RNA–Protein interactions for RNA: ENST00000348986.3

CHRD-202, Transcript of chordin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHRD, Length 3,155 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-202ENST00000348986 GGNBP2Q9H3C7 697 aa23.19■■□□□ 1.3
CHRD-202ENST00000348986 WWC1Q8IX03 1113 aa23.18■■□□□ 1.3
CHRD-202ENST00000348986 ZBTB47Q9UFB7 747 aaPredicted RBP23.18■■□□□ 1.3
CHRD-202ENST00000348986 U2AF1L5P0DN76 240 aaPredicted RBP23.18■■□□□ 1.3
CHRD-202ENST00000348986 U2AF1Q01081 240 aaKnown RBP eCLIP23.18■■□□□ 1.3
CHRD-202ENST00000348986 TCP11L2Q8N4U5 519 aa23.18■■□□□ 1.3
CHRD-202ENST00000348986 IPO9Q96P70 1041 aaKnown RBP23.18■■□□□ 1.3
CHRD-202ENST00000348986 PRAM1Q96QH2 718 aa23.17■■□□□ 1.3
CHRD-202ENST00000348986 BCL2L13Q9BXK5 485 aa23.17■■□□□ 1.3
CHRD-202ENST00000348986 E9PSI1 815 aa23.17■■□□□ 1.3
CHRD-202ENST00000348986 SBNO2Q9Y2G9 1366 aa23.17■■□□□ 1.3
CHRD-202ENST00000348986 RGS3P49796 1198 aa23.17■■□□□ 1.3
CHRD-202ENST00000348986 IFT172Q9UG01 1749 aa23.15■■□□□ 1.3
CHRD-202ENST00000348986 U2SURPO15042 1029 aaKnown RBP23.15■■□□□ 1.3
CHRD-202ENST00000348986 CFAP74Q9C0B2 1584 aa23.15■■□□□ 1.3
CHRD-202ENST00000348986 NEO1Q92859 1461 aa23.15■■□□□ 1.3
CHRD-202ENST00000348986 ADGRB1O14514 1584 aa23.14■■□□□ 1.3
CHRD-202ENST00000348986 NEURL4Q96JN8 1562 aa23.14■■□□□ 1.29
CHRD-202ENST00000348986 CFAP53Q96M91 514 aa23.14■■□□□ 1.29
CHRD-202ENST00000348986 SLC52A1Q9NWF4 448 aa23.14■■□□□ 1.29
CHRD-202ENST00000348986 BACH2Q9BYV9 841 aa23.13■■□□□ 1.29
CHRD-202ENST00000348986 SIGLEC1Q9BZZ2 1709 aa23.12■■□□□ 1.29
CHRD-202ENST00000348986 PANK1Q8TE04 598 aa23.12■■□□□ 1.29
CHRD-202ENST00000348986 RUNDC1Q96C34 613 aa23.11■■□□□ 1.29
CHRD-202ENST00000348986 DIP2CQ9Y2E4 1556 aa23.11■■□□□ 1.29
CHRD-202ENST00000348986 PPLO60437 1756 aa23.11■■□□□ 1.29
CHRD-202ENST00000348986 TRMT2AQ8IZ69 625 aaKnown RBP23.11■■□□□ 1.29
CHRD-202ENST00000348986 POLR3AO14802 1390 aaPredicted RBP23.11■■□□□ 1.29
CHRD-202ENST00000348986 QRICH2Q9H0J4 1663 aa23.11■■□□□ 1.29
CHRD-202ENST00000348986 CAMSAP1Q5T5Y3 1602 aa23.1■■□□□ 1.29
CHRD-202ENST00000348986 COG6Q9Y2V7 657 aa23.1■■□□□ 1.29
CHRD-202ENST00000348986 NKTRP30414 1462 aaKnown RBP23.1■■□□□ 1.29
CHRD-202ENST00000348986 PPM1GO15355 546 aaPredicted RBP23.1■■□□□ 1.29
CHRD-202ENST00000348986 FBLN1P23142 703 aa23.09■■□□□ 1.29
CHRD-202ENST00000348986 SETBP1Q9Y6X0 1596 aa23.08■■□□□ 1.29
CHRD-202ENST00000348986 CLUAP1Q96AJ1 413 aa23.07■■□□□ 1.28
CHRD-202ENST00000348986 WAPLQ7Z5K2 1190 aa23.07■■□□□ 1.28
CHRD-202ENST00000348986 GLI2P10070 1586 aa23.06■■□□□ 1.28
CHRD-202ENST00000348986 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.06■■□□□ 1.28
CHRD-202ENST00000348986 CENPQQ7L2Z9 268 aaPredicted RBP23.05■■□□□ 1.28
CHRD-202ENST00000348986 TNNQ9UQP3 1299 aa23.05■■□□□ 1.28
CHRD-202ENST00000348986 MS4A1P11836 297 aa23.05■■□□□ 1.28
CHRD-202ENST00000348986 A0A1W2PP64 1363 aa23.05■■□□□ 1.28
CHRD-202ENST00000348986 CABP1Q9NZU7 370 aa23.04■■□□□ 1.28
CHRD-202ENST00000348986 ANKRD36BQ8N2N9 1353 aa23.04■■□□□ 1.28
CHRD-202ENST00000348986 NEXMIFQ5QGS0 1516 aa23.04■■□□□ 1.28
CHRD-202ENST00000348986 KDM2BQ8NHM5 1336 aa23.04■■□□□ 1.28
CHRD-202ENST00000348986 TULP4Q9NRJ4 1543 aa23.03■■□□□ 1.28
CHRD-202ENST00000348986 LAS1LQ9Y4W2 734 aaKnown RBP23.03■■□□□ 1.28
CHRD-202ENST00000348986 CDK19Q9BWU1 502 aa23.03■■□□□ 1.28
CHRD-202ENST00000348986 MYO3AQ8NEV4 1616 aa23.03■■□□□ 1.28
CHRD-202ENST00000348986 TSR2Q969E8 191 aaKnown RBP23.01■■□□□ 1.27
CHRD-202ENST00000348986 PLPPR3Q6T4P5 718 aa23.01■■□□□ 1.27
CHRD-202ENST00000348986 IGHDP01880 384 aa23■■□□□ 1.27
CHRD-202ENST00000348986 FYB1O15117 783 aa23■■□□□ 1.27
CHRD-202ENST00000348986 TERF2IPQ9NYB0 399 aa23■■□□□ 1.27
CHRD-202ENST00000348986 TSPOAP1O95153 1857 aa22.99■■□□□ 1.27
CHRD-202ENST00000348986 SLC4A3P48751 1232 aa22.99■■□□□ 1.27
CHRD-202ENST00000348986 PIK3C2BO00750 1634 aa22.98■■□□□ 1.27
CHRD-202ENST00000348986 ARHGAP31Q2M1Z3 1444 aa22.97■■□□□ 1.27
CHRD-202ENST00000348986 RICTORQ6R327 1708 aa22.97■■□□□ 1.27
CHRD-202ENST00000348986 RARSP54136 660 aaKnown RBP22.97■■□□□ 1.27
CHRD-202ENST00000348986 ESF1Q9H501 851 aaKnown RBP22.97■■□□□ 1.27
CHRD-202ENST00000348986 HDGFL2Q7Z4V5 671 aaPredicted RBP22.96■■□□□ 1.27
CHRD-202ENST00000348986 YTHDC2Q9H6S0 1430 aaKnown RBP22.96■■□□□ 1.27
CHRD-202ENST00000348986 DEKP35659 375 aaKnown RBP22.95■■□□□ 1.27
CHRD-202ENST00000348986 NGEFQ8N5V2 710 aa22.95■■□□□ 1.26
CHRD-202ENST00000348986 RLBP1P12271 317 aa22.95■■□□□ 1.26
CHRD-202ENST00000348986 MYO5BQ9ULV0 1848 aa22.94■■□□□ 1.26
CHRD-202ENST00000348986 MAPK8IP3Q9UPT6 1336 aa22.94■■□□□ 1.26
CHRD-202ENST00000348986 ARHGEF28Q8N1W1 1705 aaKnown RBP22.93■■□□□ 1.26
CHRD-202ENST00000348986 ZC3H13Q5T200 1668 aaKnown RBP22.92■■□□□ 1.26
CHRD-202ENST00000348986 TXNDC2Q86VQ3 553 aa22.91■■□□□ 1.26
CHRD-202ENST00000348986 NCKAP5LQ9HCH0 1330 aa22.91■■□□□ 1.26
CHRD-202ENST00000348986 WDR63Q8IWG1 891 aa22.91■■□□□ 1.26
CHRD-202ENST00000348986 PDE3AQ14432 1141 aa22.9■■□□□ 1.26
CHRD-202ENST00000348986 PUS7Q96PZ0 661 aaKnown RBP22.9■■□□□ 1.26
CHRD-202ENST00000348986 MYH16Q9H6N6 1097 aa22.9■■□□□ 1.26
CHRD-202ENST00000348986 NUTM2FA1L443 756 aa22.89■■□□□ 1.26
CHRD-202ENST00000348986 ATAD2Q6PL18 1390 aa22.89■■□□□ 1.25
CHRD-202ENST00000348986 ABCC11Q96J66 1382 aa22.89■■□□□ 1.25
CHRD-202ENST00000348986 EXOSC9Q06265 439 aaKnown RBP22.89■■□□□ 1.25
CHRD-202ENST00000348986 FAM161AQ3B820 660 aa22.89■■□□□ 1.25
CHRD-202ENST00000348986 RTL5Q5HYW3 569 aaPredicted RBP22.89■■□□□ 1.25
CHRD-202ENST00000348986 TMPOP42166 694 aaKnown RBP22.88■■□□□ 1.25
CHRD-202ENST00000348986 RIPK4P57078 832 aa22.88■■□□□ 1.25
CHRD-202ENST00000348986 SHPRHQ149N8 1683 aa22.88■■□□□ 1.25
CHRD-202ENST00000348986 DIAPH1O60610 1272 aaKnown RBP22.88■■□□□ 1.25
CHRD-202ENST00000348986 PTPRMP28827 1452 aa22.88■■□□□ 1.25
CHRD-202ENST00000348986 HMOX1P09601 288 aa22.87■■□□□ 1.25
CHRD-202ENST00000348986 C8orf34Q49A92 452 aa22.87■■□□□ 1.25
CHRD-202ENST00000348986 ZRANB1Q9UGI0 708 aa22.87■■□□□ 1.25
CHRD-202ENST00000348986 PREX1Q8TCU6 1659 aa22.86■■□□□ 1.25
CHRD-202ENST00000348986 PHF23Q9BUL5 403 aaPredicted RBP22.86■■□□□ 1.25
CHRD-202ENST00000348986 NSD2O96028 1365 aa22.86■■□□□ 1.25
CHRD-202ENST00000348986 TMEM131LA2VDJ0 1609 aa22.86■■□□□ 1.25
CHRD-202ENST00000348986 SMC4Q9NTJ3 1288 aa22.86■■□□□ 1.25
CHRD-202ENST00000348986 ZFYVE9O95405 1425 aa22.86■■□□□ 1.25
CHRD-202ENST00000348986 FTSJ3Q8IY81 847 aaKnown RBP22.85■■□□□ 1.25
CHRD-202ENST00000348986 PCDHB15Q9Y5E8 787 aa22.85■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms