaKnown RBP23.12■■□□□ 1.29
PDZD3-202ENST00000355547 BECN1Q14457 450 aa23.11■■□□□ 1.29
PDZD3-202ENST00000355547 CABP2Q9NPB3 220 aa23.11■■□□□ 1.29
PDZD3-202ENST00000355547 PLEKHF1Q96S99 279 aa23.1■■□□□ 1.29
PDZD3-202ENST00000355547 ZKSCAN2Q63HK3 967 aa23.1■■□□□ 1.29
PDZD3-202ENST00000355547 UBE2Q2Q8WVN8 375 aa23.09■■□□□ 1.29
PDZD3-202ENST00000355547 A0A1W2PP64 1363 aa23.08■■□□□ 1.29
PDZD3-202ENST00000355547 COL3A1P02461 1466 aaPredicted RBP23.08■■□□□ 1.29
PDZD3-202ENST00000355547 NUTM2DQ5VT03 806 aaPredicted RBP23.08■■□□□ 1.29
PDZD3-202ENST00000355547 DZIP1LQ8IYY4 767 aaKnown RBP23.07■■□□□ 1.28
PDZD3-202ENST00000355547 TBC1D32Q96NH3 1257 aa23.07■■□□□ 1.28
PDZD3-202ENST00000355547 IDI1Q13907 227 aa23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms