RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 ADAMTSL3P82987 1691 aa22.18■■□□□ 1.14
SAMM50-201ENST00000350028 ZMYM3Q14202 1370 aa22.18■■□□□ 1.14
SAMM50-201ENST00000350028 RIMS2Q9UQ26 1411 aa22.17■■□□□ 1.14
SAMM50-201ENST00000350028 ANKRD36BQ8N2N9 1353 aa22.17■■□□□ 1.14
SAMM50-201ENST00000350028 MORC1Q86VD1 984 aa22.15■■□□□ 1.14
SAMM50-201ENST00000350028 POLR3AO14802 1390 aaPredicted RBP22.15■■□□□ 1.14
SAMM50-201ENST00000350028 CGNL1Q0VF96 1302 aa22.15■■□□□ 1.14
SAMM50-201ENST00000350028 POGKQ9P215 609 aa22.14■■□□□ 1.14
SAMM50-201ENST00000350028 RCAN3Q9UKA8 241 aa22.14■■□□□ 1.14
SAMM50-201ENST00000350028 NSD2O96028 1365 aa22.14■■□□□ 1.13
SAMM50-201ENST00000350028 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.14■■□□□ 1.13
SAMM50-201ENST00000350028 C3P01024 1663 aa22.13■■□□□ 1.13
SAMM50-201ENST00000350028 PRAM1Q96QH2 718 aa22.13■■□□□ 1.13
SAMM50-201ENST00000350028 CABP2Q9NPB3 220 aa22.13■■□□□ 1.13
SAMM50-201ENST00000350028 ATAD2Q6PL18 1390 aa22.12■■□□□ 1.13
SAMM50-201ENST00000350028 DLC1Q96QB1 1528 aa22.12■■□□□ 1.13
SAMM50-201ENST00000350028 SAFB2Q14151 953 aaKnown RBP eCLIP22.12■■□□□ 1.13
SAMM50-201ENST00000350028 CDCA7LQ96GN5 454 aa22.12■■□□□ 1.13
SAMM50-201ENST00000350028 RIMS1Q86UR5 1692 aaKnown RBP22.11■■□□□ 1.13
SAMM50-201ENST00000350028 CEBPAP49715 358 aaPredicted RBP22.11■■□□□ 1.13
SAMM50-201ENST00000350028 HDGFP51858 240 aaKnown RBP22.1■■□□□ 1.13
SAMM50-201ENST00000350028 RRP1P56182 461 aaKnown RBP22.1■■□□□ 1.13
SAMM50-201ENST00000350028 SRPK2P78362 688 aaKnown RBP22.1■■□□□ 1.13
SAMM50-201ENST00000350028 SETD1AO15047 1707 aaKnown RBP22.09■■□□□ 1.13
SAMM50-201ENST00000350028 NGEFQ8N5V2 710 aa22.09■■□□□ 1.13
SAMM50-201ENST00000350028 SENP3Q9H4L4 574 aaPredicted RBP22.09■■□□□ 1.13
SAMM50-201ENST00000350028 MINK1Q8N4C8 1332 aaPredicted RBP22.08■■□□□ 1.13
SAMM50-201ENST00000350028 TNRQ92752 1358 aa22.08■■□□□ 1.13
SAMM50-201ENST00000350028 B4GALNT3Q6L9W6 998 aa22.07■■□□□ 1.12
SAMM50-201ENST00000350028 ZNF521Q96K83 1311 aa22.07■■□□□ 1.12
SAMM50-201ENST00000350028 PLEKHH1Q9ULM0 1364 aa22.07■■□□□ 1.12
SAMM50-201ENST00000350028 ABCC11Q96J66 1382 aa22.06■■□□□ 1.12
SAMM50-201ENST00000350028 TERF2IPQ9NYB0 399 aa22.05■■□□□ 1.12
SAMM50-201ENST00000350028 GOLGA2Q08379 1002 aa22.04■■□□□ 1.12
SAMM50-201ENST00000350028 NRXN3Q9Y4C0 1643 aa22.03■■□□□ 1.12
SAMM50-201ENST00000350028 A0A1W2PP64 1363 aa22.03■■□□□ 1.12
SAMM50-201ENST00000350028 CFAP53Q96M91 514 aa22.03■■□□□ 1.12
SAMM50-201ENST00000350028 CDK19Q9BWU1 502 aa22.03■■□□□ 1.12
SAMM50-201ENST00000350028 SHPRHQ149N8 1683 aa22.02■■□□□ 1.11
SAMM50-201ENST00000350028 CCDC146Q8IYE0 955 aa22.01■■□□□ 1.11
SAMM50-201ENST00000350028 APAF1O14727 1248 aa22■■□□□ 1.11
SAMM50-201ENST00000350028 PLPPR3Q6T4P5 718 aa22■■□□□ 1.11
SAMM50-201ENST00000350028 TNNT2P45379 298 aaPredicted RBP22■■□□□ 1.11
SAMM50-201ENST00000350028 HDGFL2Q7Z4V5 671 aaPredicted RBP22■■□□□ 1.11
SAMM50-201ENST00000350028 UBR1Q8IWV7 1749 aa21.99■■□□□ 1.11
SAMM50-201ENST00000350028 MED14O60244 1454 aa21.99■■□□□ 1.11
SAMM50-201ENST00000350028 MTHFSP49914 203 aa21.99■■□□□ 1.11
SAMM50-201ENST00000350028 DUSP27Q5VZP5 1158 aa21.99■■□□□ 1.11
SAMM50-201ENST00000350028 SIRT1Q96EB6 747 aa21.99■■□□□ 1.11
SAMM50-201ENST00000350028 CCDC136Q96JN2 1154 aa21.99■■□□□ 1.11
SAMM50-201ENST00000350028 SLFN5Q08AF3 891 aa21.98■■□□□ 1.11
SAMM50-201ENST00000350028 CD163L1Q9NR16 1453 aa21.98■■□□□ 1.11
SAMM50-201ENST00000350028 TMEM2Q9UHN6 1383 aa21.97■■□□□ 1.11
SAMM50-201ENST00000350028 ANKRD26Q9UPS8 1709 aa21.97■■□□□ 1.11
SAMM50-201ENST00000350028 KNDC1Q76NI1 1749 aa21.97■■□□□ 1.11
SAMM50-201ENST00000350028 KDM4FA0A1W2PPD8 638 aa21.97■■□□□ 1.11
SAMM50-201ENST00000350028 TRMT2AQ8IZ69 625 aaKnown RBP21.97■■□□□ 1.11
SAMM50-201ENST00000350028 WAPLQ7Z5K2 1190 aa21.96■■□□□ 1.11
SAMM50-201ENST00000350028 NLRP1Q9C000 1473 aa21.95■■□□□ 1.1
SAMM50-201ENST00000350028 METP08581 1390 aa21.95■■□□□ 1.1
SAMM50-201ENST00000350028 RUNDC1Q96C34 613 aa21.94■■□□□ 1.1
SAMM50-201ENST00000350028 FAM135BQ49AJ0 1406 aa21.94■■□□□ 1.1
SAMM50-201ENST00000350028 TECPR2O15040 1411 aa21.94■■□□□ 1.1
SAMM50-201ENST00000350028 RBM19Q9Y4C8 960 aaKnown RBP21.93■■□□□ 1.1
SAMM50-201ENST00000350028 ATP7BP35670 1465 aa21.93■■□□□ 1.1
SAMM50-201ENST00000350028 E9PSI1 815 aa21.92■■□□□ 1.1
SAMM50-201ENST00000350028 FYB1O15117 783 aa21.92■■□□□ 1.1
SAMM50-201ENST00000350028 CABP1Q9NZU7 370 aa21.92■■□□□ 1.1
SAMM50-201ENST00000350028 EXOC6Q8TAG9 804 aa21.92■■□□□ 1.1
SAMM50-201ENST00000350028 NCBP3Q53F19 620 aaKnown RBP21.91■■□□□ 1.1
SAMM50-201ENST00000350028 GGNBP2Q9H3C7 697 aa21.91■■□□□ 1.1
SAMM50-201ENST00000350028 CPS1P31327 1500 aa21.9■■□□□ 1.1
SAMM50-201ENST00000350028 KIF20BQ96Q89 1820 aa21.89■■□□□ 1.1
SAMM50-201ENST00000350028 WASLO00401 505 aaPredicted RBP21.89■■□□□ 1.1
SAMM50-201ENST00000350028 PLEKHG1Q9ULL1 1385 aa21.88■■□□□ 1.09
SAMM50-201ENST00000350028 TXNDC2Q86VQ3 553 aa21.87■■□□□ 1.09
SAMM50-201ENST00000350028 WWC1Q8IX03 1113 aa21.87■■□□□ 1.09
SAMM50-201ENST00000350028 NKTRP30414 1462 aaKnown RBP21.87■■□□□ 1.09
SAMM50-201ENST00000350028 IQSEC2Q5JU85 1478 aa21.87■■□□□ 1.09
SAMM50-201ENST00000350028 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.86■■□□□ 1.09
SAMM50-201ENST00000350028 ADAMTS13Q76LX8 1427 aa21.86■■□□□ 1.09
SAMM50-201ENST00000350028 PLIN1O60240 522 aa21.85■■□□□ 1.09
SAMM50-201ENST00000350028 TCP11L2Q8N4U5 519 aa21.85■■□□□ 1.09
SAMM50-201ENST00000350028 CCDC27Q2M243 656 aa21.84■■□□□ 1.09
SAMM50-201ENST00000350028 SPINK5Q9NQ38 1064 aaPredicted RBP21.84■■□□□ 1.09
SAMM50-201ENST00000350028 PHF23Q9BUL5 403 aaPredicted RBP21.83■■□□□ 1.09
SAMM50-201ENST00000350028 CPSF1Q10570 1443 aaKnown RBP21.83■■□□□ 1.09
SAMM50-201ENST00000350028 SETD1BQ9UPS6 1966 aaKnown RBP21.83■■□□□ 1.09
SAMM50-201ENST00000350028 U2AF1L5P0DN76 240 aaPredicted RBP21.83■■□□□ 1.08
SAMM50-201ENST00000350028 U2AF1Q01081 240 aaKnown RBP eCLIP21.83■■□□□ 1.08
SAMM50-201ENST00000350028 WDR63Q8IWG1 891 aa21.83■■□□□ 1.08
SAMM50-201ENST00000350028 COL3A1P02461 1466 aaPredicted RBP21.83■■□□□ 1.08
SAMM50-201ENST00000350028 CEP170BQ9Y4F5 1589 aaPredicted RBP21.82■■□□□ 1.08
SAMM50-201ENST00000350028 EID1Q9Y6B2 187 aa21.82■■□□□ 1.08
SAMM50-201ENST00000350028 PPIP5K1Q6PFW1 1433 aa21.82■■□□□ 1.08
SAMM50-201ENST00000350028 LTKP29376 864 aa21.81■■□□□ 1.08
SAMM50-201ENST00000350028 CRBNQ96SW2 442 aa21.81■■□□□ 1.08
SAMM50-201ENST00000350028 SLIT1O75093 1534 aa21.81■■□□□ 1.08
SAMM50-201ENST00000350028 NUDT16Q96DE0 195 aaKnown RBP21.8■■□□□ 1.08
SAMM50-201ENST00000350028 EDC4Q6P2E9 1401 aaKnown RBP21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms