RNA–Protein interactions for RNA: ENST00000355500.1

COMMD9-202, Transcript of COMM domain containing 9, humanhuman

TSL 2

Gene COMMD9, Length 2,738 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-202ENST00000355500 PRDM10Q9NQV6 1147 aa11.01□□□□□ -0.65
COMMD9-202ENST00000355500 FOXD4L1Q9NU39 408 aa11.01□□□□□ -0.65
COMMD9-202ENST00000355500 KIF7Q2M1P5 1343 aa11□□□□□ -0.65
COMMD9-202ENST00000355500 CEBPAP49715 358 aaPredicted RBP11□□□□□ -0.65
COMMD9-202ENST00000355500 KIF1BO60333 1816 aa11□□□□□ -0.65
COMMD9-202ENST00000355500 THEMISQ8N1K5 641 aaPredicted RBP11□□□□□ -0.65
COMMD9-202ENST00000355500 YTHDC1Q96MU7 727 aaKnown RBP11□□□□□ -0.65
COMMD9-202ENST00000355500 NPHP4O75161 1426 aaPredicted RBP10.99□□□□□ -0.65
COMMD9-202ENST00000355500 NCOA3Q9Y6Q9 1424 aa10.99□□□□□ -0.65
COMMD9-202ENST00000355500 DIP2AQ14689 1571 aa10.99□□□□□ -0.65
COMMD9-202ENST00000355500 HIRIP3Q9BW71 556 aaPredicted RBP10.99□□□□□ -0.65
COMMD9-202ENST00000355500 ALKQ9UM73 1620 aa10.98□□□□□ -0.65
COMMD9-202ENST00000355500 PIK3C2BO00750 1634 aa10.98□□□□□ -0.65
COMMD9-202ENST00000355500 NRXN1Q9ULB1 1477 aa10.98□□□□□ -0.65
COMMD9-202ENST00000355500 INSRP06213 1382 aa10.97□□□□□ -0.65
COMMD9-202ENST00000355500 XIRP1Q702N8 1843 aaKnown RBP10.97□□□□□ -0.65
COMMD9-202ENST00000355500 STRCP1A6NGW2 1772 aa10.97□□□□□ -0.65
COMMD9-202ENST00000355500 SETBP1Q9Y6X0 1596 aa10.97□□□□□ -0.65
COMMD9-202ENST00000355500 ZNF428Q96B54 188 aa10.97□□□□□ -0.65
COMMD9-202ENST00000355500 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.97□□□□□ -0.65
COMMD9-202ENST00000355500 ADGRB3O60242 1522 aa10.97□□□□□ -0.65
COMMD9-202ENST00000355500 NKTRP30414 1462 aaKnown RBP10.96□□□□□ -0.65
COMMD9-202ENST00000355500 SCAF11Q99590 1463 aaKnown RBP10.96□□□□□ -0.66
COMMD9-202ENST00000355500 NOS1P29475 1434 aa10.96□□□□□ -0.66
COMMD9-202ENST00000355500 MYT1LQ9UL68 1186 aa10.95□□□□□ -0.66
COMMD9-202ENST00000355500 NAP1L2Q9ULW6 460 aaPredicted RBP10.95□□□□□ -0.66
COMMD9-202ENST00000355500 PRKRIP1Q9H875 184 aaPredicted RBP10.95□□□□□ -0.66
COMMD9-202ENST00000355500 WASHC2CQ9Y4E1 1318 aa10.95□□□□□ -0.66
COMMD9-202ENST00000355500 ANKLE2Q86XL3 938 aa10.94□□□□□ -0.66
COMMD9-202ENST00000355500 CNPY4Q8N129 248 aa10.94□□□□□ -0.66
COMMD9-202ENST00000355500 LRRC7Q96NW7 1537 aa10.93□□□□□ -0.66
COMMD9-202ENST00000355500 MED1Q15648 1581 aaPredicted RBP10.93□□□□□ -0.66
COMMD9-202ENST00000355500 C11orf95C9JLR9 678 aaPredicted RBP10.93□□□□□ -0.66
COMMD9-202ENST00000355500 SOCS7O14512 581 aa10.93□□□□□ -0.66
COMMD9-202ENST00000355500 ZNF692Q9BU19 519 aaPredicted RBP10.93□□□□□ -0.66
COMMD9-202ENST00000355500 PPLO60437 1756 aa10.92□□□□□ -0.66
COMMD9-202ENST00000355500 CARD11Q9BXL7 1154 aa10.92□□□□□ -0.66
COMMD9-202ENST00000355500 GLIPR1L2Q4G1C9 344 aa10.92□□□□□ -0.66
COMMD9-202ENST00000355500 CHD2O14647 1828 aaKnown RBP10.91□□□□□ -0.66
COMMD9-202ENST00000355500 NCLP19338 710 aaKnown RBP10.91□□□□□ -0.66
COMMD9-202ENST00000355500 NCKAP5LQ9HCH0 1330 aa10.9□□□□□ -0.66
COMMD9-202ENST00000355500 KIF3BO15066 747 aa10.9□□□□□ -0.66
COMMD9-202ENST00000355500 TOM1O60784 492 aa10.9□□□□□ -0.66
COMMD9-202ENST00000355500 DCAF11Q8TEB1 546 aa10.9□□□□□ -0.66
COMMD9-202ENST00000355500 CWC22Q9HCG8 908 aaKnown RBP10.89□□□□□ -0.67
COMMD9-202ENST00000355500 PIK3R4Q99570 1358 aa10.89□□□□□ -0.67
COMMD9-202ENST00000355500 FAM135BQ49AJ0 1406 aa10.89□□□□□ -0.67
COMMD9-202ENST00000355500 CERS3Q8IU89 383 aa10.89□□□□□ -0.67
COMMD9-202ENST00000355500 EIF3AQ14152 1382 aaKnown RBP10.89□□□□□ -0.67
COMMD9-202ENST00000355500 GGT6Q6P531 493 aa10.88□□□□□ -0.67
COMMD9-202ENST00000355500 BRD4O60885 1362 aaPredicted RBP10.88□□□□□ -0.67
COMMD9-202ENST00000355500 SBNO2Q9Y2G9 1366 aa10.88□□□□□ -0.67
COMMD9-202ENST00000355500 RALBP1Q15311 655 aa10.88□□□□□ -0.67
COMMD9-202ENST00000355500 TMEM131LA2VDJ0 1609 aa10.87□□□□□ -0.67
COMMD9-202ENST00000355500 MYOM1P52179 1685 aa10.87□□□□□ -0.67
COMMD9-202ENST00000355500 CLSTN1O94985 981 aa10.87□□□□□ -0.67
COMMD9-202ENST00000355500 ZBED9Q6R2W3 1325 aa10.87□□□□□ -0.67
COMMD9-202ENST00000355500 ZNF335Q9H4Z2 1342 aaPredicted RBP10.87□□□□□ -0.67
COMMD9-202ENST00000355500 TMEM2Q9UHN6 1383 aa10.87□□□□□ -0.67
COMMD9-202ENST00000355500 PARD3Q8TEW0 1356 aa10.86□□□□□ -0.67
COMMD9-202ENST00000355500 NPC1L1Q9UHC9 1359 aa10.86□□□□□ -0.67
COMMD9-202ENST00000355500 RPGRIP1LQ68CZ1 1315 aa10.86□□□□□ -0.67
COMMD9-202ENST00000355500 SLC52A1Q9NWF4 448 aa10.86□□□□□ -0.67
COMMD9-202ENST00000355500 LRPPRCP42704 1394 aaKnown RBP10.85□□□□□ -0.67
COMMD9-202ENST00000355500 ZBTB7CA1YPR0 619 aa10.85□□□□□ -0.67
COMMD9-202ENST00000355500 SECISBP2LQ93073 1101 aaKnown RBP10.85□□□□□ -0.67
COMMD9-202ENST00000355500 ZFYVE9O95405 1425 aa10.85□□□□□ -0.67
COMMD9-202ENST00000355500 PSMD1Q99460 953 aa10.85□□□□□ -0.67
COMMD9-202ENST00000355500 SUPT16HQ9Y5B9 1047 aaKnown RBP10.85□□□□□ -0.67
COMMD9-202ENST00000355500 TESK2Q96S53 571 aa10.84□□□□□ -0.67
COMMD9-202ENST00000355500 USP32Q8NFA0 1604 aa10.84□□□□□ -0.67
COMMD9-202ENST00000355500 ST20-MTHFSA0A0A6YYL1 179 aa10.84□□□□□ -0.67
COMMD9-202ENST00000355500 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.84□□□□□ -0.67
COMMD9-202ENST00000355500 DISP3Q9P2K9 1392 aa10.83□□□□□ -0.68
COMMD9-202ENST00000355500 CDCA8Q53HL2 280 aa10.83□□□□□ -0.68
COMMD9-202ENST00000355500 PRDM16Q9HAZ2 1276 aa10.83□□□□□ -0.68
COMMD9-202ENST00000355500 PLEKHG1Q9ULL1 1385 aa10.83□□□□□ -0.68
COMMD9-202ENST00000355500 MYBBP1AQ9BQG0 1328 aaKnown RBP10.83□□□□□ -0.68
COMMD9-202ENST00000355500 ZNF526Q8TF50 670 aaPredicted RBP10.83□□□□□ -0.68
COMMD9-202ENST00000355500 CHMP4BQ9H444 224 aaKnown RBP10.83□□□□□ -0.68
COMMD9-202ENST00000355500 AHDC1Q5TGY3 1603 aaPredicted RBP10.82□□□□□ -0.68
COMMD9-202ENST00000355500 TEX2Q8IWB9 1127 aa10.82□□□□□ -0.68
COMMD9-202ENST00000355500 PIK3C2GO75747 1445 aa10.82□□□□□ -0.68
COMMD9-202ENST00000355500 DCCP43146 1447 aa10.82□□□□□ -0.68
COMMD9-202ENST00000355500 SHPRHQ149N8 1683 aa10.82□□□□□ -0.68
COMMD9-202ENST00000355500 TMF1P82094 1093 aa10.81□□□□□ -0.68
COMMD9-202ENST00000355500 C1orf115Q9H7X2 142 aa10.81□□□□□ -0.68
COMMD9-202ENST00000355500 ADGRB1O14514 1584 aa10.81□□□□□ -0.68
COMMD9-202ENST00000355500 UBAP1LF5GYI3 381 aa10.81□□□□□ -0.68
COMMD9-202ENST00000355500 NEXMIFQ5QGS0 1516 aa10.8□□□□□ -0.68
COMMD9-202ENST00000355500 CHRM1P11229 460 aaPredicted RBP10.8□□□□□ -0.68
COMMD9-202ENST00000355500 HDGFP51858 240 aaKnown RBP10.8□□□□□ -0.68
COMMD9-202ENST00000355500 SMG6Q86US8 1419 aaKnown RBP10.8□□□□□ -0.68
COMMD9-202ENST00000355500 XRN1Q8IZH2 1706 aaKnown RBP10.8□□□□□ -0.68
COMMD9-202ENST00000355500 NBR1Q14596 966 aa10.8□□□□□ -0.68
COMMD9-202ENST00000355500 FBXO31Q5XUX0 539 aaPredicted RBP10.79□□□□□ -0.68
COMMD9-202ENST00000355500 MRS2Q9HD23 443 aa10.79□□□□□ -0.68
COMMD9-202ENST00000355500 KCNG1Q9UIX4 513 aa10.79□□□□□ -0.68
COMMD9-202ENST00000355500 EID1Q9Y6B2 187 aa10.79□□□□□ -0.68
COMMD9-202ENST00000355500 KCNA6P17658 529 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms