RNA–Protein interactions for RNA: ENST00000354559.9

SDHAP1-201, Transcript of succinate dehydrogenase complex flavoprotein subunit A pseudogene 1, humanhuman

TSL 3

Gene SDHAP1, Length 615 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAP1-201ENST00000354559 CPS1P31327 1500 aa18.39■□□□□ 0.54
SDHAP1-201ENST00000354559 PTCH1Q13635 1447 aa18.39■□□□□ 0.53
SDHAP1-201ENST00000354559 XRN1Q8IZH2 1706 aaKnown RBP18.38■□□□□ 0.53
SDHAP1-201ENST00000354559 DDX10Q13206 875 aaKnown RBP18.38■□□□□ 0.53
SDHAP1-201ENST00000354559 DMRT2Q9Y5R5 561 aa18.38■□□□□ 0.53
SDHAP1-201ENST00000354559 CDCA8Q53HL2 280 aa18.37■□□□□ 0.53
SDHAP1-201ENST00000354559 KNDC1Q76NI1 1749 aa18.36■□□□□ 0.53
SDHAP1-201ENST00000354559 PROSER2Q86WR7 435 aaPredicted RBP18.36■□□□□ 0.53
SDHAP1-201ENST00000354559 ZNF335Q9H4Z2 1342 aaPredicted RBP18.35■□□□□ 0.53
SDHAP1-201ENST00000354559 CDK19Q9BWU1 502 aa18.35■□□□□ 0.53
SDHAP1-201ENST00000354559 EVC2Q86UK5 1308 aa18.34■□□□□ 0.53
SDHAP1-201ENST00000354559 CABP2Q9NPB3 220 aa18.34■□□□□ 0.53
SDHAP1-201ENST00000354559 CHD2O14647 1828 aaKnown RBP18.34■□□□□ 0.53
SDHAP1-201ENST00000354559 QRICH2Q9H0J4 1663 aa18.34■□□□□ 0.53
SDHAP1-201ENST00000354559 NWD1Q149M9 1564 aa18.34■□□□□ 0.53
SDHAP1-201ENST00000354559 TULP4Q9NRJ4 1543 aa18.33■□□□□ 0.53
SDHAP1-201ENST00000354559 WASLO00401 505 aaPredicted RBP18.32■□□□□ 0.52
SDHAP1-201ENST00000354559 PUS7Q96PZ0 661 aaKnown RBP18.32■□□□□ 0.52
SDHAP1-201ENST00000354559 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.3■□□□□ 0.52
SDHAP1-201ENST00000354559 SRPK2P78362 688 aaKnown RBP18.3■□□□□ 0.52
SDHAP1-201ENST00000354559 NKTRP30414 1462 aaKnown RBP18.29■□□□□ 0.52
SDHAP1-201ENST00000354559 TMEM94Q12767 1356 aa18.29■□□□□ 0.52
SDHAP1-201ENST00000354559 STRCP1A6NGW2 1772 aa18.27■□□□□ 0.52
SDHAP1-201ENST00000354559 ANP32CO43423 234 aa18.27■□□□□ 0.52
SDHAP1-201ENST00000354559 PRR36Q9H6K5 1346 aa18.26■□□□□ 0.51
SDHAP1-201ENST00000354559 NUTM2FA1L443 756 aa18.26■□□□□ 0.51
SDHAP1-201ENST00000354559 C14orf37Q86TY3 774 aa18.26■□□□□ 0.51
SDHAP1-201ENST00000354559 YTHDC1Q96MU7 727 aaKnown RBP18.26■□□□□ 0.51
SDHAP1-201ENST00000354559 SLC12A5Q9H2X9 1139 aa18.26■□□□□ 0.51
SDHAP1-201ENST00000354559 NUDT16Q96DE0 195 aaKnown RBP18.25■□□□□ 0.51
SDHAP1-201ENST00000354559 ADGRL3Q9HAR2 1447 aa18.24■□□□□ 0.51
SDHAP1-201ENST00000354559 TMC1Q8TDI8 760 aa18.24■□□□□ 0.51
SDHAP1-201ENST00000354559 LRRC7Q96NW7 1537 aa18.23■□□□□ 0.51
SDHAP1-201ENST00000354559 PANK3Q9H999 370 aa18.23■□□□□ 0.51
SDHAP1-201ENST00000354559 ADGRB2O60241 1585 aa18.22■□□□□ 0.51
SDHAP1-201ENST00000354559 C19orf44Q9H6X5 657 aa18.22■□□□□ 0.51
SDHAP1-201ENST00000354559 CABP1Q9NZU7 370 aa18.22■□□□□ 0.51
SDHAP1-201ENST00000354559 ATAD2Q6PL18 1390 aa18.21■□□□□ 0.51
SDHAP1-201ENST00000354559 NCOA3Q9Y6Q9 1424 aa18.21■□□□□ 0.51
SDHAP1-201ENST00000354559 CCDC61Q9Y6R9 512 aa18.2■□□□□ 0.5
SDHAP1-201ENST00000354559 CCER2I3L3R5 266 aa18.19■□□□□ 0.5
SDHAP1-201ENST00000354559 CARD14Q9BXL6 1004 aa18.19■□□□□ 0.5
SDHAP1-201ENST00000354559 PER1O15534 1290 aaPredicted RBP18.18■□□□□ 0.5
SDHAP1-201ENST00000354559 ATP7BP35670 1465 aa18.18■□□□□ 0.5
SDHAP1-201ENST00000354559 NALCNQ8IZF0 1738 aa18.18■□□□□ 0.5
SDHAP1-201ENST00000354559 ILDR1Q86SU0 546 aaPredicted RBP18.17■□□□□ 0.5
SDHAP1-201ENST00000354559 LTBP4Q8N2S1 1624 aa18.16■□□□□ 0.5
SDHAP1-201ENST00000354559 CDC42BPGQ6DT37 1551 aa18.16■□□□□ 0.5
SDHAP1-201ENST00000354559 PPIP5K1Q6PFW1 1433 aa18.15■□□□□ 0.5
SDHAP1-201ENST00000354559 PLEKHG3A1L390 1219 aa18.15■□□□□ 0.5
SDHAP1-201ENST00000354559 ATF3P18847 181 aa18.15■□□□□ 0.5
SDHAP1-201ENST00000354559 MSH6P52701 1360 aa18.15■□□□□ 0.5
SDHAP1-201ENST00000354559 NINLQ9Y2I6 1382 aa18.15■□□□□ 0.5
SDHAP1-201ENST00000354559 ANKARQ7Z5J8 1434 aa18.15■□□□□ 0.5
SDHAP1-201ENST00000354559 PMFBP1Q8TBY8 1022 aa18.14■□□□□ 0.49
SDHAP1-201ENST00000354559 CD163L1Q9NR16 1453 aa18.14■□□□□ 0.49
SDHAP1-201ENST00000354559 MYOM1P52179 1685 aa18.13■□□□□ 0.49
SDHAP1-201ENST00000354559 USP32Q8NFA0 1604 aa18.12■□□□□ 0.49
SDHAP1-201ENST00000354559 CADPS2Q86UW7 1296 aa18.12■□□□□ 0.49
SDHAP1-201ENST00000354559 ORAI2Q96SN7 254 aa18.12■□□□□ 0.49
SDHAP1-201ENST00000354559 TERF2IPQ9NYB0 399 aa18.12■□□□□ 0.49
SDHAP1-201ENST00000354559 ANKRD36BQ8N2N9 1353 aa18.12■□□□□ 0.49
SDHAP1-201ENST00000354559 ACEP12821 1306 aa18.11■□□□□ 0.49
SDHAP1-201ENST00000354559 A0A1W2PP64 1363 aa18.11■□□□□ 0.49
SDHAP1-201ENST00000354559 FMN2Q9NZ56 1722 aa18.11■□□□□ 0.49
SDHAP1-201ENST00000354559 C1orf167Q5SNV9 1468 aa18.1■□□□□ 0.49
SDHAP1-201ENST00000354559 DCCP43146 1447 aa18.1■□□□□ 0.49
SDHAP1-201ENST00000354559 MST1RQ04912 1400 aa18.1■□□□□ 0.49
SDHAP1-201ENST00000354559 CNGB1Q14028 1251 aaPredicted RBP18.1■□□□□ 0.49
SDHAP1-201ENST00000354559 ESCO1Q5FWF5 840 aa18.1■□□□□ 0.49
SDHAP1-201ENST00000354559 HDGFL2Q7Z4V5 671 aaPredicted RBP18.1■□□□□ 0.49
SDHAP1-201ENST00000354559 PHF8Q9UPP1 1060 aa18.1■□□□□ 0.49
SDHAP1-201ENST00000354559 XIRP1Q702N8 1843 aaKnown RBP18.09■□□□□ 0.49
SDHAP1-201ENST00000354559 CPSF1Q10570 1443 aaKnown RBP18.09■□□□□ 0.49
SDHAP1-201ENST00000354559 AMER1Q5JTC6 1135 aaPredicted RBP18.09■□□□□ 0.49
SDHAP1-201ENST00000354559 KNSTRNQ9Y448 316 aa18.09■□□□□ 0.49
SDHAP1-201ENST00000354559 NSD3Q9BZ95 1437 aa18.08■□□□□ 0.49
SDHAP1-201ENST00000354559 NGDNQ8NEJ9 315 aaKnown RBP18.08■□□□□ 0.48
SDHAP1-201ENST00000354559 PRKRIP1Q9H875 184 aaPredicted RBP18.07■□□□□ 0.48
SDHAP1-201ENST00000354559 KTN1Q86UP2 1357 aaKnown RBP18.06■□□□□ 0.48
SDHAP1-201ENST00000354559 ZNF692Q9BU19 519 aaPredicted RBP18.06■□□□□ 0.48
SDHAP1-201ENST00000354559 SLAIN2Q9P270 581 aa18.06■□□□□ 0.48
SDHAP1-201ENST00000354559 POLR3AO14802 1390 aaPredicted RBP18.05■□□□□ 0.48
SDHAP1-201ENST00000354559 CC2D1BQ5T0F9 858 aaKnown RBP18.05■□□□□ 0.48
SDHAP1-201ENST00000354559 TOPAZ1Q8N9V7 1692 aa18.05■□□□□ 0.48
SDHAP1-201ENST00000354559 NPC1L1Q9UHC9 1359 aa18.04■□□□□ 0.48
SDHAP1-201ENST00000354559 FOXO3O43524 673 aa18.03■□□□□ 0.48
SDHAP1-201ENST00000354559 RALBP1Q15311 655 aa18.03■□□□□ 0.48
SDHAP1-201ENST00000354559 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.03■□□□□ 0.48
SDHAP1-201ENST00000354559 BRINP3Q76B58 766 aa18.02■□□□□ 0.48
SDHAP1-201ENST00000354559 DDX17Q92841 729 aaKnown RBP18.02■□□□□ 0.48
SDHAP1-201ENST00000354559 TTC21BQ7Z4L5 1316 aa18.01■□□□□ 0.47
SDHAP1-201ENST00000354559 USP6P35125 1406 aa18.01■□□□□ 0.47
SDHAP1-201ENST00000354559 SSH2Q76I76 1423 aa18.01■□□□□ 0.47
SDHAP1-201ENST00000354559 FYB1O15117 783 aa18.01■□□□□ 0.47
SDHAP1-201ENST00000354559 ZRANB1Q9UGI0 708 aa18.01■□□□□ 0.47
SDHAP1-201ENST00000354559 RGPD8O14715 1765 aaPredicted RBP18.01■□□□□ 0.47
SDHAP1-201ENST00000354559 SCAF1Q9H7N4 1312 aaKnown RBP18■□□□□ 0.47
SDHAP1-201ENST00000354559 XPCQ01831 940 aaPredicted RBP18■□□□□ 0.47
SDHAP1-201ENST00000354559 PSME1Q06323 249 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms