RNA–Protein interactions for RNA: ENST00000354325.2

TRERF1-202, Transcript of transcriptional regulating factor 1, humanhuman

TSL 5 BASIC

Gene TRERF1, Length 4,138 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-202ENST00000354325 WWC1Q8IX03 1113 aa15.34■□□□□ 0.05
TRERF1-202ENST00000354325 MAGI1Q96QZ7 1491 aaPredicted RBP15.34■□□□□ 0.05
TRERF1-202ENST00000354325 RARSP54136 660 aaKnown RBP15.34■□□□□ 0.05
TRERF1-202ENST00000354325 NCBP3Q53F19 620 aaKnown RBP15.34■□□□□ 0.05
TRERF1-202ENST00000354325 DZIP1LQ8IYY4 767 aaKnown RBP15.34■□□□□ 0.05
TRERF1-202ENST00000354325 TARBP1Q13395 1621 aaKnown RBP15.34■□□□□ 0.05
TRERF1-202ENST00000354325 PLXNC1O60486 1568 aa15.34■□□□□ 0.05
TRERF1-202ENST00000354325 KIF16BQ96L93 1317 aa15.34■□□□□ 0.05
TRERF1-202ENST00000354325 STAG3Q9UJ98 1225 aa15.33■□□□□ 0.05
TRERF1-202ENST00000354325 MVPQ14764 893 aaKnown RBP15.33■□□□□ 0.04
TRERF1-202ENST00000354325 SCAF11Q99590 1463 aaKnown RBP15.33■□□□□ 0.04
TRERF1-202ENST00000354325 MORC1Q86VD1 984 aa15.32■□□□□ 0.04
TRERF1-202ENST00000354325 SMC5Q8IY18 1101 aa15.32■□□□□ 0.04
TRERF1-202ENST00000354325 IFT140Q96RY7 1462 aa15.31■□□□□ 0.04
TRERF1-202ENST00000354325 OFD1O75665 1012 aa15.31■□□□□ 0.04
TRERF1-202ENST00000354325 SYNJ2O15056 1496 aa15.31■□□□□ 0.04
TRERF1-202ENST00000354325 POLR3AO14802 1390 aaPredicted RBP15.31■□□□□ 0.04
TRERF1-202ENST00000354325 DDX49Q9Y6V7 483 aaKnown RBP15.3■□□□□ 0.04
TRERF1-202ENST00000354325 WDR7Q9Y4E6 1490 aa15.3■□□□□ 0.04
TRERF1-202ENST00000354325 MCM5P33992 734 aa15.3■□□□□ 0.04
TRERF1-202ENST00000354325 NUCB2P80303 420 aa15.29■□□□□ 0.04
TRERF1-202ENST00000354325 NEUROD2Q15784 382 aa15.29■□□□□ 0.04
TRERF1-202ENST00000354325 HDAC1Q13547 482 aaPredicted RBP15.29■□□□□ 0.04
TRERF1-202ENST00000354325 ESF1Q9H501 851 aaKnown RBP15.29■□□□□ 0.04
TRERF1-202ENST00000354325 ABCC10Q5T3U5 1492 aa15.29■□□□□ 0.04
TRERF1-202ENST00000354325 CCDC27Q2M243 656 aa15.28■□□□□ 0.04
TRERF1-202ENST00000354325 TNPO1Q92973 898 aaKnown RBP15.28■□□□□ 0.04
TRERF1-202ENST00000354325 NLRP1Q9C000 1473 aa15.28■□□□□ 0.04
TRERF1-202ENST00000354325 PPP1R9BQ96SB3 815 aa15.28■□□□□ 0.04
TRERF1-202ENST00000354325 PCDHB15Q9Y5E8 787 aa15.28■□□□□ 0.04
TRERF1-202ENST00000354325 MAGI2Q86UL8 1455 aa15.28■□□□□ 0.04
TRERF1-202ENST00000354325 IBTKQ9P2D0 1353 aaPredicted RBP15.28■□□□□ 0.04
TRERF1-202ENST00000354325 RAB3GAP1Q15042 981 aa15.27■□□□□ 0.04
TRERF1-202ENST00000354325 GRIN2AQ12879 1464 aa15.27■□□□□ 0.03
TRERF1-202ENST00000354325 PLB1Q6P1J6 1458 aa15.27■□□□□ 0.03
TRERF1-202ENST00000354325 RBM25P49756 843 aaKnown RBP15.27■□□□□ 0.03
TRERF1-202ENST00000354325 SMC4Q9NTJ3 1288 aa15.27■□□□□ 0.03
TRERF1-202ENST00000354325 ATP10AO60312 1499 aa15.26■□□□□ 0.03
TRERF1-202ENST00000354325 ITPRIPQ8IWB1 547 aa15.26■□□□□ 0.03
TRERF1-202ENST00000354325 KLHL40Q2TBA0 621 aa15.26■□□□□ 0.03
TRERF1-202ENST00000354325 SPINK5Q9NQ38 1064 aaPredicted RBP15.26■□□□□ 0.03
TRERF1-202ENST00000354325 K7ELQ4 463 aaPredicted RBP15.25■□□□□ 0.03
TRERF1-202ENST00000354325 TCP11L2Q8N4U5 519 aa15.25■□□□□ 0.03
TRERF1-202ENST00000354325 MRC2Q9UBG0 1479 aa15.25■□□□□ 0.03
TRERF1-202ENST00000354325 CCDC39Q9UFE4 941 aa15.24■□□□□ 0.03
TRERF1-202ENST00000354325 CASC1Q6TDU7 716 aa15.24■□□□□ 0.03
TRERF1-202ENST00000354325 DYNC1I1O14576 645 aa15.23■□□□□ 0.03
TRERF1-202ENST00000354325 FAM13BQ9NYF5 915 aa15.23■□□□□ 0.03
TRERF1-202ENST00000354325 PTMAP06454 111 aaKnown RBP15.22■□□□□ 0.03
TRERF1-202ENST00000354325 CDC42BPAQ5VT25 1732 aa15.22■□□□□ 0.03
TRERF1-202ENST00000354325 KANK1Q14678 1352 aa15.22■□□□□ 0.03
TRERF1-202ENST00000354325 R3HCC1Q9Y3T6 440 aaKnown RBP15.22■□□□□ 0.03
TRERF1-202ENST00000354325 SYAP1Q96A49 352 aaPredicted RBP15.21■□□□□ 0.03
TRERF1-202ENST00000354325 CWC22Q9HCG8 908 aaKnown RBP15.21■□□□□ 0.02
TRERF1-202ENST00000354325 UNC13BO14795 1591 aa15.2■□□□□ 0.02
TRERF1-202ENST00000354325 SMAP1Q8IYB5 467 aaPredicted RBP15.2■□□□□ 0.02
TRERF1-202ENST00000354325 BCL2L13Q9BXK5 485 aa15.2■□□□□ 0.02
TRERF1-202ENST00000354325 GCC1Q96CN9 775 aa15.2■□□□□ 0.02
TRERF1-202ENST00000354325 DUOX2Q9NRD8 1548 aa15.2■□□□□ 0.02
TRERF1-202ENST00000354325 BMP2KLQ5H9B9 411 aa15.19■□□□□ 0.02
TRERF1-202ENST00000354325 GGT6Q6P531 493 aa15.19■□□□□ 0.02
TRERF1-202ENST00000354325 RABEP1Q15276 862 aa15.19■□□□□ 0.02
TRERF1-202ENST00000354325 PODXL2Q9NZ53 605 aa15.19■□□□□ 0.02
TRERF1-202ENST00000354325 NCOA3Q9Y6Q9 1424 aa15.19■□□□□ 0.02
TRERF1-202ENST00000354325 EFCAB2Q5VUJ9 269 aa15.19■□□□□ 0.02
TRERF1-202ENST00000354325 ATF7IPQ6VMQ6 1270 aa15.19■□□□□ 0.02
TRERF1-202ENST00000354325 KDM5AP29375 1690 aaKnown RBP15.18■□□□□ 0.02
TRERF1-202ENST00000354325 ZNF445P59923 1031 aa15.18■□□□□ 0.02
TRERF1-202ENST00000354325 RRP7AQ9Y3A4 280 aaKnown RBP15.18■□□□□ 0.02
TRERF1-202ENST00000354325 UQCRHLA0A096LP55 91 aa15.18■□□□□ 0.02
TRERF1-202ENST00000354325 UQCRHP07919 91 aa15.18■□□□□ 0.02
TRERF1-202ENST00000354325 HMGN5P82970 282 aaKnown RBP15.18■□□□□ 0.02
TRERF1-202ENST00000354325 PLA2R1Q13018 1463 aa15.18■□□□□ 0.02
TRERF1-202ENST00000354325 RNF17Q9BXT8 1623 aaKnown RBP15.17■□□□□ 0.02
TRERF1-202ENST00000354325 KIAA2012Q0VF49 1180 aa15.17■□□□□ 0.02
TRERF1-202ENST00000354325 DNTTIP2Q5QJE6 756 aaKnown RBP15.17■□□□□ 0.02
TRERF1-202ENST00000354325 SASS6Q6UVJ0 657 aa15.17■□□□□ 0.02
TRERF1-202ENST00000354325 ZNF428Q96B54 188 aa15.17■□□□□ 0.02
TRERF1-202ENST00000354325 NOL7Q9UMY1 257 aaKnown RBP15.17■□□□□ 0.02
TRERF1-202ENST00000354325 ZNF500O60304 480 aaPredicted RBP15.17■□□□□ 0.02
TRERF1-202ENST00000354325 PHF14O94880 888 aa15.17■□□□□ 0.02
TRERF1-202ENST00000354325 U2AF1L5P0DN76 240 aaPredicted RBP15.17■□□□□ 0.02
TRERF1-202ENST00000354325 U2AF1Q01081 240 aaKnown RBP eCLIP15.17■□□□□ 0.02
TRERF1-202ENST00000354325 ST18O60284 1047 aa15.17■□□□□ 0.02
TRERF1-202ENST00000354325 IQGAP3Q86VI3 1631 aa15.16■□□□□ 0.02
TRERF1-202ENST00000354325 MBD3O95983 291 aa15.16■□□□□ 0.02
TRERF1-202ENST00000354325 RLBP1P12271 317 aa15.16■□□□□ 0.02
TRERF1-202ENST00000354325 ABCC11Q96J66 1382 aa15.16■□□□□ 0.02
TRERF1-202ENST00000354325 MAST1Q9Y2H9 1570 aa15.16■□□□□ 0.02
TRERF1-202ENST00000354325 ERBB4Q15303 1308 aa15.16■□□□□ 0.02
TRERF1-202ENST00000354325 ATP10BO94823 1461 aa15.16■□□□□ 0.02
TRERF1-202ENST00000354325 CDC45O75419 566 aa15.16■□□□□ 0.02
TRERF1-202ENST00000354325 CLEC17AQ6ZS10 378 aa15.16■□□□□ 0.02
TRERF1-202ENST00000354325 CHD1LQ86WJ1 897 aa15.16■□□□□ 0.02
TRERF1-202ENST00000354325 ZNF692Q9BU19 519 aaPredicted RBP15.15■□□□□ 0.02
TRERF1-202ENST00000354325 TTC37Q6PGP7 1564 aa15.15■□□□□ 0.02
TRERF1-202ENST00000354325 ARHGAP5Q13017 1502 aa15.15■□□□□ 0.02
TRERF1-202ENST00000354325 NUCB1Q02818 461 aa15.15■□□□□ 0.02
TRERF1-202ENST00000354325 BAG4O95429 457 aaKnown RBP15.14■□□□□ 0.01
TRERF1-202ENST00000354325 MLECQ14165 292 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms