RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 NSD3Q9BZ95 1437 aa15.35■□□□□ 0.05
SMAD9-201ENST00000350148 MLH3Q9UHC1 1453 aa15.35■□□□□ 0.05
SMAD9-201ENST00000350148 RIPK4P57078 832 aa15.35■□□□□ 0.05
SMAD9-201ENST00000350148 CABP1Q9NZU7 370 aa15.34■□□□□ 0.05
SMAD9-201ENST00000350148 MSH5O43196 834 aa15.34■□□□□ 0.05
SMAD9-201ENST00000350148 C1orf141Q5JVX7 400 aa15.34■□□□□ 0.05
SMAD9-201ENST00000350148 FBXO31Q5XUX0 539 aaPredicted RBP15.34■□□□□ 0.05
SMAD9-201ENST00000350148 CT47B1P0C2W7 299 aaPredicted RBP15.34■□□□□ 0.05
SMAD9-201ENST00000350148 CENPQQ7L2Z9 268 aaPredicted RBP15.34■□□□□ 0.05
SMAD9-201ENST00000350148 RRP7AQ9Y3A4 280 aaKnown RBP15.33■□□□□ 0.04
SMAD9-201ENST00000350148 PLXNC1O60486 1568 aa15.33■□□□□ 0.04
SMAD9-201ENST00000350148 AMER1Q5JTC6 1135 aaPredicted RBP15.33■□□□□ 0.04
SMAD9-201ENST00000350148 OS9Q13438 667 aaPredicted RBP15.33■□□□□ 0.04
SMAD9-201ENST00000350148 C11orf95C9JLR9 678 aaPredicted RBP15.32■□□□□ 0.04
SMAD9-201ENST00000350148 ZFYVE16Q7Z3T8 1539 aa15.32■□□□□ 0.04
SMAD9-201ENST00000350148 SMG6Q86US8 1419 aaKnown RBP15.32■□□□□ 0.04
SMAD9-201ENST00000350148 PROSER2Q86WR7 435 aaPredicted RBP15.32■□□□□ 0.04
SMAD9-201ENST00000350148 KIF16BQ96L93 1317 aa15.32■□□□□ 0.04
SMAD9-201ENST00000350148 API5Q9BZZ5 524 aaKnown RBP15.31■□□□□ 0.04
SMAD9-201ENST00000350148 WDR63Q8IWG1 891 aa15.31■□□□□ 0.04
SMAD9-201ENST00000350148 NUDT16Q96DE0 195 aaKnown RBP15.3■□□□□ 0.04
SMAD9-201ENST00000350148 RIMS2Q9UQ26 1411 aa15.3■□□□□ 0.04
SMAD9-201ENST00000350148 NLRP6P59044 892 aa15.3■□□□□ 0.04
SMAD9-201ENST00000350148 GAS2L2Q8NHY3 880 aa15.3■□□□□ 0.04
SMAD9-201ENST00000350148 CDC42BPAQ5VT25 1732 aa15.3■□□□□ 0.04
SMAD9-201ENST00000350148 LTV1Q96GA3 475 aaPredicted RBP15.3■□□□□ 0.04
SMAD9-201ENST00000350148 SHROOM2Q13796 1616 aa15.29■□□□□ 0.04
SMAD9-201ENST00000350148 DDX19BQ9UMR2 479 aa15.29■□□□□ 0.04
SMAD9-201ENST00000350148 WASLO00401 505 aaPredicted RBP15.28■□□□□ 0.04
SMAD9-201ENST00000350148 TCP11L2Q8N4U5 519 aa15.28■□□□□ 0.04
SMAD9-201ENST00000350148 PODXL2Q9NZ53 605 aa15.28■□□□□ 0.04
SMAD9-201ENST00000350148 DISP3Q9P2K9 1392 aa15.28■□□□□ 0.04
SMAD9-201ENST00000350148 TEFQ10587 303 aa15.28■□□□□ 0.04
SMAD9-201ENST00000350148 SLC26A8Q96RN1 970 aa15.26■□□□□ 0.03
SMAD9-201ENST00000350148 ANKRD36BQ8N2N9 1353 aa15.26■□□□□ 0.03
SMAD9-201ENST00000350148 FCHSD2O94868 740 aa15.26■□□□□ 0.03
SMAD9-201ENST00000350148 MCCP23508 829 aa15.26■□□□□ 0.03
SMAD9-201ENST00000350148 ERCC6L2Q5T890 1561 aa15.25■□□□□ 0.03
SMAD9-201ENST00000350148 ABTB2Q8N961 1025 aa15.25■□□□□ 0.03
SMAD9-201ENST00000350148 HECW2Q9P2P5 1572 aa15.25■□□□□ 0.03
SMAD9-201ENST00000350148 ASXL1Q8IXJ9 1541 aa15.25■□□□□ 0.03
SMAD9-201ENST00000350148 GOLGA6L22H0YM25 854 aa15.25■□□□□ 0.03
SMAD9-201ENST00000350148 ZNF428Q96B54 188 aa15.24■□□□□ 0.03
SMAD9-201ENST00000350148 ZMYM3Q14202 1370 aa15.24■□□□□ 0.03
SMAD9-201ENST00000350148 ESCO1Q5FWF5 840 aa15.24■□□□□ 0.03
SMAD9-201ENST00000350148 ABCC11Q96J66 1382 aa15.24■□□□□ 0.03
SMAD9-201ENST00000350148 DZIP1LQ8IYY4 767 aaKnown RBP15.24■□□□□ 0.03
SMAD9-201ENST00000350148 TRPM2O94759 1503 aa15.23■□□□□ 0.03
SMAD9-201ENST00000350148 COL17A1Q9UMD9 1497 aaPredicted RBP15.23■□□□□ 0.03
SMAD9-201ENST00000350148 CRBNQ96SW2 442 aa15.22■□□□□ 0.03
SMAD9-201ENST00000350148 AMOTL2Q9Y2J4 779 aa15.22■□□□□ 0.03
SMAD9-201ENST00000350148 KCNH5Q8NCM2 988 aa15.22■□□□□ 0.03
SMAD9-201ENST00000350148 CROCC2H7BZ55 1655 aa15.22■□□□□ 0.03
SMAD9-201ENST00000350148 RAPGEF4Q8WZA2 1011 aa15.22■□□□□ 0.03
SMAD9-201ENST00000350148 PRKAR2BP31323 418 aa15.21■□□□□ 0.03
SMAD9-201ENST00000350148 EVA1CP58658 441 aa15.21■□□□□ 0.03
SMAD9-201ENST00000350148 PDE3AQ14432 1141 aa15.21■□□□□ 0.03
SMAD9-201ENST00000350148 EXOC6Q8TAG9 804 aa15.21■□□□□ 0.03
SMAD9-201ENST00000350148 NPC1L1Q9UHC9 1359 aa15.21■□□□□ 0.02
SMAD9-201ENST00000350148 GPATCH3Q96I76 525 aa15.21■□□□□ 0.02
SMAD9-201ENST00000350148 TESK2Q96S53 571 aa15.21■□□□□ 0.02
SMAD9-201ENST00000350148 PLEKHO1Q53GL0 409 aaPredicted RBP15.2■□□□□ 0.02
SMAD9-201ENST00000350148 CLUAP1Q96AJ1 413 aa15.2■□□□□ 0.02
SMAD9-201ENST00000350148 WAPLQ7Z5K2 1190 aa15.2■□□□□ 0.02
SMAD9-201ENST00000350148 ABCA9Q8IUA7 1624 aa15.2■□□□□ 0.02
SMAD9-201ENST00000350148 PTPRTO14522 1441 aa15.2■□□□□ 0.02
SMAD9-201ENST00000350148 IQGAP3Q86VI3 1631 aa15.19■□□□□ 0.02
SMAD9-201ENST00000350148 PARD3Q8TEW0 1356 aa15.19■□□□□ 0.02
SMAD9-201ENST00000350148 HMOX1P09601 288 aa15.19■□□□□ 0.02
SMAD9-201ENST00000350148 MYOM2P54296 1465 aa15.18■□□□□ 0.02
SMAD9-201ENST00000350148 TTC5Q8N0Z6 440 aa15.18■□□□□ 0.02
SMAD9-201ENST00000350148 TSPYL4Q9UJ04 414 aa15.18■□□□□ 0.02
SMAD9-201ENST00000350148 KDM6BO15054 1643 aa15.18■□□□□ 0.02
SMAD9-201ENST00000350148 LRPPRCP42704 1394 aaKnown RBP15.18■□□□□ 0.02
SMAD9-201ENST00000350148 UNC13BO14795 1591 aa15.18■□□□□ 0.02
SMAD9-201ENST00000350148 HSCBQ8IWL3 235 aa15.18■□□□□ 0.02
SMAD9-201ENST00000350148 TET3O43151 1660 aa15.17■□□□□ 0.02
SMAD9-201ENST00000350148 DDX58O95786 925 aaKnown RBP15.17■□□□□ 0.02
SMAD9-201ENST00000350148 IL27Q8NEV9 243 aa15.17■□□□□ 0.02
SMAD9-201ENST00000350148 NPATQ14207 1427 aa15.17■□□□□ 0.02
SMAD9-201ENST00000350148 TTC21AQ8NDW8 1320 aa15.17■□□□□ 0.02
SMAD9-201ENST00000350148 FANCIQ9NVI1 1328 aa15.17■□□□□ 0.02
SMAD9-201ENST00000350148 SLC4A10Q6U841 1118 aa15.16■□□□□ 0.02
SMAD9-201ENST00000350148 YTHDC2Q9H6S0 1430 aaKnown RBP15.16■□□□□ 0.02
SMAD9-201ENST00000350148 VSIG10Q8N0Z9 540 aa15.16■□□□□ 0.02
SMAD9-201ENST00000350148 CEBPAP49715 358 aaPredicted RBP15.15■□□□□ 0.02
SMAD9-201ENST00000350148 CCDC184Q52MB2 194 aa15.15■□□□□ 0.02
SMAD9-201ENST00000350148 PKNOX2Q96KN3 472 aa15.15■□□□□ 0.02
SMAD9-201ENST00000350148 COG6Q9Y2V7 657 aa15.15■□□□□ 0.02
SMAD9-201ENST00000350148 PIK3C2GO75747 1445 aa15.15■□□□□ 0.02
SMAD9-201ENST00000350148 TTC21BQ7Z4L5 1316 aa15.15■□□□□ 0.02
SMAD9-201ENST00000350148 SIRT1Q96EB6 747 aa15.15■□□□□ 0.02
SMAD9-201ENST00000350148 SBNO2Q9Y2G9 1366 aa15.15■□□□□ 0.02
SMAD9-201ENST00000350148 PLIN1O60240 522 aa15.14■□□□□ 0.02
SMAD9-201ENST00000350148 NFE2L2Q16236 605 aa15.14■□□□□ 0.02
SMAD9-201ENST00000350148 TBX22Q9Y458 520 aa15.14■□□□□ 0.01
SMAD9-201ENST00000350148 INSRP06213 1382 aa15.14■□□□□ 0.01
SMAD9-201ENST00000350148 HSP90AB1P08238 724 aaKnown RBP15.14■□□□□ 0.01
SMAD9-201ENST00000350148 NEXNQ0ZGT2 675 aa15.14■□□□□ 0.01
SMAD9-201ENST00000350148 SLFN5Q08AF3 891 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms