RNA–Protein interactions for RNA: ENST00000355327.7

THSD4-202, Transcript of thrombospondin type 1 domain containing 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene THSD4, Length 9,200 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THSD4-202ENST00000355327 TSPY26PQ9H489 355 aa16.74■□□□□ 0.27
THSD4-202ENST00000355327 SMC1AQ14683 1233 aaKnown RBP16.74■□□□□ 0.27
THSD4-202ENST00000355327 CENPQQ7L2Z9 268 aaPredicted RBP16.74■□□□□ 0.27
THSD4-202ENST00000355327 PSMD1Q99460 953 aa16.74■□□□□ 0.27
THSD4-202ENST00000355327 GIGYF2Q6Y7W6 1299 aaKnown RBP16.74■□□□□ 0.27
THSD4-202ENST00000355327 MIPOL1Q8TD10 442 aa16.73■□□□□ 0.27
THSD4-202ENST00000355327 LRRFIP2Q9Y608 721 aaKnown RBP16.73■□□□□ 0.27
THSD4-202ENST00000355327 REC8O95072 547 aa16.73■□□□□ 0.27
THSD4-202ENST00000355327 RTF1Q92541 710 aaKnown RBP16.73■□□□□ 0.27
THSD4-202ENST00000355327 CEP83Q9Y592 693 aa16.73■□□□□ 0.27
THSD4-202ENST00000355327 LIG1P18858 919 aa16.73■□□□□ 0.27
THSD4-202ENST00000355327 ZMAT2Q96NC0 199 aaKnown RBP16.73■□□□□ 0.27
THSD4-202ENST00000355327 CPLX2Q6PUV4 134 aaKnown RBP16.71■□□□□ 0.26
THSD4-202ENST00000355327 SYNE3Q6ZMZ3 975 aa16.7■□□□□ 0.26
THSD4-202ENST00000355327 CCDC43Q96MW1 224 aaKnown RBP16.7■□□□□ 0.26
THSD4-202ENST00000355327 HDAC5Q9UQL6 1122 aa16.7■□□□□ 0.26
THSD4-202ENST00000355327 GTF2F1P35269 517 aaKnown RBP eCLIP16.7■□□□□ 0.26
THSD4-202ENST00000355327 PLEKHD1A6NEE1 506 aa16.7■□□□□ 0.26
THSD4-202ENST00000355327 DDX46Q7L014 1031 aaKnown RBP16.69■□□□□ 0.26
THSD4-202ENST00000355327 KIF7Q2M1P5 1343 aa16.69■□□□□ 0.26
THSD4-202ENST00000355327 TXLNAP40222 546 aa16.69■□□□□ 0.26
THSD4-202ENST00000355327 SRPK2P78362 688 aaKnown RBP16.69■□□□□ 0.26
THSD4-202ENST00000355327 KTN1Q86UP2 1357 aaKnown RBP16.69■□□□□ 0.26
THSD4-202ENST00000355327 MCM3P25205 808 aa16.68■□□□□ 0.26
THSD4-202ENST00000355327 SENP3Q9H4L4 574 aaPredicted RBP16.68■□□□□ 0.26
THSD4-202ENST00000355327 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.68■□□□□ 0.26
THSD4-202ENST00000355327 V9GYY5 206 aaPredicted RBP16.68■□□□□ 0.26
THSD4-202ENST00000355327 ZFP91Q96JP5 570 aaPredicted RBP16.68■□□□□ 0.26
THSD4-202ENST00000355327 VPS37CA5D8V6 355 aaPredicted RBP16.68■□□□□ 0.26
THSD4-202ENST00000355327 GOLGA6L9A6NEM1 432 aa16.68■□□□□ 0.26
THSD4-202ENST00000355327 ZFYP08048 801 aaPredicted RBP16.68■□□□□ 0.26
THSD4-202ENST00000355327 SYCP1Q15431 976 aa16.68■□□□□ 0.26
THSD4-202ENST00000355327 GBP3Q9H0R5 595 aa16.68■□□□□ 0.26
THSD4-202ENST00000355327 CPLX1O14810 134 aa16.68■□□□□ 0.26
THSD4-202ENST00000355327 FILIP1LQ4L180 1135 aa16.68■□□□□ 0.26
THSD4-202ENST00000355327 ANKRD18BA2A2Z9 1011 aa16.67■□□□□ 0.26
THSD4-202ENST00000355327 C6orf163Q5TEZ5 329 aa16.67■□□□□ 0.26
THSD4-202ENST00000355327 TRAK2O60296 914 aa16.67■□□□□ 0.26
THSD4-202ENST00000355327 UBXN4Q92575 508 aa16.67■□□□□ 0.26
THSD4-202ENST00000355327 PUS7Q96PZ0 661 aaKnown RBP16.67■□□□□ 0.26
THSD4-202ENST00000355327 NOL10Q9BSC4 688 aaKnown RBP16.67■□□□□ 0.26
THSD4-202ENST00000355327 SMC4Q9NTJ3 1288 aa16.67■□□□□ 0.26
THSD4-202ENST00000355327 FLIIQ13045 1269 aa16.67■□□□□ 0.26
THSD4-202ENST00000355327 ESPNB1AK53 854 aa16.67■□□□□ 0.26
THSD4-202ENST00000355327 KINO60870 393 aaKnown RBP16.66■□□□□ 0.26
THSD4-202ENST00000355327 RILPL2Q969X0 211 aa16.66■□□□□ 0.26
THSD4-202ENST00000355327 FAM177A1Q8N128 213 aaPredicted RBP16.66■□□□□ 0.26
THSD4-202ENST00000355327 SDF4Q9BRK5 362 aa16.66■□□□□ 0.26
THSD4-202ENST00000355327 BRD2P25440 801 aaKnown RBP16.66■□□□□ 0.26
THSD4-202ENST00000355327 MBD3O95983 291 aa16.66■□□□□ 0.26
THSD4-202ENST00000355327 SPECC1LQ69YQ0 1117 aa16.66■□□□□ 0.26
THSD4-202ENST00000355327 HSPA4P34932 840 aa16.65■□□□□ 0.26
THSD4-202ENST00000355327 NUP133Q8WUM0 1156 aa16.65■□□□□ 0.26
THSD4-202ENST00000355327 EIF3AQ14152 1382 aaKnown RBP16.65■□□□□ 0.26
THSD4-202ENST00000355327 NOL3O60936 208 aaKnown RBP16.65■□□□□ 0.26
THSD4-202ENST00000355327 ZKSCAN1P17029 563 aaPredicted RBP16.65■□□□□ 0.26
THSD4-202ENST00000355327 MAGEC2Q9UBF1 373 aaPredicted RBP16.65■□□□□ 0.26
THSD4-202ENST00000355327 FEZ2Q9UHY8 353 aaPredicted RBP16.65■□□□□ 0.26
THSD4-202ENST00000355327 TTC31Q49AM3 519 aaPredicted RBP16.65■□□□□ 0.26
THSD4-202ENST00000355327 IVLP07476 585 aa16.64■□□□□ 0.25
THSD4-202ENST00000355327 PPP4R3BQ5MIZ7 849 aa16.64■□□□□ 0.25
THSD4-202ENST00000355327 RSRC1Q96IZ7 334 aaKnown RBP16.64■□□□□ 0.25
THSD4-202ENST00000355327 SMC3Q9UQE7 1217 aa16.63■□□□□ 0.25
THSD4-202ENST00000355327 CCDC113Q9H0I3 377 aa16.63■□□□□ 0.25
THSD4-202ENST00000355327 CCDC6Q16204 474 aa16.63■□□□□ 0.25
THSD4-202ENST00000355327 CCDC97Q96F63 343 aaPredicted RBP16.63■□□□□ 0.25
THSD4-202ENST00000355327 GBP6Q6ZN66 633 aa16.62■□□□□ 0.25
THSD4-202ENST00000355327 TSPY4P0CV99 314 aa16.62■□□□□ 0.25
THSD4-202ENST00000355327 TSPY10P0CW01 314 aa16.62■□□□□ 0.25
THSD4-202ENST00000355327 MYO10Q9HD67 2058 aa16.62■□□□□ 0.25
THSD4-202ENST00000355327 CCDC174Q6PII3 467 aa16.62■□□□□ 0.25
THSD4-202ENST00000355327 BRPF1P55201 1214 aaPredicted RBP16.61■□□□□ 0.25
THSD4-202ENST00000355327 UBE4AQ14139 1066 aa16.61■□□□□ 0.25
THSD4-202ENST00000355327 MSL1Q68DK7 614 aa16.61■□□□□ 0.25
THSD4-202ENST00000355327 PPFIBP1Q86W92 1011 aa16.61■□□□□ 0.25
THSD4-202ENST00000355327 LRRFIP1Q32MZ4 808 aaKnown RBP16.61■□□□□ 0.25
THSD4-202ENST00000355327 CEP57Q86XR8 500 aa16.6■□□□□ 0.25
THSD4-202ENST00000355327 NAA25Q14CX7 972 aa16.6■□□□□ 0.25
THSD4-202ENST00000355327 SAFBQ15424 915 aaKnown RBP eCLIP16.6■□□□□ 0.25
THSD4-202ENST00000355327 GCOM1H8Y6P7 765 aaPredicted RBP16.6■□□□□ 0.25
THSD4-202ENST00000355327 MYZAPP0CAP1 466 aa16.6■□□□□ 0.25
THSD4-202ENST00000355327 KIF2AO00139 706 aaPredicted RBP16.6■□□□□ 0.25
THSD4-202ENST00000355327 ANO2Q9NQ90 1003 aa16.6■□□□□ 0.25
THSD4-202ENST00000355327 LMAN1P49257 510 aa16.6■□□□□ 0.25
THSD4-202ENST00000355327 ZBTB17Q13105 803 aa16.59■□□□□ 0.25
THSD4-202ENST00000355327 CENPJQ9HC77 1338 aaPredicted RBP16.59■□□□□ 0.25
THSD4-202ENST00000355327 CCDC192P0DO97 292 aa16.59■□□□□ 0.25
THSD4-202ENST00000355327 CCDC158Q5M9N0 1113 aa16.59■□□□□ 0.25
THSD4-202ENST00000355327 GRPEL1Q9HAV7 217 aa16.59■□□□□ 0.25
THSD4-202ENST00000355327 CEP120Q8N960 986 aa16.59■□□□□ 0.25
THSD4-202ENST00000355327 RUFY2Q8WXA3 655 aa16.59■□□□□ 0.25
THSD4-202ENST00000355327 PIP4K2AP48426 406 aaPredicted RBP16.59■□□□□ 0.25
THSD4-202ENST00000355327 MTUS2Q5JR59 1369 aa16.59■□□□□ 0.25
THSD4-202ENST00000355327 NBPF1Q3BBV0 1214 aa16.59■□□□□ 0.25
THSD4-202ENST00000355327 CCDC148Q8NFR7 591 aa16.59■□□□□ 0.25
THSD4-202ENST00000355327 A0A1B0GUA9 196 aa16.58■□□□□ 0.25
THSD4-202ENST00000355327 RGL3Q3MIN7 710 aa16.58■□□□□ 0.25
THSD4-202ENST00000355327 SERPINC1P01008 464 aa16.58■□□□□ 0.25
THSD4-202ENST00000355327 SPAG9O60271 1321 aaKnown RBP16.58■□□□□ 0.24
THSD4-202ENST00000355327 C10orf67Q8IYJ2 551 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms