RNA–Protein interactions for RNA: ENST00000354757.4

PCDHB11-201, Transcript of protocadherin beta 11, humanhuman

APPRIS P1 BASIC

Gene PCDHB11, Length 4,198 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-201ENST00000354757 BECN1Q14457 450 aa15.6■□□□□ 0.09
PCDHB11-201ENST00000354757 THUMPD2Q9BTF0 503 aaKnown RBP15.6■□□□□ 0.09
PCDHB11-201ENST00000354757 ZC3H6P61129 1189 aaKnown RBP15.6■□□□□ 0.09
PCDHB11-201ENST00000354757 CFAP65Q6ZU64 1925 aaKnown RBP15.59■□□□□ 0.09
PCDHB11-201ENST00000354757 BCAR3O75815 825 aa15.59■□□□□ 0.09
PCDHB11-201ENST00000354757 TSPYL4Q9UJ04 414 aa15.58■□□□□ 0.08
PCDHB11-201ENST00000354757 DUOX2Q9NRD8 1548 aa15.58■□□□□ 0.08
PCDHB11-201ENST00000354757 PZPP20742 1482 aa15.57■□□□□ 0.08
PCDHB11-201ENST00000354757 KCNJ4P48050 445 aa15.57■□□□□ 0.08
PCDHB11-201ENST00000354757 EXOSC9Q06265 439 aaKnown RBP15.57■□□□□ 0.08
PCDHB11-201ENST00000354757 ERICH6BQ5W0A0 696 aa15.57■□□□□ 0.08
PCDHB11-201ENST00000354757 CASC1Q6TDU7 716 aa15.57■□□□□ 0.08
PCDHB11-201ENST00000354757 EMILIN1Q9Y6C2 1016 aa15.57■□□□□ 0.08
PCDHB11-201ENST00000354757 GPRASP1Q5JY77 1395 aa15.57■□□□□ 0.08
PCDHB11-201ENST00000354757 STRN4Q9NRL3 753 aa15.57■□□□□ 0.08
PCDHB11-201ENST00000354757 RAPGEF4Q8WZA2 1011 aa15.57■□□□□ 0.08
PCDHB11-201ENST00000354757 DDRGK1Q96HY6 314 aa15.56■□□□□ 0.08
PCDHB11-201ENST00000354757 NCKAP5LQ9HCH0 1330 aa15.56■□□□□ 0.08
PCDHB11-201ENST00000354757 ATAD2Q6PL18 1390 aa15.55■□□□□ 0.08
PCDHB11-201ENST00000354757 FKBP5Q13451 457 aaPredicted RBP15.55■□□□□ 0.08
PCDHB11-201ENST00000354757 MFAP1P55081 439 aaKnown RBP15.54■□□□□ 0.08
PCDHB11-201ENST00000354757 ABCC10Q5T3U5 1492 aa15.54■□□□□ 0.08
PCDHB11-201ENST00000354757 AEBP2Q6ZN18 517 aaPredicted RBP15.54■□□□□ 0.08
PCDHB11-201ENST00000354757 ZNF692Q9BU19 519 aaPredicted RBP15.54■□□□□ 0.08
PCDHB11-201ENST00000354757 WASLO00401 505 aaPredicted RBP15.54■□□□□ 0.08
PCDHB11-201ENST00000354757 DZIP1LQ8IYY4 767 aaKnown RBP15.54■□□□□ 0.08
PCDHB11-201ENST00000354757 DCTN1Q14203 1278 aa15.54■□□□□ 0.08
PCDHB11-201ENST00000354757 IPO9Q96P70 1041 aaKnown RBP15.54■□□□□ 0.08
PCDHB11-201ENST00000354757 HSPA2P54652 639 aa15.53■□□□□ 0.08
PCDHB11-201ENST00000354757 TESK2Q96S53 571 aa15.53■□□□□ 0.08
PCDHB11-201ENST00000354757 ANKRD45Q5TZF3 282 aa15.53■□□□□ 0.08
PCDHB11-201ENST00000354757 AIMP1Q12904 312 aaKnown RBP15.52■□□□□ 0.08
PCDHB11-201ENST00000354757 TNRQ92752 1358 aa15.52■□□□□ 0.07
PCDHB11-201ENST00000354757 NAP1L2Q9ULW6 460 aaPredicted RBP15.52■□□□□ 0.07
PCDHB11-201ENST00000354757 SCAF11Q99590 1463 aaKnown RBP15.52■□□□□ 0.07
PCDHB11-201ENST00000354757 DNMT1P26358 1616 aaKnown RBP15.51■□□□□ 0.07
PCDHB11-201ENST00000354757 PRAG1Q86YV5 1406 aa15.51■□□□□ 0.07
PCDHB11-201ENST00000354757 GNAI1P63096 354 aa15.51■□□□□ 0.07
PCDHB11-201ENST00000354757 USHBP1Q8N6Y0 703 aa15.51■□□□□ 0.07
PCDHB11-201ENST00000354757 TTC5Q8N0Z6 440 aa15.51■□□□□ 0.07
PCDHB11-201ENST00000354757 SLKQ9H2G2 1235 aaPredicted RBP15.51■□□□□ 0.07
PCDHB11-201ENST00000354757 MIS18AQ9NYP9 233 aa15.51■□□□□ 0.07
PCDHB11-201ENST00000354757 TRIM6-TRIM34B2RNG4 842 aa15.5■□□□□ 0.07
PCDHB11-201ENST00000354757 ZRANB1Q9UGI0 708 aa15.5■□□□□ 0.07
PCDHB11-201ENST00000354757 NCLP19338 710 aaKnown RBP15.5■□□□□ 0.07
PCDHB11-201ENST00000354757 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.5■□□□□ 0.07
PCDHB11-201ENST00000354757 NUTM2BA6NNL0 878 aaPredicted RBP15.5■□□□□ 0.07
PCDHB11-201ENST00000354757 NUTM2EB1AL46 878 aaPredicted RBP15.5■□□□□ 0.07
PCDHB11-201ENST00000354757 PIP4K2BP78356 416 aa15.5■□□□□ 0.07
PCDHB11-201ENST00000354757 NUTM2AQ8IVF1 878 aaPredicted RBP15.5■□□□□ 0.07
PCDHB11-201ENST00000354757 FGD1P98174 961 aa15.49■□□□□ 0.07
PCDHB11-201ENST00000354757 CHD1O14646 1710 aa15.48■□□□□ 0.07
PCDHB11-201ENST00000354757 HSP90AB1P08238 724 aaKnown RBP15.48■□□□□ 0.07
PCDHB11-201ENST00000354757 SLC4A3P48751 1232 aa15.48■□□□□ 0.07
PCDHB11-201ENST00000354757 MBD5Q9P267 1494 aa15.47■□□□□ 0.07
PCDHB11-201ENST00000354757 C1orf115Q9H7X2 142 aa15.47■□□□□ 0.07
PCDHB11-201ENST00000354757 YEATS2Q9ULM3 1422 aa15.47■□□□□ 0.07
PCDHB11-201ENST00000354757 ZMYM3Q14202 1370 aa15.47■□□□□ 0.07
PCDHB11-201ENST00000354757 TEX14Q8IWB6 1497 aa15.47■□□□□ 0.07
PCDHB11-201ENST00000354757 IL27Q8NEV9 243 aa15.46■□□□□ 0.07
PCDHB11-201ENST00000354757 PRDM11Q9NQV5 511 aa15.46■□□□□ 0.07
PCDHB11-201ENST00000354757 ABCA8O94911 1581 aa15.46■□□□□ 0.07
PCDHB11-201ENST00000354757 HMMRO75330 724 aa15.46■□□□□ 0.07
PCDHB11-201ENST00000354757 WWC1Q8IX03 1113 aa15.46■□□□□ 0.07
PCDHB11-201ENST00000354757 LNPKQ9C0E8 428 aa15.46■□□□□ 0.07
PCDHB11-201ENST00000354757 KDM6BO15054 1643 aa15.46■□□□□ 0.07
PCDHB11-201ENST00000354757 MCM10Q7L590 875 aa15.46■□□□□ 0.07
PCDHB11-201ENST00000354757 DDX54Q8TDD1 881 aaKnown RBP15.46■□□□□ 0.07
PCDHB11-201ENST00000354757 PHF8Q9UPP1 1060 aa15.46■□□□□ 0.07
PCDHB11-201ENST00000354757 SHANK2Q9UPX8 1470 aa15.46■□□□□ 0.06
PCDHB11-201ENST00000354757 TAF7LQ5H9L4 462 aa15.46■□□□□ 0.06
PCDHB11-201ENST00000354757 TWISTNBQ3B726 338 aaPredicted RBP15.45■□□□□ 0.06
PCDHB11-201ENST00000354757 TMPOP42166 694 aaKnown RBP15.45■□□□□ 0.06
PCDHB11-201ENST00000354757 CENPQQ7L2Z9 268 aaPredicted RBP15.45■□□□□ 0.06
PCDHB11-201ENST00000354757 UHRF1BP1LA0JNW5 1464 aa15.45■□□□□ 0.06
PCDHB11-201ENST00000354757 NOL8Q76FK4 1167 aaKnown RBP15.45■□□□□ 0.06
PCDHB11-201ENST00000354757 SKAP1Q86WV1 359 aa15.45■□□□□ 0.06
PCDHB11-201ENST00000354757 C9orf78Q9NZ63 289 aaPredicted RBP15.45■□□□□ 0.06
PCDHB11-201ENST00000354757 ACEP12821 1306 aa15.45■□□□□ 0.06
PCDHB11-201ENST00000354757 AMER1Q5JTC6 1135 aaPredicted RBP15.44■□□□□ 0.06
PCDHB11-201ENST00000354757 ZNF530Q6P9A1 599 aaPredicted RBP15.44■□□□□ 0.06
PCDHB11-201ENST00000354757 PDE4AP27815 886 aa15.44■□□□□ 0.06
PCDHB11-201ENST00000354757 GTF2E1P29083 439 aaPredicted RBP15.44■□□□□ 0.06
PCDHB11-201ENST00000354757 CARD14Q9BXL6 1004 aa15.44■□□□□ 0.06
PCDHB11-201ENST00000354757 DDX19BQ9UMR2 479 aa15.44■□□□□ 0.06
PCDHB11-201ENST00000354757 PPP6R1Q9UPN7 881 aa15.44■□□□□ 0.06
PCDHB11-201ENST00000354757 ATP7AQ04656 1500 aa15.44■□□□□ 0.06
PCDHB11-201ENST00000354757 TOM1L2Q6ZVM7 507 aa15.43■□□□□ 0.06
PCDHB11-201ENST00000354757 FOXD4L1Q9NU39 408 aa15.43■□□□□ 0.06
PCDHB11-201ENST00000354757 FYB1O15117 783 aa15.43■□□□□ 0.06
PCDHB11-201ENST00000354757 GORABQ5T7V8 394 aa15.43■□□□□ 0.06
PCDHB11-201ENST00000354757 RALGAPBQ86X10 1494 aa15.42■□□□□ 0.06
PCDHB11-201ENST00000354757 C20orf194Q5TEA3 1177 aa15.42■□□□□ 0.06
PCDHB11-201ENST00000354757 RILPL2Q969X0 211 aa15.42■□□□□ 0.06
PCDHB11-201ENST00000354757 RIMS2Q9UQ26 1411 aa15.41■□□□□ 0.06
PCDHB11-201ENST00000354757 KCNA6P17658 529 aa15.41■□□□□ 0.06
PCDHB11-201ENST00000354757 API5Q9BZZ5 524 aaKnown RBP15.41■□□□□ 0.06
PCDHB11-201ENST00000354757 ADGRL2O95490 1459 aa15.41■□□□□ 0.06
PCDHB11-201ENST00000354757 HSCBQ8IWL3 235 aa15.41■□□□□ 0.06
PCDHB11-201ENST00000354757 NOB1Q9ULX3 412 aaKnown RBP15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms