RNA–Protein interactions for RNA: ENST00000353278.8

SLC6A20-201, Transcript of solute carrier family 6 member 20, humanhuman

TSL 1 (best) BASIC

Gene SLC6A20, Length 5,247 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A20-201ENST00000353278 ERC2O15083 957 aa13.74□□□□□ -0.21
SLC6A20-201ENST00000353278 HFM1A2PYH4 1435 aa13.74□□□□□ -0.21
SLC6A20-201ENST00000353278 TPD52L1Q16890 204 aaPredicted RBP13.74□□□□□ -0.21
SLC6A20-201ENST00000353278 CCDC43Q96MW1 224 aaKnown RBP13.73□□□□□ -0.21
SLC6A20-201ENST00000353278 FOXD4L1Q9NU39 408 aa13.73□□□□□ -0.21
SLC6A20-201ENST00000353278 TOPBP1Q92547 1522 aa13.72□□□□□ -0.21
SLC6A20-201ENST00000353278 PES1O00541 588 aaKnown RBP13.72□□□□□ -0.21
SLC6A20-201ENST00000353278 UBTFL1P0CB47 393 aaPredicted RBP13.72□□□□□ -0.21
SLC6A20-201ENST00000353278 FAM177BA6PVY3 158 aa13.72□□□□□ -0.21
SLC6A20-201ENST00000353278 PHF14O94880 888 aa13.72□□□□□ -0.21
SLC6A20-201ENST00000353278 CCDC47Q96A33 483 aaKnown RBP13.72□□□□□ -0.21
SLC6A20-201ENST00000353278 MTHFSP49914 203 aa13.72□□□□□ -0.21
SLC6A20-201ENST00000353278 CCDC27Q2M243 656 aa13.72□□□□□ -0.21
SLC6A20-201ENST00000353278 SAMD1Q6SPF0 538 aaPredicted RBP13.72□□□□□ -0.21
SLC6A20-201ENST00000353278 NFXL1Q6ZNB6 911 aa13.72□□□□□ -0.21
SLC6A20-201ENST00000353278 TROQ12816 1431 aaPredicted RBP13.72□□□□□ -0.21
SLC6A20-201ENST00000353278 TPM3P06753 285 aa13.71□□□□□ -0.21
SLC6A20-201ENST00000353278 MCTP1Q6DN14 999 aa13.71□□□□□ -0.21
SLC6A20-201ENST00000353278 CCDC30Q5VVM6 783 aa13.71□□□□□ -0.21
SLC6A20-201ENST00000353278 ANO8Q9HCE9 1232 aaPredicted RBP13.71□□□□□ -0.21
SLC6A20-201ENST00000353278 GZF1Q9H116 711 aaPredicted RBP13.71□□□□□ -0.21
SLC6A20-201ENST00000353278 SPG7Q9UQ90 795 aa13.71□□□□□ -0.21
SLC6A20-201ENST00000353278 C9orf84Q5VXU9 1444 aa13.71□□□□□ -0.22
SLC6A20-201ENST00000353278 DDX54Q8TDD1 881 aaKnown RBP13.71□□□□□ -0.22
SLC6A20-201ENST00000353278 PLIN1O60240 522 aa13.7□□□□□ -0.22
SLC6A20-201ENST00000353278 PDE4CQ08493 712 aa13.7□□□□□ -0.22
SLC6A20-201ENST00000353278 ANO2Q9NQ90 1003 aa13.7□□□□□ -0.22
SLC6A20-201ENST00000353278 TPM2P07951 284 aa13.7□□□□□ -0.22
SLC6A20-201ENST00000353278 CABP4P57796 275 aa13.7□□□□□ -0.22
SLC6A20-201ENST00000353278 WASHC4Q2M389 1173 aa13.7□□□□□ -0.22
SLC6A20-201ENST00000353278 RALYLQ86SE5 291 aaKnown RBP13.7□□□□□ -0.22
SLC6A20-201ENST00000353278 RPGRIP1LQ68CZ1 1315 aa13.7□□□□□ -0.22
SLC6A20-201ENST00000353278 TSR1Q2NL82 804 aaKnown RBP13.69□□□□□ -0.22
SLC6A20-201ENST00000353278 CDK19Q9BWU1 502 aa13.69□□□□□ -0.22
SLC6A20-201ENST00000353278 RRP1P56182 461 aaKnown RBP13.69□□□□□ -0.22
SLC6A20-201ENST00000353278 ZBED9Q6R2W3 1325 aa13.68□□□□□ -0.22
SLC6A20-201ENST00000353278 TSHZ2Q9NRE2 1034 aa13.68□□□□□ -0.22
SLC6A20-201ENST00000353278 TBC1D2BQ9UPU7 963 aa13.68□□□□□ -0.22
SLC6A20-201ENST00000353278 KIF21BO75037 1637 aa13.68□□□□□ -0.22
SLC6A20-201ENST00000353278 GNAI3P08754 354 aa13.68□□□□□ -0.22
SLC6A20-201ENST00000353278 POLA1P09884 1462 aaPredicted RBP13.68□□□□□ -0.22
SLC6A20-201ENST00000353278 FOXD4L5Q5VV16 416 aaPredicted RBP13.68□□□□□ -0.22
SLC6A20-201ENST00000353278 ZNF530Q6P9A1 599 aaPredicted RBP13.68□□□□□ -0.22
SLC6A20-201ENST00000353278 FOXD4L4Q8WXT5 416 aaPredicted RBP13.68□□□□□ -0.22
SLC6A20-201ENST00000353278 RTEL1-TNFRSF6BF6WH68 1400 aa13.68□□□□□ -0.22
SLC6A20-201ENST00000353278 DEKP35659 375 aaKnown RBP13.67□□□□□ -0.22
SLC6A20-201ENST00000353278 PNISRQ8TF01 805 aaKnown RBP13.67□□□□□ -0.22
SLC6A20-201ENST00000353278 CNKSR2Q8WXI2 1034 aa13.67□□□□□ -0.22
SLC6A20-201ENST00000353278 FYB1O15117 783 aa13.67□□□□□ -0.22
SLC6A20-201ENST00000353278 PRKAR2BP31323 418 aa13.67□□□□□ -0.22
SLC6A20-201ENST00000353278 CCAR1Q8IX12 1150 aaKnown RBP13.67□□□□□ -0.22
SLC6A20-201ENST00000353278 CABP1Q9NZU7 370 aa13.67□□□□□ -0.22
SLC6A20-201ENST00000353278 HMGXB3Q12766 1538 aa13.67□□□□□ -0.22
SLC6A20-201ENST00000353278 CRBNQ96SW2 442 aa13.67□□□□□ -0.22
SLC6A20-201ENST00000353278 KIF7Q2M1P5 1343 aa13.66□□□□□ -0.22
SLC6A20-201ENST00000353278 SAFBQ15424 915 aaKnown RBP eCLIP13.66□□□□□ -0.22
SLC6A20-201ENST00000353278 CLASRPQ8N2M8 674 aaKnown RBP13.66□□□□□ -0.22
SLC6A20-201ENST00000353278 EFCAB5A4FU69 1503 aa13.66□□□□□ -0.22
SLC6A20-201ENST00000353278 CCDC7Q96M83 1385 aa13.66□□□□□ -0.22
SLC6A20-201ENST00000353278 IKQ13123 557 aaPredicted RBP13.66□□□□□ -0.22
SLC6A20-201ENST00000353278 TPM1P09493 284 aa13.65□□□□□ -0.22
SLC6A20-201ENST00000353278 GNL3LQ9NVN8 582 aaKnown RBP13.65□□□□□ -0.22
SLC6A20-201ENST00000353278 FAM161AQ3B820 660 aa13.65□□□□□ -0.23
SLC6A20-201ENST00000353278 DMRT2Q9Y5R5 561 aa13.65□□□□□ -0.23
SLC6A20-201ENST00000353278 ANKRD30BQ9BXX2 1392 aa13.64□□□□□ -0.23
SLC6A20-201ENST00000353278 CD109Q6YHK3 1445 aa13.64□□□□□ -0.23
SLC6A20-201ENST00000353278 ERICH3Q5RHP9 1530 aa13.64□□□□□ -0.23
SLC6A20-201ENST00000353278 SULT6B1Q6IMI4 303 aa13.64□□□□□ -0.23
SLC6A20-201ENST00000353278 BECN2A8MW95 431 aa13.64□□□□□ -0.23
SLC6A20-201ENST00000353278 TCP11L2Q8N4U5 519 aa13.63□□□□□ -0.23
SLC6A20-201ENST00000353278 A0A0U1RQG5 324 aaPredicted RBP13.63□□□□□ -0.23
SLC6A20-201ENST00000353278 KRI1Q8N9T8 703 aaKnown RBP13.63□□□□□ -0.23
SLC6A20-201ENST00000353278 EXOC6Q8TAG9 804 aa13.63□□□□□ -0.23
SLC6A20-201ENST00000353278 CNNM1Q9NRU3 951 aa13.63□□□□□ -0.23
SLC6A20-201ENST00000353278 AAMPQ13685 434 aa13.63□□□□□ -0.23
SLC6A20-201ENST00000353278 HDGFL1Q5TGJ6 251 aa13.63□□□□□ -0.23
SLC6A20-201ENST00000353278 KIAA0586Q9BVV6 1533 aa13.63□□□□□ -0.23
SLC6A20-201ENST00000353278 GOLGA6L19H0YKK7 550 aa13.63□□□□□ -0.23
SLC6A20-201ENST00000353278 INTS3Q68E01 1043 aaKnown RBP13.63□□□□□ -0.23
SLC6A20-201ENST00000353278 SLC12A5Q9H2X9 1139 aa13.63□□□□□ -0.23
SLC6A20-201ENST00000353278 ANKRD20A12PQ8NF67 263 aa13.62□□□□□ -0.23
SLC6A20-201ENST00000353278 HOOK1Q9UJC3 728 aaKnown RBP13.62□□□□□ -0.23
SLC6A20-201ENST00000353278 SLC3A2P08195 630 aaKnown RBP13.62□□□□□ -0.23
SLC6A20-201ENST00000353278 SART3Q15020 963 aaKnown RBP13.62□□□□□ -0.23
SLC6A20-201ENST00000353278 R3HCC1Q9Y3T6 440 aaKnown RBP13.62□□□□□ -0.23
SLC6A20-201ENST00000353278 ATAD2Q6PL18 1390 aa13.62□□□□□ -0.23
SLC6A20-201ENST00000353278 KCNH5Q8NCM2 988 aa13.62□□□□□ -0.23
SLC6A20-201ENST00000353278 EHBP1L1Q8N3D4 1523 aa13.62□□□□□ -0.23
SLC6A20-201ENST00000353278 SURF6O75683 361 aaKnown RBP13.61□□□□□ -0.23
SLC6A20-201ENST00000353278 CNTLNQ9NXG0 1405 aa13.61□□□□□ -0.23
SLC6A20-201ENST00000353278 XBP1P17861 261 aa13.61□□□□□ -0.23
SLC6A20-201ENST00000353278 ZC3H6P61129 1189 aaKnown RBP13.61□□□□□ -0.23
SLC6A20-201ENST00000353278 XPCQ01831 940 aaPredicted RBP13.61□□□□□ -0.23
SLC6A20-201ENST00000353278 BRMS1Q9HCU9 246 aa13.61□□□□□ -0.23
SLC6A20-201ENST00000353278 GOLGA6L3A6NEY3 463 aa13.6□□□□□ -0.23
SLC6A20-201ENST00000353278 FSD1Q9BTV5 496 aa13.6□□□□□ -0.23
SLC6A20-201ENST00000353278 ERBINQ96RT1 1412 aa13.6□□□□□ -0.23
SLC6A20-201ENST00000353278 DDX11L8A8MPP1 907 aa13.6□□□□□ -0.23
SLC6A20-201ENST00000353278 CCDC61Q9Y6R9 512 aa13.6□□□□□ -0.23
SLC6A20-201ENST00000353278 NINLQ9Y2I6 1382 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms