RNA–Protein interactions for RNA: ENST00000353909.7

MBD1-205, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-205ENST00000353909 MORC1Q86VD1 984 aa20.64■□□□□ 0.89
MBD1-205ENST00000353909 PTPRMP28827 1452 aa20.62■□□□□ 0.89
MBD1-205ENST00000353909 PLIN1O60240 522 aa20.62■□□□□ 0.89
MBD1-205ENST00000353909 YTHDC2Q9H6S0 1430 aaKnown RBP20.62■□□□□ 0.89
MBD1-205ENST00000353909 APAF1O14727 1248 aa20.62■□□□□ 0.89
MBD1-205ENST00000353909 PPP6R1Q9UPN7 881 aa20.62■□□□□ 0.89
MBD1-205ENST00000353909 SRPK2P78362 688 aaKnown RBP20.61■□□□□ 0.89
MBD1-205ENST00000353909 CCDC136Q96JN2 1154 aa20.61■□□□□ 0.89
MBD1-205ENST00000353909 EXOC6Q8TAG9 804 aa20.61■□□□□ 0.89
MBD1-205ENST00000353909 ZNF521Q96K83 1311 aa20.61■□□□□ 0.89
MBD1-205ENST00000353909 A2ML1A8K2U0 1454 aa20.61■□□□□ 0.89
MBD1-205ENST00000353909 ARHGEF40Q8TER5 1519 aa20.6■□□□□ 0.89
MBD1-205ENST00000353909 ALKQ9UM73 1620 aa20.6■□□□□ 0.89
MBD1-205ENST00000353909 POGKQ9P215 609 aa20.59■□□□□ 0.89
MBD1-205ENST00000353909 SPATA31D1Q6ZQQ2 1576 aa20.59■□□□□ 0.89
MBD1-205ENST00000353909 ANKRD36BQ8N2N9 1353 aa20.58■□□□□ 0.88
MBD1-205ENST00000353909 CGNL1Q0VF96 1302 aa20.58■□□□□ 0.88
MBD1-205ENST00000353909 DUSP27Q5VZP5 1158 aa20.58■□□□□ 0.88
MBD1-205ENST00000353909 SPINK5Q9NQ38 1064 aaPredicted RBP20.58■□□□□ 0.88
MBD1-205ENST00000353909 ZMYM3Q14202 1370 aa20.57■□□□□ 0.88
MBD1-205ENST00000353909 PUS7Q96PZ0 661 aaKnown RBP20.56■□□□□ 0.88
MBD1-205ENST00000353909 POLR3AO14802 1390 aaPredicted RBP20.56■□□□□ 0.88
MBD1-205ENST00000353909 A0A1W2PP64 1363 aa20.56■□□□□ 0.88
MBD1-205ENST00000353909 MTHFSP49914 203 aa20.55■□□□□ 0.88
MBD1-205ENST00000353909 WAPLQ7Z5K2 1190 aa20.55■□□□□ 0.88
MBD1-205ENST00000353909 DMRT2Q9Y5R5 561 aa20.55■□□□□ 0.88
MBD1-205ENST00000353909 RIMS2Q9UQ26 1411 aa20.55■□□□□ 0.88
MBD1-205ENST00000353909 GOLGA2Q08379 1002 aa20.55■□□□□ 0.88
MBD1-205ENST00000353909 ESF1Q9H501 851 aaKnown RBP20.54■□□□□ 0.88
MBD1-205ENST00000353909 GGNBP2Q9H3C7 697 aa20.52■□□□□ 0.88
MBD1-205ENST00000353909 SHPRHQ149N8 1683 aa20.51■□□□□ 0.87
MBD1-205ENST00000353909 SLFN5Q08AF3 891 aa20.51■□□□□ 0.87
MBD1-205ENST00000353909 CDK19Q9BWU1 502 aa20.51■□□□□ 0.87
MBD1-205ENST00000353909 USP32Q8NFA0 1604 aa20.51■□□□□ 0.87
MBD1-205ENST00000353909 C20orf194Q5TEA3 1177 aa20.51■□□□□ 0.87
MBD1-205ENST00000353909 NEUROD2Q15784 382 aa20.49■□□□□ 0.87
MBD1-205ENST00000353909 CD163L1Q9NR16 1453 aa20.49■□□□□ 0.87
MBD1-205ENST00000353909 RRP7AQ9Y3A4 280 aaKnown RBP20.49■□□□□ 0.87
MBD1-205ENST00000353909 CABP1Q9NZU7 370 aa20.48■□□□□ 0.87
MBD1-205ENST00000353909 ABCC11Q96J66 1382 aa20.47■□□□□ 0.87
MBD1-205ENST00000353909 SETD1AO15047 1707 aaKnown RBP20.47■□□□□ 0.87
MBD1-205ENST00000353909 METP08581 1390 aa20.47■□□□□ 0.87
MBD1-205ENST00000353909 TRMT2AQ8IZ69 625 aaKnown RBP20.46■□□□□ 0.87
MBD1-205ENST00000353909 CRBNQ96SW2 442 aa20.46■□□□□ 0.87
MBD1-205ENST00000353909 ATAD2Q6PL18 1390 aa20.46■□□□□ 0.87
MBD1-205ENST00000353909 FYB1O15117 783 aa20.46■□□□□ 0.87
MBD1-205ENST00000353909 NRXN3Q9Y4C0 1643 aa20.45■□□□□ 0.86
MBD1-205ENST00000353909 CEBPAP49715 358 aaPredicted RBP20.44■□□□□ 0.86
MBD1-205ENST00000353909 TXNDC2Q86VQ3 553 aa20.44■□□□□ 0.86
MBD1-205ENST00000353909 TERF2IPQ9NYB0 399 aa20.44■□□□□ 0.86
MBD1-205ENST00000353909 WWC1Q8IX03 1113 aa20.43■□□□□ 0.86
MBD1-205ENST00000353909 NSD2O96028 1365 aa20.43■□□□□ 0.86
MBD1-205ENST00000353909 NINLQ9Y2I6 1382 aa20.43■□□□□ 0.86
MBD1-205ENST00000353909 TCP11L2Q8N4U5 519 aa20.43■□□□□ 0.86
MBD1-205ENST00000353909 TNRQ92752 1358 aa20.42■□□□□ 0.86
MBD1-205ENST00000353909 PLPPR3Q6T4P5 718 aa20.41■□□□□ 0.86
MBD1-205ENST00000353909 CFAP53Q96M91 514 aa20.41■□□□□ 0.86
MBD1-205ENST00000353909 FBLN1P23142 703 aa20.4■□□□□ 0.86
MBD1-205ENST00000353909 RUNDC1Q96C34 613 aa20.4■□□□□ 0.86
MBD1-205ENST00000353909 NLRP1Q9C000 1473 aa20.4■□□□□ 0.86
MBD1-205ENST00000353909 U2AF1L5P0DN76 240 aaPredicted RBP20.4■□□□□ 0.86
MBD1-205ENST00000353909 U2AF1Q01081 240 aaKnown RBP eCLIP20.4■□□□□ 0.86
MBD1-205ENST00000353909 E9PSI1 815 aa20.39■□□□□ 0.85
MBD1-205ENST00000353909 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.39■□□□□ 0.85
MBD1-205ENST00000353909 NCKAP5LQ9HCH0 1330 aa20.39■□□□□ 0.85
MBD1-205ENST00000353909 BCAR3O75815 825 aa20.39■□□□□ 0.85
MBD1-205ENST00000353909 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.38■□□□□ 0.85
MBD1-205ENST00000353909 DLC1Q96QB1 1528 aa20.38■□□□□ 0.85
MBD1-205ENST00000353909 HDGFL2Q7Z4V5 671 aaPredicted RBP20.38■□□□□ 0.85
MBD1-205ENST00000353909 NKTRP30414 1462 aaKnown RBP20.38■□□□□ 0.85
MBD1-205ENST00000353909 IQSEC2Q5JU85 1478 aa20.36■□□□□ 0.85
MBD1-205ENST00000353909 TMEM2Q9UHN6 1383 aa20.36■□□□□ 0.85
MBD1-205ENST00000353909 SKAP1Q86WV1 359 aa20.36■□□□□ 0.85
MBD1-205ENST00000353909 LTKP29376 864 aa20.35■□□□□ 0.85
MBD1-205ENST00000353909 U2SURPO15042 1029 aaKnown RBP20.35■□□□□ 0.85
MBD1-205ENST00000353909 UBR1Q8IWV7 1749 aa20.34■□□□□ 0.85
MBD1-205ENST00000353909 WASLO00401 505 aaPredicted RBP20.34■□□□□ 0.85
MBD1-205ENST00000353909 MSH5O43196 834 aa20.34■□□□□ 0.85
MBD1-205ENST00000353909 PHF23Q9BUL5 403 aaPredicted RBP20.34■□□□□ 0.85
MBD1-205ENST00000353909 NGEFQ8N5V2 710 aa20.33■□□□□ 0.85
MBD1-205ENST00000353909 COL3A1P02461 1466 aaPredicted RBP20.31■□□□□ 0.84
MBD1-205ENST00000353909 ANKRD26Q9UPS8 1709 aa20.31■□□□□ 0.84
MBD1-205ENST00000353909 ZRANB1Q9UGI0 708 aa20.31■□□□□ 0.84
MBD1-205ENST00000353909 HDGFP51858 240 aaKnown RBP20.3■□□□□ 0.84
MBD1-205ENST00000353909 MED14O60244 1454 aa20.29■□□□□ 0.84
MBD1-205ENST00000353909 PPIP5K1Q6PFW1 1433 aa20.29■□□□□ 0.84
MBD1-205ENST00000353909 ADAMTS13Q76LX8 1427 aa20.29■□□□□ 0.84
MBD1-205ENST00000353909 PPM1GO15355 546 aaPredicted RBP20.29■□□□□ 0.84
MBD1-205ENST00000353909 ROBO2Q9HCK4 1378 aa20.29■□□□□ 0.84
MBD1-205ENST00000353909 NUDT16Q96DE0 195 aaKnown RBP20.29■□□□□ 0.84
MBD1-205ENST00000353909 SLC26A8Q96RN1 970 aa20.29■□□□□ 0.84
MBD1-205ENST00000353909 FANCIQ9NVI1 1328 aa20.29■□□□□ 0.84
MBD1-205ENST00000353909 PLEKHF1Q96S99 279 aa20.28■□□□□ 0.84
MBD1-205ENST00000353909 KIF20BQ96Q89 1820 aa20.27■□□□□ 0.84
MBD1-205ENST00000353909 NME9Q86XW9 330 aa20.27■□□□□ 0.84
MBD1-205ENST00000353909 ATP7BP35670 1465 aa20.27■□□□□ 0.84
MBD1-205ENST00000353909 NUTM2FA1L443 756 aa20.26■□□□□ 0.83
MBD1-205ENST00000353909 TRHP20396 242 aaPredicted RBP20.26■□□□□ 0.83
MBD1-205ENST00000353909 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.26■□□□□ 0.83
MBD1-205ENST00000353909 POLKQ9UBT6 870 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms